RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 C10orf99Q6UWK7 81 aa15.97■□□□□ 0.15
VSX1-203ENST00000409285 TMEM14EPQ6UXP3 125 aa15.97■□□□□ 0.15
VSX1-203ENST00000409285 C19orf35Q6ZS72 473 aa15.97■□□□□ 0.15
VSX1-203ENST00000409285 NECAP1Q8NC96 275 aa15.97■□□□□ 0.15
VSX1-203ENST00000409285 OR5AU1Q8NGC0 362 aa15.97■□□□□ 0.15
VSX1-203ENST00000409285 OR4X2Q8NGF9 303 aa15.97■□□□□ 0.15
VSX1-203ENST00000409285 THAP6Q8TBB0 222 aa15.97■□□□□ 0.15
VSX1-203ENST00000409285 RNASEH2CQ8TDP1 164 aaKnown RBP15.97■□□□□ 0.15
VSX1-203ENST00000409285 OR4C12Q96R67 309 aa15.97■□□□□ 0.15
VSX1-203ENST00000409285 MBD2Q9UBB5 411 aa15.97■□□□□ 0.15
VSX1-203ENST00000409285 FAM223BA6NKX1 122 aa15.96■□□□□ 0.14
VSX1-203ENST00000409285 H3BP45 60 aa15.96■□□□□ 0.14
VSX1-203ENST00000409285 SCAF4O95104 1147 aaKnown RBP15.96■□□□□ 0.14
VSX1-203ENST00000409285 P2RY1P47900 373 aa15.96■□□□□ 0.14
VSX1-203ENST00000409285 SPANXN5Q5MJ07 72 aa15.96■□□□□ 0.14
VSX1-203ENST00000409285 FAM223AQ8IWN6 122 aa15.96■□□□□ 0.14
VSX1-203ENST00000409285 PRH1P02810 166 aa15.95■□□□□ 0.14
VSX1-203ENST00000409285 SLC25A4P12235 298 aa15.95■□□□□ 0.14
VSX1-203ENST00000409285 RAB9AP51151 201 aa15.95■□□□□ 0.14
VSX1-203ENST00000409285 RAB11AP62491 216 aa15.95■□□□□ 0.14
VSX1-203ENST00000409285 EXOSC2Q13868 293 aaKnown RBP15.95■□□□□ 0.14
VSX1-203ENST00000409285 AWAT1Q58HT5 328 aa15.95■□□□□ 0.14
VSX1-203ENST00000409285 Q5BKY6 102 aa15.95■□□□□ 0.14
VSX1-203ENST00000409285 WFDC12Q8WWY7 111 aa15.95■□□□□ 0.14
VSX1-203ENST00000409285 TRGV3P03979 118 aa15.94■□□□□ 0.14
VSX1-203ENST00000409285 HNRNPCP07910 306 aaKnown RBP eCLIP15.94■□□□□ 0.14
VSX1-203ENST00000409285 PF4V1P10720 104 aa15.94■□□□□ 0.14
VSX1-203ENST00000409285 RHOGP84095 191 aa15.94■□□□□ 0.14
VSX1-203ENST00000409285 ZFP69Q49AA0 526 aa15.94■□□□□ 0.14
VSX1-203ENST00000409285 TMEM65Q6PI78 240 aa15.94■□□□□ 0.14
VSX1-203ENST00000409285 USMG5Q96IX5 58 aa15.94■□□□□ 0.14
VSX1-203ENST00000409285 KLK15Q9H2R5 256 aa15.94■□□□□ 0.14
VSX1-203ENST00000409285 ZNF355PQ9NSJ1 428 aa15.94■□□□□ 0.14
VSX1-203ENST00000409285 PRSS46E5RG02 174 aa15.93■□□□□ 0.14
VSX1-203ENST00000409285 BOLA2-SMG1P6H3BVE0 249 aa15.93■□□□□ 0.14
VSX1-203ENST00000409285 OR8U8P0C7N1 319 aa15.93■□□□□ 0.14
VSX1-203ENST00000409285 CAV2P51636 162 aa15.93■□□□□ 0.14
VSX1-203ENST00000409285 TPPP2P59282 170 aa15.93■□□□□ 0.14
VSX1-203ENST00000409285 TCTEX1D4Q5JR98 221 aa15.93■□□□□ 0.14
VSX1-203ENST00000409285 SLC25A24Q6NUK1 477 aa15.93■□□□□ 0.14
VSX1-203ENST00000409285 TMEM252Q8N6L7 170 aa15.93■□□□□ 0.14
VSX1-203ENST00000409285 PPP1R14BQ96C90 147 aa15.93■□□□□ 0.14
VSX1-203ENST00000409285 STAB1Q9NY15 2570 aa15.93■□□□□ 0.14
VSX1-203ENST00000409285 A0A0G2JLM5 398 aa15.92■□□□□ 0.14
VSX1-203ENST00000409285 PMS2P5A8MQ11 134 aa15.92■□□□□ 0.14
VSX1-203ENST00000409285 KIAA0141Q14154 515 aaPredicted RBP15.92■□□□□ 0.14
VSX1-203ENST00000409285 VN1R17PQ8TDU5 208 aa15.92■□□□□ 0.14
VSX1-203ENST00000409285 MS4A10Q96PG2 267 aa15.92■□□□□ 0.14
VSX1-203ENST00000409285 I3L2K1 104 aa15.91■□□□□ 0.14
VSX1-203ENST00000409285 K7EIM0 57 aa15.91■□□□□ 0.14
VSX1-203ENST00000409285 HAX1O00165 279 aa15.91■□□□□ 0.14
VSX1-203ENST00000409285 OR2J3O76001 311 aa15.91■□□□□ 0.14
VSX1-203ENST00000409285 IFNA4P05014 189 aa15.91■□□□□ 0.14
VSX1-203ENST00000409285 BAXQ07812 192 aa15.91■□□□□ 0.14
VSX1-203ENST00000409285 C15orf32Q32M92 178 aa15.91■□□□□ 0.14
VSX1-203ENST00000409285 ETV3LQ6ZN32 361 aa15.91■□□□□ 0.14
VSX1-203ENST00000409285 STX12Q86Y82 276 aa15.91■□□□□ 0.14
VSX1-203ENST00000409285 DCUN1D4Q92564 292 aa15.91■□□□□ 0.14
VSX1-203ENST00000409285 CXorf58Q96LI9 332 aa15.91■□□□□ 0.14
VSX1-203ENST00000409285 UBE2E2Q96LR5 201 aa15.91■□□□□ 0.14
VSX1-203ENST00000409285 ATP6V0BQ99437 205 aa15.91■□□□□ 0.14
VSX1-203ENST00000409285 SLC25A31Q9H0C2 315 aa15.91■□□□□ 0.14
VSX1-203ENST00000409285 FBXL7Q9UJT9 491 aa15.91■□□□□ 0.14
VSX1-203ENST00000409285 C1QBP02746 253 aa15.91■□□□□ 0.14
VSX1-203ENST00000409285 RPLP1P05386 114 aaKnown RBP15.91■□□□□ 0.14
VSX1-203ENST00000409285 METTL15P1P0C7V9 234 aa15.91■□□□□ 0.14
VSX1-203ENST00000409285 SULT1A1P50225 295 aa15.91■□□□□ 0.14
VSX1-203ENST00000409285 ZNF491Q8N8L2 437 aa15.91■□□□□ 0.14
VSX1-203ENST00000409285 CACNG8Q8WXS5 425 aa15.91■□□□□ 0.14
VSX1-203ENST00000409285 MISP3Q96FF7 219 aa15.91■□□□□ 0.14
VSX1-203ENST00000409285 AQP10Q96PS8 301 aa15.91■□□□□ 0.14
VSX1-203ENST00000409285 RPS10-NUDT3A0A1W2PQS6 291 aa15.9■□□□□ 0.14
VSX1-203ENST00000409285 IGSF23A1L1A6 192 aa15.9■□□□□ 0.14
VSX1-203ENST00000409285 FAM24AA6NFZ4 105 aa15.9■□□□□ 0.14
VSX1-203ENST00000409285 NDUFB8O95169 186 aa15.9■□□□□ 0.14
VSX1-203ENST00000409285 MT-CO2P00403 227 aa15.9■□□□□ 0.14
VSX1-203ENST00000409285 FCGR2BP31994 310 aaPredicted RBP15.9■□□□□ 0.14
VSX1-203ENST00000409285 GPX4P36969 197 aaPredicted RBP15.9■□□□□ 0.14
VSX1-203ENST00000409285 OPRK1P41145 380 aa15.9■□□□□ 0.14
VSX1-203ENST00000409285 CD69Q07108 199 aa15.9■□□□□ 0.14
VSX1-203ENST00000409285 ETFRF1Q6IPR1 90 aa15.9■□□□□ 0.14
VSX1-203ENST00000409285 FNDC4Q9H6D8 234 aaPredicted RBP15.9■□□□□ 0.14
VSX1-203ENST00000409285 TNFSF18Q9UNG2 199 aa15.9■□□□□ 0.14
VSX1-203ENST00000409285 HMSDA8MTL9 139 aa15.89■□□□□ 0.13
VSX1-203ENST00000409285 RPL12P30050 165 aaKnown RBP15.89■□□□□ 0.13
VSX1-203ENST00000409285 CDX1P47902 265 aaPredicted RBP15.89■□□□□ 0.13
VSX1-203ENST00000409285 EWSR1Q01844 656 aaKnown RBP eCLIP15.89■□□□□ 0.13
VSX1-203ENST00000409285 FAM209BQ5JX69 171 aa15.89■□□□□ 0.13
VSX1-203ENST00000409285 LCNL1Q6ZST4 164 aa15.89■□□□□ 0.13
VSX1-203ENST00000409285 ZNF546Q86UE3 836 aa15.89■□□□□ 0.13
VSX1-203ENST00000409285 HAPLN4Q86UW8 402 aa15.89■□□□□ 0.13
VSX1-203ENST00000409285 SCARB1Q8WTV0 552 aa15.89■□□□□ 0.13
VSX1-203ENST00000409285 GGACTQ9BVM4 153 aa15.89■□□□□ 0.13
VSX1-203ENST00000409285 FXYD6-FXYD2A0A087WZ82 144 aa15.88■□□□□ 0.13
VSX1-203ENST00000409285 TRBV7-1A0A0A6YYK4 115 aa15.88■□□□□ 0.13
VSX1-203ENST00000409285 MFSD2BA6NFX1 497 aa15.88■□□□□ 0.13
VSX1-203ENST00000409285 FNDC10F2Z333 226 aa15.88■□□□□ 0.13
VSX1-203ENST00000409285 CD28P10747 220 aa15.88■□□□□ 0.13
VSX1-203ENST00000409285 KRTAP10-3P60369 221 aa15.88■□□□□ 0.13
VSX1-203ENST00000409285 ATP5G2Q06055 141 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms