RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 XCL2Q9UBD3 114 aa4.41□□□□□ -1.7
LINC00396-201ENST00000411690 MGAT4AQ9UM21 535 aa4.41□□□□□ -1.7
LINC00396-201ENST00000411690 RBM7Q9Y580 266 aaKnown RBP4.41□□□□□ -1.7
LINC00396-201ENST00000411690 PUS1Q9Y606 427 aaKnown RBP eCLIP4.41□□□□□ -1.7
LINC00396-201ENST00000411690 TRAV14DV4A0A0A6YYC5 116 aa4.4□□□□□ -1.71
LINC00396-201ENST00000411690 TRAV2A0A0B4J234 112 aa4.4□□□□□ -1.71
LINC00396-201ENST00000411690 A0A1W2PPQ1 181 aa4.4□□□□□ -1.71
LINC00396-201ENST00000411690 SMIM9A6NGZ8 99 aa4.4□□□□□ -1.71
LINC00396-201ENST00000411690 LINC00473A8K010 186 aa4.4□□□□□ -1.71
LINC00396-201ENST00000411690 PTGES3LE9PB15 166 aa4.4□□□□□ -1.71
LINC00396-201ENST00000411690 NUPL2O15504 423 aaKnown RBP4.4□□□□□ -1.71
LINC00396-201ENST00000411690 ST8SIA3O43173 380 aa4.4□□□□□ -1.71
LINC00396-201ENST00000411690 WBP4O75554 376 aaKnown RBP4.4□□□□□ -1.71
LINC00396-201ENST00000411690 YIF1AO95070 293 aa4.4□□□□□ -1.71
LINC00396-201ENST00000411690 EIF4EP06730 217 aaKnown RBP4.4□□□□□ -1.71
LINC00396-201ENST00000411690 HSMCR30P0CW71 290 aa4.4□□□□□ -1.71
LINC00396-201ENST00000411690 IGFBP3P17936 291 aaPredicted RBP4.4□□□□□ -1.71
LINC00396-201ENST00000411690 GCSHP23434 173 aa4.4□□□□□ -1.71
LINC00396-201ENST00000411690 DUTP33316 252 aaKnown RBP4.4□□□□□ -1.71
LINC00396-201ENST00000411690 MAS1LP35410 378 aa4.4□□□□□ -1.71
LINC00396-201ENST00000411690 ETV6P41212 452 aa4.4□□□□□ -1.71
LINC00396-201ENST00000411690 OR2B8PP59922 312 aa4.4□□□□□ -1.71
LINC00396-201ENST00000411690 DAD1P61803 113 aa4.4□□□□□ -1.71
LINC00396-201ENST00000411690 CLINT1Q14677 625 aa4.4□□□□□ -1.71
LINC00396-201ENST00000411690 SPCS2Q15005 226 aa4.4□□□□□ -1.71
LINC00396-201ENST00000411690 ACSM3Q53FZ2 586 aa4.4□□□□□ -1.71
LINC00396-201ENST00000411690 HSD17B12Q53GQ0 312 aa4.4□□□□□ -1.71
LINC00396-201ENST00000411690 VKORC1L1Q8N0U8 176 aa4.4□□□□□ -1.71
LINC00396-201ENST00000411690 LILRB2Q8N423 598 aa4.4□□□□□ -1.71
LINC00396-201ENST00000411690 UBAC2Q8NBM4 344 aa4.4□□□□□ -1.71
LINC00396-201ENST00000411690 VSTM2AQ8TAG5 236 aa4.4□□□□□ -1.71
LINC00396-201ENST00000411690 GGHQ92820 318 aa4.4□□□□□ -1.71
LINC00396-201ENST00000411690 UFD1Q92890 307 aa4.4□□□□□ -1.71
LINC00396-201ENST00000411690 C5orf30Q96GV9 206 aa4.4□□□□□ -1.71
LINC00396-201ENST00000411690 ZNF414Q96IQ9 312 aa4.4□□□□□ -1.71
LINC00396-201ENST00000411690 DERL3Q96Q80 235 aa4.4□□□□□ -1.71
LINC00396-201ENST00000411690 CCDC90BQ9GZT6 254 aa4.4□□□□□ -1.71
LINC00396-201ENST00000411690 RHBDL2Q9NX52 303 aa4.4□□□□□ -1.71
LINC00396-201ENST00000411690 RABAC1Q9UI14 185 aa4.4□□□□□ -1.71
LINC00396-201ENST00000411690 PSORS1C1Q9UIG5 152 aa4.4□□□□□ -1.71
LINC00396-201ENST00000411690 RFNGQ9Y644 331 aa4.4□□□□□ -1.71
LINC00396-201ENST00000411690 A0A075B6Q4 140 aa4.39□□□□□ -1.71
LINC00396-201ENST00000411690 IGHV3OR16-12A0A075B7B8 117 aa4.39□□□□□ -1.71
LINC00396-201ENST00000411690 TRBV6-6A0A0A6YYG2 114 aa4.39□□□□□ -1.71
LINC00396-201ENST00000411690 IGKV1-6A0A0C4DH72 117 aa4.39□□□□□ -1.71
LINC00396-201ENST00000411690 ZNF705FA8MVS1 300 aaPredicted RBP4.39□□□□□ -1.71
LINC00396-201ENST00000411690 RAB27BO00194 218 aa4.39□□□□□ -1.71
LINC00396-201ENST00000411690 CYB5BO43169 146 aa4.39□□□□□ -1.71
LINC00396-201ENST00000411690 FCGR3BO75015 233 aa4.39□□□□□ -1.71
LINC00396-201ENST00000411690 ARL6IP5O75915 188 aa4.39□□□□□ -1.71
LINC00396-201ENST00000411690 KBTBD11O94819 623 aa4.39□□□□□ -1.71
LINC00396-201ENST00000411690 PTTG1O95997 202 aa4.39□□□□□ -1.71
LINC00396-201ENST00000411690 CDK1P06493 297 aa4.39□□□□□ -1.71
LINC00396-201ENST00000411690 CD3GP09693 182 aa4.39□□□□□ -1.71
LINC00396-201ENST00000411690 ZNF705DP0CH99 300 aaPredicted RBP4.39□□□□□ -1.71
LINC00396-201ENST00000411690 ZNF705BP0CI00 300 aaPredicted RBP4.39□□□□□ -1.71
LINC00396-201ENST00000411690 CD36P16671 472 aa4.39□□□□□ -1.71
LINC00396-201ENST00000411690 HTR2CP28335 458 aa4.39□□□□□ -1.71
LINC00396-201ENST00000411690 GNRHRP30968 328 aa4.39□□□□□ -1.71
LINC00396-201ENST00000411690 FGF9P31371 208 aaPredicted RBP4.39□□□□□ -1.71
LINC00396-201ENST00000411690 TALDO1P37837 337 aa4.39□□□□□ -1.71
LINC00396-201ENST00000411690 RELQ04864 619 aaPredicted RBP4.39□□□□□ -1.71
LINC00396-201ENST00000411690 ARFRP1Q13795 201 aa4.39□□□□□ -1.71
LINC00396-201ENST00000411690 P2RY14Q15391 338 aa4.39□□□□□ -1.71
LINC00396-201ENST00000411690 RAB11BQ15907 218 aa4.39□□□□□ -1.71
LINC00396-201ENST00000411690 Q56UQ5 140 aa4.39□□□□□ -1.71
LINC00396-201ENST00000411690 RNASE12Q5GAN4 147 aaKnown RBP4.39□□□□□ -1.71
LINC00396-201ENST00000411690 ZNF705AQ6ZN79 300 aaPredicted RBP4.39□□□□□ -1.71
LINC00396-201ENST00000411690 LRRTM1Q86UE6 522 aa4.39□□□□□ -1.71
LINC00396-201ENST00000411690 TMEM167AQ8TBQ9 72 aa4.39□□□□□ -1.71
LINC00396-201ENST00000411690 ST8SIA2Q92186 375 aa4.39□□□□□ -1.71
LINC00396-201ENST00000411690 PHYHIPQ92561 330 aa4.39□□□□□ -1.71
LINC00396-201ENST00000411690 OR10C1Q96KK4 312 aa4.39□□□□□ -1.71
LINC00396-201ENST00000411690 ATP6V0BQ99437 205 aa4.39□□□□□ -1.71
LINC00396-201ENST00000411690 CCDC32Q9BV29 185 aa4.39□□□□□ -1.71
LINC00396-201ENST00000411690 SLIRPQ9GZT3 109 aaKnown RBP4.39□□□□□ -1.71
LINC00396-201ENST00000411690 ZNF586Q9NXT0 402 aa4.39□□□□□ -1.71
LINC00396-201ENST00000411690 C21orf62Q9NYP8 219 aa4.39□□□□□ -1.71
LINC00396-201ENST00000411690 hCG_2014768A0A024R1R8 64 aa4.38□□□□□ -1.71
LINC00396-201ENST00000411690 IGHV3-21A0A0B4J1V1 117 aa4.38□□□□□ -1.71
LINC00396-201ENST00000411690 UPK1BO75841 260 aa4.38□□□□□ -1.71
LINC00396-201ENST00000411690 LALBAP00709 142 aa4.38□□□□□ -1.71
LINC00396-201ENST00000411690 CTSGP08311 255 aa4.38□□□□□ -1.71
LINC00396-201ENST00000411690 ZNF688P0C7X2 276 aa4.38□□□□□ -1.71
LINC00396-201ENST00000411690 P0C879 139 aa4.38□□□□□ -1.71
LINC00396-201ENST00000411690 GADD45AP24522 165 aa4.38□□□□□ -1.71
LINC00396-201ENST00000411690 MYL9P24844 172 aa4.38□□□□□ -1.71
LINC00396-201ENST00000411690 PSMA1P25786 263 aaKnown RBP4.38□□□□□ -1.71
LINC00396-201ENST00000411690 PSMB9P28065 219 aa4.38□□□□□ -1.71
LINC00396-201ENST00000411690 S100A5P33763 92 aa4.38□□□□□ -1.71
LINC00396-201ENST00000411690 ASIPP42127 132 aa4.38□□□□□ -1.71
LINC00396-201ENST00000411690 LINC00315P59091 139 aa4.38□□□□□ -1.71
LINC00396-201ENST00000411690 RPL8P62917 257 aaKnown RBP4.38□□□□□ -1.71
LINC00396-201ENST00000411690 TRAM1Q15629 374 aa4.38□□□□□ -1.71
LINC00396-201ENST00000411690 NDUFA5Q16718 116 aa4.38□□□□□ -1.71
LINC00396-201ENST00000411690 OR10K2Q6IF99 312 aa4.38□□□□□ -1.71
LINC00396-201ENST00000411690 SLC25A24Q6NUK1 477 aa4.38□□□□□ -1.71
LINC00396-201ENST00000411690 Q6ZRN7 208 aaPredicted RBP4.38□□□□□ -1.71
LINC00396-201ENST00000411690 NUDT10Q8NFP7 164 aa4.38□□□□□ -1.71
LINC00396-201ENST00000411690 OR56B1Q8NGI3 324 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms