RNA–Protein interactions for RNA: ENST00000399352.5

ITSN1-209, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-209ENST00000399352 TPTE2P1Q5T6R2 138 aa13.52□□□□□ -0.25
ITSN1-209ENST00000399352 LURAP1LQ8IV03 231 aa13.52□□□□□ -0.25
ITSN1-209ENST00000399352 PLPPR1Q8TBJ4 325 aa13.52□□□□□ -0.25
ITSN1-209ENST00000399352 ZNF837Q96EG3 531 aaPredicted RBP13.52□□□□□ -0.25
ITSN1-209ENST00000399352 ATP1A1-AS1Q5TC04 95 aa13.52□□□□□ -0.25
ITSN1-209ENST00000399352 DMRTC2Q8IXT2 367 aaPredicted RBP13.52□□□□□ -0.25
ITSN1-209ENST00000399352 CACNG8Q8WXS5 425 aa13.52□□□□□ -0.25
ITSN1-209ENST00000399352 ANKRD31Q8N7Z5 1873 aa13.51□□□□□ -0.25
ITSN1-209ENST00000399352 RAMP3O60896 148 aa13.51□□□□□ -0.25
ITSN1-209ENST00000399352 C1orf194Q5T5A4 169 aa13.51□□□□□ -0.25
ITSN1-209ENST00000399352 SMRP1Q8NCR6 262 aa13.51□□□□□ -0.25
ITSN1-209ENST00000399352 EPDR1Q9UM22 224 aa13.51□□□□□ -0.25
ITSN1-209ENST00000399352 ST20Q9HBF5 79 aa13.51□□□□□ -0.25
ITSN1-209ENST00000399352 OTORQ9NRC9 128 aa13.51□□□□□ -0.25
ITSN1-209ENST00000399352 PTPRFP10586 1907 aa13.51□□□□□ -0.25
ITSN1-209ENST00000399352 RBMY1BA6NDE4 496 aaKnown RBP13.51□□□□□ -0.25
ITSN1-209ENST00000399352 RBMY1EA6NEQ0 496 aaKnown RBP13.51□□□□□ -0.25
ITSN1-209ENST00000399352 C5orf67F2Z3F1 127 aa13.51□□□□□ -0.25
ITSN1-209ENST00000399352 IGKV1D-33P01593 117 aa13.51□□□□□ -0.25
ITSN1-209ENST00000399352 IGKV1-33P01594 117 aa13.51□□□□□ -0.25
ITSN1-209ENST00000399352 RBMY1DP0C7P1 496 aaKnown RBP13.51□□□□□ -0.25
ITSN1-209ENST00000399352 RBMY1A1P0DJD3 496 aaKnown RBP13.51□□□□□ -0.25
ITSN1-209ENST00000399352 RBMY1CP0DJD4 496 aa13.51□□□□□ -0.25
ITSN1-209ENST00000399352 GAGE2BQ13066 116 aa13.51□□□□□ -0.25
ITSN1-209ENST00000399352 GAGE2EQ4V326 116 aa13.51□□□□□ -0.25
ITSN1-209ENST00000399352 GAGE2DQ9UEU5 116 aa13.51□□□□□ -0.25
ITSN1-209ENST00000399352 A0A0U1RRA0 63 aa13.5□□□□□ -0.25
ITSN1-209ENST00000399352 IGKCP01834 107 aa13.5□□□□□ -0.25
ITSN1-209ENST00000399352 PRTN3P24158 256 aa13.5□□□□□ -0.25
ITSN1-209ENST00000399352 GTSF1LQ9H1H1 148 aa13.5□□□□□ -0.25
ITSN1-209ENST00000399352 KIAA1217Q5T5P2 1943 aa13.5□□□□□ -0.25
ITSN1-209ENST00000399352 TRBV6-7A0A0A0MS04 114 aa13.5□□□□□ -0.25
ITSN1-209ENST00000399352 TMEM256Q8N2U0 113 aa13.5□□□□□ -0.25
ITSN1-209ENST00000399352 IFI27L1Q96BM0 104 aa13.5□□□□□ -0.25
ITSN1-209ENST00000399352 ARHGEF17Q96PE2 2063 aaPredicted RBP13.5□□□□□ -0.25
ITSN1-209ENST00000399352 TRAV21A0A0B4J279 112 aa13.5□□□□□ -0.25
ITSN1-209ENST00000399352 PRR32B1ATL7 298 aa13.5□□□□□ -0.25
ITSN1-209ENST00000399352 TIAF1O95411 115 aa13.5□□□□□ -0.25
ITSN1-209ENST00000399352 DUX3Q96PT4 197 aa13.5□□□□□ -0.25
ITSN1-209ENST00000399352 RNF115Q9Y4L5 304 aa13.5□□□□□ -0.25
ITSN1-209ENST00000399352 ABCA3Q99758 1704 aa13.5□□□□□ -0.25
ITSN1-209ENST00000399352 SCN8AQ9UQD0 1980 aa13.5□□□□□ -0.25
ITSN1-209ENST00000399352 KBTBD11-OT1A0A1B0GTJ5 212 aa13.5□□□□□ -0.25
ITSN1-209ENST00000399352 FABP5P3A8MUU1 101 aa13.5□□□□□ -0.25
ITSN1-209ENST00000399352 SRSF6Q13247 344 aaKnown RBP13.5□□□□□ -0.25
ITSN1-209ENST00000399352 CLEC19AQ6UXS0 136 aa13.5□□□□□ -0.25
ITSN1-209ENST00000399352 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.5□□□□□ -0.25
ITSN1-209ENST00000399352 IGKV1D-8A0A087WSZ0 117 aa13.49□□□□□ -0.25
ITSN1-209ENST00000399352 FTH1P19P0C7X4 201 aa13.49□□□□□ -0.25
ITSN1-209ENST00000399352 ID3Q02535 119 aa13.49□□□□□ -0.25
ITSN1-209ENST00000399352 KIF13BQ9NQT8 1826 aa13.49□□□□□ -0.25
ITSN1-209ENST00000399352 IGHV3-64A0A075B6Q5 118 aa13.49□□□□□ -0.25
ITSN1-209ENST00000399352 CELA3AP09093 270 aa13.49□□□□□ -0.25
ITSN1-209ENST00000399352 GLMPQ8WWB7 406 aa13.49□□□□□ -0.25
ITSN1-209ENST00000399352 A0A0G2JLM5 398 aa13.49□□□□□ -0.25
ITSN1-209ENST00000399352 EFNB3Q15768 340 aa13.49□□□□□ -0.25
ITSN1-209ENST00000399352 C1orf53Q5VUE5 145 aa13.49□□□□□ -0.25
ITSN1-209ENST00000399352 REG4Q9BYZ8 158 aa13.49□□□□□ -0.25
ITSN1-209ENST00000399352 SRSF1Q07955 248 aaKnown RBP eCLIP13.49□□□□□ -0.25
ITSN1-209ENST00000399352 CD300EQ496F6 205 aaPredicted RBP13.49□□□□□ -0.25
ITSN1-209ENST00000399352 LCN12Q6JVE5 192 aa13.49□□□□□ -0.25
ITSN1-209ENST00000399352 CYSLTR1Q9Y271 337 aa13.49□□□□□ -0.25
ITSN1-209ENST00000399352 CHTOPQ9Y3Y2 248 aaKnown RBP13.49□□□□□ -0.25
ITSN1-209ENST00000399352 SLC25A15Q9Y619 301 aa13.49□□□□□ -0.25
ITSN1-209ENST00000399352 TIMP3P35625 211 aa13.48□□□□□ -0.25
ITSN1-209ENST00000399352 TMPRSS3P57727 454 aa13.48□□□□□ -0.25
ITSN1-209ENST00000399352 ZFAND6Q6FIF0 208 aa13.48□□□□□ -0.25
ITSN1-209ENST00000399352 IGKV1-9A0A0C4DH69 117 aa13.48□□□□□ -0.25
ITSN1-209ENST00000399352 J3QW42 95 aa13.48□□□□□ -0.25
ITSN1-209ENST00000399352 CENPVQ7Z7K6 275 aaPredicted RBP13.48□□□□□ -0.25
ITSN1-209ENST00000399352 GFI1Q99684 422 aa13.48□□□□□ -0.25
ITSN1-209ENST00000399352 LSM4Q9Y4Z0 139 aaKnown RBP13.48□□□□□ -0.25
ITSN1-209ENST00000399352 TRIP12Q14669 1992 aaPredicted RBP13.48□□□□□ -0.25
ITSN1-209ENST00000399352 CEP250Q9BV73 2442 aa13.48□□□□□ -0.25
ITSN1-209ENST00000399352 CECR9P0C854 216 aa13.48□□□□□ -0.25
ITSN1-209ENST00000399352 GTSCR1Q86UQ5 136 aa13.48□□□□□ -0.25
ITSN1-209ENST00000399352 CHCHD1Q96BP2 118 aaKnown RBP13.48□□□□□ -0.25
ITSN1-209ENST00000399352 TGFBR3LH3BV60 316 aa13.48□□□□□ -0.25
ITSN1-209ENST00000399352 CD33P20138 364 aa13.48□□□□□ -0.25
ITSN1-209ENST00000399352 IFI27P40305 119 aaPredicted RBP13.48□□□□□ -0.25
ITSN1-209ENST00000399352 PRB3Q04118 309 aaPredicted RBP13.48□□□□□ -0.25
ITSN1-209ENST00000399352 Q6ZT83 130 aa13.48□□□□□ -0.25
ITSN1-209ENST00000399352 REPIN1Q9BWE0 567 aaKnown RBP13.48□□□□□ -0.25
ITSN1-209ENST00000399352 CYTL1Q9NRR1 136 aa13.48□□□□□ -0.25
ITSN1-209ENST00000399352 TMEM242Q9NWH2 141 aa13.48□□□□□ -0.25
ITSN1-209ENST00000399352 hDV102S1A0JD36 115 aa13.47□□□□□ -0.25
ITSN1-209ENST00000399352 TMEM155Q4W5P6 130 aa13.47□□□□□ -0.25
ITSN1-209ENST00000399352 MPV17L2Q567V2 206 aa13.47□□□□□ -0.25
ITSN1-209ENST00000399352 RNF182Q8N6D2 247 aa13.47□□□□□ -0.25
ITSN1-209ENST00000399352 C1QTNF5Q9BXJ0 243 aa13.47□□□□□ -0.25
ITSN1-209ENST00000399352 NXT2Q9NPJ8 142 aaKnown RBP13.47□□□□□ -0.25
ITSN1-209ENST00000399352 DPM3Q9P2X0 92 aa13.47□□□□□ -0.25
ITSN1-209ENST00000399352 A0A087X0K7 114 aa13.47□□□□□ -0.25
ITSN1-209ENST00000399352 LINC00114Q6XXX2 140 aa13.47□□□□□ -0.25
ITSN1-209ENST00000399352 PAQR4Q8N4S7 273 aaPredicted RBP13.47□□□□□ -0.25
ITSN1-209ENST00000399352 KIR3DL3Q8N743 410 aa13.47□□□□□ -0.25
ITSN1-209ENST00000399352 ITLN2Q8WWU7 325 aaPredicted RBP13.47□□□□□ -0.25
ITSN1-209ENST00000399352 TRPM3Q9HCF6 1732 aaPredicted RBP13.47□□□□□ -0.25
ITSN1-209ENST00000399352 DOCK5Q9H7D0 1870 aa13.47□□□□□ -0.25
ITSN1-209ENST00000399352 PSG7Q13046 419 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms