RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 BSCL2Q96G97 398 aaPredicted RBP11.26□□□□□ -0.61
LIMS1-206ENST00000414829 CCDC140Q96MF4 163 aa11.26□□□□□ -0.61
LIMS1-206ENST00000414829 OR4C12Q96R67 309 aa11.26□□□□□ -0.61
LIMS1-206ENST00000414829 TXN2Q99757 166 aa11.26□□□□□ -0.61
LIMS1-206ENST00000414829 HEYLQ9NQ87 328 aaPredicted RBP11.26□□□□□ -0.61
LIMS1-206ENST00000414829 C21orf62Q9NYP8 219 aa11.26□□□□□ -0.61
LIMS1-206ENST00000414829 PRR13Q9NZ81 148 aa11.26□□□□□ -0.61
LIMS1-206ENST00000414829 HSPB7Q9UBY9 170 aa11.26□□□□□ -0.61
LIMS1-206ENST00000414829 FLVCR2Q9UPI3 526 aa11.26□□□□□ -0.61
LIMS1-206ENST00000414829 MFSD2BA6NFX1 497 aa11.25□□□□□ -0.61
LIMS1-206ENST00000414829 BMPR1BO00238 502 aa11.25□□□□□ -0.61
LIMS1-206ENST00000414829 ANXA7P20073 488 aaKnown RBP11.25□□□□□ -0.61
LIMS1-206ENST00000414829 KLF5Q13887 457 aaPredicted RBP11.25□□□□□ -0.61
LIMS1-206ENST00000414829 FAM106AQ4KMX7 169 aa11.25□□□□□ -0.61
LIMS1-206ENST00000414829 ACSM6Q6P461 480 aa11.25□□□□□ -0.61
LIMS1-206ENST00000414829 CLEC19AQ6UXS0 136 aa11.25□□□□□ -0.61
LIMS1-206ENST00000414829 Q6ZRM9 215 aa11.25□□□□□ -0.61
LIMS1-206ENST00000414829 SLC24A4Q8NFF2 622 aa11.25□□□□□ -0.61
LIMS1-206ENST00000414829 OR9G4Q8NGQ1 327 aa11.25□□□□□ -0.61
LIMS1-206ENST00000414829 CIB3Q96Q77 187 aaPredicted RBP11.25□□□□□ -0.61
LIMS1-206ENST00000414829 TBC1D24Q9ULP9 559 aa11.25□□□□□ -0.61
LIMS1-206ENST00000414829 VWFP04275 2813 aa11.25□□□□□ -0.61
LIMS1-206ENST00000414829 SAP30O75446 220 aa11.24□□□□□ -0.61
LIMS1-206ENST00000414829 H2AFB2P0C5Z0 115 aa11.24□□□□□ -0.61
LIMS1-206ENST00000414829 FCGR2BP31994 310 aaPredicted RBP11.24□□□□□ -0.61
LIMS1-206ENST00000414829 GPR183P32249 361 aa11.24□□□□□ -0.61
LIMS1-206ENST00000414829 SYNJ2BPP57105 145 aa11.24□□□□□ -0.61
LIMS1-206ENST00000414829 EGFEM1PQ0D2K5 195 aa11.24□□□□□ -0.61
LIMS1-206ENST00000414829 SPINK9Q5DT21 86 aa11.24□□□□□ -0.61
LIMS1-206ENST00000414829 PLET1Q6UQ28 207 aa11.24□□□□□ -0.61
LIMS1-206ENST00000414829 RNASEH2CQ8TDP1 164 aaKnown RBP11.24□□□□□ -0.61
LIMS1-206ENST00000414829 DTD1Q8TEA8 209 aa11.24□□□□□ -0.61
LIMS1-206ENST00000414829 MITD1Q8WV92 249 aa11.24□□□□□ -0.61
LIMS1-206ENST00000414829 SIGLEC8Q9NYZ4 499 aa11.24□□□□□ -0.61
LIMS1-206ENST00000414829 DMRT1Q9Y5R6 373 aa11.24□□□□□ -0.61
LIMS1-206ENST00000414829 U3KQ87 197 aa11.24□□□□□ -0.61
LIMS1-206ENST00000414829 K7EIM0 57 aa11.23□□□□□ -0.61
LIMS1-206ENST00000414829 LGALS9O00182 355 aa11.23□□□□□ -0.61
LIMS1-206ENST00000414829 NUPL2O15504 423 aaKnown RBP11.23□□□□□ -0.61
LIMS1-206ENST00000414829 TRBV12-3P01733 135 aa11.23□□□□□ -0.61
LIMS1-206ENST00000414829 CLEC3BP05452 202 aa11.23□□□□□ -0.61
LIMS1-206ENST00000414829 NPBWR1P48145 328 aa11.23□□□□□ -0.61
LIMS1-206ENST00000414829 MFAP4P55083 255 aa11.23□□□□□ -0.61
LIMS1-206ENST00000414829 RPP30P78346 268 aaKnown RBP11.23□□□□□ -0.61
LIMS1-206ENST00000414829 DEFA6Q01524 100 aa11.23□□□□□ -0.61
LIMS1-206ENST00000414829 RELQ04864 619 aaPredicted RBP11.23□□□□□ -0.61
LIMS1-206ENST00000414829 BSXQ3C1V8 233 aa11.23□□□□□ -0.61
LIMS1-206ENST00000414829 C2orf83Q53S99 150 aa11.23□□□□□ -0.61
LIMS1-206ENST00000414829 Q56UQ5 140 aa11.23□□□□□ -0.61
LIMS1-206ENST00000414829 GPHB5Q86YW7 130 aa11.23□□□□□ -0.61
LIMS1-206ENST00000414829 SCARB1Q8WTV0 552 aa11.23□□□□□ -0.61
LIMS1-206ENST00000414829 GPN1Q9HCN4 374 aaPredicted RBP11.23□□□□□ -0.61
LIMS1-206ENST00000414829 PALMDQ9NP74 551 aa11.23□□□□□ -0.61
LIMS1-206ENST00000414829 TRAV6A0A075B6T7 132 aa11.22□□□□□ -0.61
LIMS1-206ENST00000414829 I3L2K1 104 aa11.22□□□□□ -0.61
LIMS1-206ENST00000414829 TGOLN2O43493 480 aa11.22□□□□□ -0.61
LIMS1-206ENST00000414829 PITX3O75364 302 aa11.22□□□□□ -0.61
LIMS1-206ENST00000414829 MT-CO2P00403 227 aa11.22□□□□□ -0.61
LIMS1-206ENST00000414829 HOXB5P09067 269 aa11.22□□□□□ -0.61
LIMS1-206ENST00000414829 RNASE2P10153 161 aaKnown RBP11.22□□□□□ -0.61
LIMS1-206ENST00000414829 NPY1RP25929 384 aa11.22□□□□□ -0.61
LIMS1-206ENST00000414829 OPRK1P41145 380 aa11.22□□□□□ -0.61
LIMS1-206ENST00000414829 MFAP2P55001 183 aa11.22□□□□□ -0.61
LIMS1-206ENST00000414829 GGNBP1Q5YKI7 109 aa11.22□□□□□ -0.61
LIMS1-206ENST00000414829 PVRIGQ6DKI7 326 aa11.22□□□□□ -0.61
LIMS1-206ENST00000414829 ETFRF1Q6IPR1 90 aa11.22□□□□□ -0.61
LIMS1-206ENST00000414829 UBAC2Q8NBM4 344 aa11.22□□□□□ -0.61
LIMS1-206ENST00000414829 DUSP18Q8NEJ0 188 aa11.22□□□□□ -0.61
LIMS1-206ENST00000414829 ZNF431Q8TF32 576 aaPredicted RBP11.22□□□□□ -0.61
LIMS1-206ENST00000414829 PINX1Q96BK5 328 aaKnown RBP11.22□□□□□ -0.61
LIMS1-206ENST00000414829 PKD1L1Q8TDX9 2849 aa11.22□□□□□ -0.61
LIMS1-206ENST00000414829 NOTCH3Q9UM47 2321 aa11.21□□□□□ -0.61
LIMS1-206ENST00000414829 PPP5D1E7EU14 171 aa11.21□□□□□ -0.61
LIMS1-206ENST00000414829 WRBO00258 174 aa11.21□□□□□ -0.61
LIMS1-206ENST00000414829 GNG7O60262 68 aa11.21□□□□□ -0.61
LIMS1-206ENST00000414829 PRAF2O60831 178 aa11.21□□□□□ -0.61
LIMS1-206ENST00000414829 IFNA10P01566 189 aa11.21□□□□□ -0.61
LIMS1-206ENST00000414829 IGHV3-23P01764 117 aa11.21□□□□□ -0.61
LIMS1-206ENST00000414829 SLC25A4P12235 298 aa11.21□□□□□ -0.61
LIMS1-206ENST00000414829 MARC2Q969Z3 335 aa11.21□□□□□ -0.61
LIMS1-206ENST00000414829 UFC1Q9Y3C8 167 aa11.21□□□□□ -0.61
LIMS1-206ENST00000414829 NBEAL1Q6ZS30 2694 aa11.21□□□□□ -0.62
LIMS1-206ENST00000414829 OR2T8A6NH00 312 aa11.2□□□□□ -0.62
LIMS1-206ENST00000414829 A8MWP6 167 aa11.2□□□□□ -0.62
LIMS1-206ENST00000414829 IL5P05113 134 aa11.2□□□□□ -0.62
LIMS1-206ENST00000414829 ELLP55199 621 aaPredicted RBP11.2□□□□□ -0.62
LIMS1-206ENST00000414829 RAB11AP62491 216 aa11.2□□□□□ -0.62
LIMS1-206ENST00000414829 OR2K2Q8NGT1 345 aa11.2□□□□□ -0.62
LIMS1-206ENST00000414829 RBKSQ9H477 322 aa11.2□□□□□ -0.62
LIMS1-206ENST00000414829 S4R3C0 116 aa11.2□□□□□ -0.62
LIMS1-206ENST00000414829 NDUFA4O00483 81 aa11.19□□□□□ -0.62
LIMS1-206ENST00000414829 SYNGR2O43760 224 aa11.19□□□□□ -0.62
LIMS1-206ENST00000414829 NXPH3O95157 252 aa11.19□□□□□ -0.62
LIMS1-206ENST00000414829 OR2C1O95371 312 aa11.19□□□□□ -0.62
LIMS1-206ENST00000414829 NKX2-1P43699 371 aaPredicted RBP11.19□□□□□ -0.62
LIMS1-206ENST00000414829 LCN12Q6JVE5 192 aa11.19□□□□□ -0.62
LIMS1-206ENST00000414829 DYNLRB2Q8TF09 96 aa11.19□□□□□ -0.62
LIMS1-206ENST00000414829 DAZ1Q9NQZ3 744 aaKnown RBP11.19□□□□□ -0.62
LIMS1-206ENST00000414829 TRAV30A0A087WSZ9 112 aa11.18□□□□□ -0.62
LIMS1-206ENST00000414829 ZNF320A2RRD8 509 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms