RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 TNCP24821 2201 aa4.42□□□□□ -1.7
EPHA4-202ENST00000409854 AKAP6Q13023 2319 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 B4DSR2 109 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 RRHO14718 337 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 NPFFO15130 113 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 MOSP00540 346 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 SCGB1A1P11684 91 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 GATA3P23771 443 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 CDC34P49427 236 aaPredicted RBP4.41□□□□□ -1.7
EPHA4-202ENST00000409854 DLK1P80370 383 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 SSBP2P81877 361 aaPredicted RBP4.41□□□□□ -1.7
EPHA4-202ENST00000409854 C2orf83Q53S99 150 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 PVRIGQ6DKI7 326 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 OR10P1Q8NGE3 313 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 PSMG3Q9BT73 122 aaPredicted RBP4.41□□□□□ -1.7
EPHA4-202ENST00000409854 TMEM147Q9BVK8 224 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 COMMD5Q9GZQ3 224 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 WDR61Q9GZS3 305 aaKnown RBP4.41□□□□□ -1.7
EPHA4-202ENST00000409854 E7EUB6 86 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 FNDC10F2Z333 226 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 FBXO24O75426 580 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 IFNA5P01569 189 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 NPY1RP25929 384 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 SAA4P35542 130 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 LGALS4P56470 323 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 SNRPEP62304 92 aaKnown RBP4.41□□□□□ -1.7
EPHA4-202ENST00000409854 FBLN7Q53RD9 439 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 OR8G2PQ6IF36 304 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 PPP1R27Q86WC6 154 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 ZNF114Q8NC26 417 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 LYPD6BQ8NI32 183 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 SMIM12Q96EX1 92 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 EAF1Q96JC9 268 aaPredicted RBP4.41□□□□□ -1.7
EPHA4-202ENST00000409854 CSTL1Q9H114 145 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 ENY2Q9NPA8 101 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 TIMM9Q9Y5J7 89 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 IGHV1-69DA0A0B4J2H0 117 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 A0A1W2PRD5 423 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 A0A1W2PRF3 423 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 A0A1W2PRM7 423 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 FAM74A7A6NL05 159 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 AP4M1O00189 453 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 NBR2O15453 112 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 CA2P00918 260 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 IGKV1D-33P01593 117 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 IGKV1-33P01594 117 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 IGHV1-69P01742 117 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 APOC3P02656 99 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 RNASE2P10153 161 aaKnown RBP4.41□□□□□ -1.7
EPHA4-202ENST00000409854 S100A2P29034 98 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 COMPP49747 757 aaPredicted RBP4.41□□□□□ -1.7
EPHA4-202ENST00000409854 RAB11AP62491 216 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 PJVKQ0ZLH3 352 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 PSG3Q16557 428 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 FAM74A3Q4VXF1 159 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 C10orf91Q5T1B1 145 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 OR2G3Q8NGZ4 309 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 OR2T10Q8NGZ9 312 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 NUDT11Q96G61 164 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 TMEM208Q9BTX3 173 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 PRDM13Q9H4Q3 707 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 PARP11Q9NR21 331 aa4.41□□□□□ -1.7
EPHA4-202ENST00000409854 CARHSP1Q9Y2V2 147 aaKnown RBP4.41□□□□□ -1.7
EPHA4-202ENST00000409854 TACC2O95359 2948 aa4.4□□□□□ -1.7
EPHA4-202ENST00000409854 IGLC7A0M8Q6 106 aa4.4□□□□□ -1.7
EPHA4-202ENST00000409854 UMAD1C9J7I0 102 aa4.4□□□□□ -1.7
EPHA4-202ENST00000409854 CRYBA1P05813 215 aa4.4□□□□□ -1.7
EPHA4-202ENST00000409854 ZNF25P17030 456 aaPredicted RBP4.4□□□□□ -1.7
EPHA4-202ENST00000409854 F2RL1P55085 397 aa4.4□□□□□ -1.7
EPHA4-202ENST00000409854 RUNX1Q01196 453 aa4.4□□□□□ -1.7
EPHA4-202ENST00000409854 WT1-ASQ06250 92 aa4.4□□□□□ -1.7
EPHA4-202ENST00000409854 SCGB2A2Q13296 93 aa4.4□□□□□ -1.7
EPHA4-202ENST00000409854 GUK1Q16774 197 aa4.4□□□□□ -1.7
EPHA4-202ENST00000409854 C10orf55Q5SWW7 151 aa4.4□□□□□ -1.7
EPHA4-202ENST00000409854 C1QL4Q86Z23 238 aa4.4□□□□□ -1.7
EPHA4-202ENST00000409854 LINC01356Q8N9X3 169 aa4.4□□□□□ -1.7
EPHA4-202ENST00000409854 OR10W1Q8NGF6 305 aa4.4□□□□□ -1.7
EPHA4-202ENST00000409854 TAF15Q92804 592 aaKnown RBP eCLIP4.4□□□□□ -1.7
EPHA4-202ENST00000409854 SRSF8Q9BRL6 282 aaKnown RBP4.4□□□□□ -1.7
EPHA4-202ENST00000409854 TUBA4BQ9H853 241 aa4.4□□□□□ -1.7
EPHA4-202ENST00000409854 UQCC1Q9NVA1 299 aa4.4□□□□□ -1.7
EPHA4-202ENST00000409854 WDR83OSQ9Y284 106 aa4.4□□□□□ -1.7
EPHA4-202ENST00000409854 ANKRD17O75179 2603 aaKnown RBP4.4□□□□□ -1.7
EPHA4-202ENST00000409854 VPS13CQ709C8 3753 aa4.4□□□□□ -1.7
EPHA4-202ENST00000409854 UBE2L5PA0A1B0GUS4 154 aa4.4□□□□□ -1.71
EPHA4-202ENST00000409854 A0A1B0GV50 99 aa4.4□□□□□ -1.71
EPHA4-202ENST00000409854 TEX22C9J3V5 150 aa4.4□□□□□ -1.71
EPHA4-202ENST00000409854 M0R143 59 aa4.4□□□□□ -1.71
EPHA4-202ENST00000409854 NBEAP1P0C6P0 100 aa4.4□□□□□ -1.71
EPHA4-202ENST00000409854 Q5PR19 223 aa4.4□□□□□ -1.71
EPHA4-202ENST00000409854 BTNL8Q6UX41 500 aa4.4□□□□□ -1.71
EPHA4-202ENST00000409854 DPPA3Q6W0C5 159 aa4.4□□□□□ -1.71
EPHA4-202ENST00000409854 FBXL15Q9H469 300 aa4.4□□□□□ -1.71
EPHA4-202ENST00000409854 RFNGQ9Y644 331 aa4.4□□□□□ -1.71
EPHA4-202ENST00000409854 PRRC2AP48634 2157 aaKnown RBP4.4□□□□□ -1.71
EPHA4-202ENST00000409854 ZNF705EA8MWA4 302 aaPredicted RBP4.4□□□□□ -1.71
EPHA4-202ENST00000409854 J3QLI3 93 aa4.4□□□□□ -1.71
EPHA4-202ENST00000409854 RPL27AP46776 148 aaKnown RBP4.4□□□□□ -1.71
EPHA4-202ENST00000409854 SERF2P84101 59 aa4.4□□□□□ -1.71
EPHA4-202ENST00000409854 AKR1C1Q04828 323 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms