RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 IGHV2-26A0A0B4J1V2 119 aa12.27□□□□□ -0.44
COL25A1-201ENST00000399126 ZNF705GA8MUZ8 300 aaPredicted RBP12.27□□□□□ -0.44
COL25A1-201ENST00000399126 GCGP01275 180 aa12.27□□□□□ -0.44
COL25A1-201ENST00000399126 ATP6V0CP27449 155 aa12.27□□□□□ -0.44
COL25A1-201ENST00000399126 CEBPGP53567 150 aa12.27□□□□□ -0.44
COL25A1-201ENST00000399126 SELENOTP62341 195 aa12.27□□□□□ -0.44
COL25A1-201ENST00000399126 SRSF1Q07955 248 aaKnown RBP eCLIP12.27□□□□□ -0.44
COL25A1-201ENST00000399126 ADTRPQ96IZ2 230 aa12.27□□□□□ -0.44
COL25A1-201ENST00000399126 C20orf24Q9BUV8 137 aa12.27□□□□□ -0.44
COL25A1-201ENST00000399126 PATZ1Q9HBE1 687 aaKnown RBP12.27□□□□□ -0.44
COL25A1-201ENST00000399126 NBPF19A0A087WUL8 3843 aa12.27□□□□□ -0.44
COL25A1-201ENST00000399126 USP9YO00507 2555 aaPredicted RBP12.27□□□□□ -0.45
COL25A1-201ENST00000399126 ABCA2Q9BZC7 2435 aa12.27□□□□□ -0.45
COL25A1-201ENST00000399126 H0YJW9 148 aa12.27□□□□□ -0.45
COL25A1-201ENST00000399126 GPR6P46095 362 aaPredicted RBP12.27□□□□□ -0.45
COL25A1-201ENST00000399126 TENM4Q6N022 2769 aa12.27□□□□□ -0.45
COL25A1-201ENST00000399126 IGHV3-72A0A0B4J1Y9 119 aa12.26□□□□□ -0.45
COL25A1-201ENST00000399126 C20orf202A1L168 122 aa12.26□□□□□ -0.45
COL25A1-201ENST00000399126 COMPP49747 757 aaPredicted RBP12.26□□□□□ -0.45
COL25A1-201ENST00000399126 SULT1A2P50226 295 aa12.26□□□□□ -0.45
COL25A1-201ENST00000399126 ARF6P62330 175 aa12.26□□□□□ -0.45
COL25A1-201ENST00000399126 OR5I1Q13606 314 aa12.26□□□□□ -0.45
COL25A1-201ENST00000399126 TMEM14EPQ6UXP3 125 aa12.26□□□□□ -0.45
COL25A1-201ENST00000399126 TMEM182Q6ZP80 229 aaPredicted RBP12.26□□□□□ -0.45
COL25A1-201ENST00000399126 LINC00311Q8N616 119 aa12.26□□□□□ -0.45
COL25A1-201ENST00000399126 IGFBPL1Q8WX77 278 aa12.26□□□□□ -0.45
COL25A1-201ENST00000399126 RAB39BQ96DA2 213 aa12.26□□□□□ -0.45
COL25A1-201ENST00000399126 ATP5SQ99766 215 aa12.26□□□□□ -0.45
COL25A1-201ENST00000399126 NABP2Q9BQ15 211 aa12.26□□□□□ -0.45
COL25A1-201ENST00000399126 ABCA12Q86UK0 2595 aa12.26□□□□□ -0.45
COL25A1-201ENST00000399126 EFNA4P52798 201 aa12.26□□□□□ -0.45
COL25A1-201ENST00000399126 ZNF266Q14584 549 aa12.26□□□□□ -0.45
COL25A1-201ENST00000399126 ATP6V1FQ16864 119 aa12.26□□□□□ -0.45
COL25A1-201ENST00000399126 Q8N7P7 452 aa12.26□□□□□ -0.45
COL25A1-201ENST00000399126 C8orf46Q8TAG6 207 aa12.26□□□□□ -0.45
COL25A1-201ENST00000399126 SSBP3Q9BWW4 388 aaPredicted RBP12.26□□□□□ -0.45
COL25A1-201ENST00000399126 CSTL1Q9H114 145 aa12.26□□□□□ -0.45
COL25A1-201ENST00000399126 PTPN13Q12923 2485 aa12.26□□□□□ -0.45
COL25A1-201ENST00000399126 IL6RP08887 468 aaPredicted RBP12.25□□□□□ -0.45
COL25A1-201ENST00000399126 ZFP36P26651 326 aaKnown RBP12.25□□□□□ -0.45
COL25A1-201ENST00000399126 BRS3P32247 399 aa12.25□□□□□ -0.45
COL25A1-201ENST00000399126 TAS2R30P59541 319 aa12.25□□□□□ -0.45
COL25A1-201ENST00000399126 RTL8BQ17RB0 113 aa12.25□□□□□ -0.45
COL25A1-201ENST00000399126 LY6G5BQ8NDX9 201 aa12.25□□□□□ -0.45
COL25A1-201ENST00000399126 OR5AN1Q8NGI8 311 aa12.25□□□□□ -0.45
COL25A1-201ENST00000399126 TBL2Q9Y4P3 447 aaKnown RBP12.25□□□□□ -0.45
COL25A1-201ENST00000399126 TNFRSF18Q9Y5U5 241 aa12.25□□□□□ -0.45
COL25A1-201ENST00000399126 SEC11BP0C7V7 166 aa12.25□□□□□ -0.45
COL25A1-201ENST00000399126 Q6ZRG5 221 aa12.25□□□□□ -0.45
COL25A1-201ENST00000399126 RITA1Q96K30 269 aa12.25□□□□□ -0.45
COL25A1-201ENST00000399126 GEMIN7Q9H840 131 aaKnown RBP12.25□□□□□ -0.45
COL25A1-201ENST00000399126 C15orf61A6NNL5 157 aa12.24□□□□□ -0.45
COL25A1-201ENST00000399126 OVOL3O00110 214 aa12.24□□□□□ -0.45
COL25A1-201ENST00000399126 IGLV1-47P01700 117 aa12.24□□□□□ -0.45
COL25A1-201ENST00000399126 LDLRAD2Q5SZI1 272 aa12.24□□□□□ -0.45
COL25A1-201ENST00000399126 C8orf31Q8N9H6 132 aa12.24□□□□□ -0.45
COL25A1-201ENST00000399126 TMEM186Q96B77 213 aa12.24□□□□□ -0.45
COL25A1-201ENST00000399126 BPESC1Q9GZL8 116 aa12.24□□□□□ -0.45
COL25A1-201ENST00000399126 ZNF430Q9H8G1 570 aaPredicted RBP12.24□□□□□ -0.45
COL25A1-201ENST00000399126 PMS2P5A8MQ11 134 aa12.24□□□□□ -0.45
COL25A1-201ENST00000399126 IGHV4-39P01824 125 aa12.24□□□□□ -0.45
COL25A1-201ENST00000399126 SAA1P0DJI8 122 aaPredicted RBP12.24□□□□□ -0.45
COL25A1-201ENST00000399126 KLRD1Q13241 179 aa12.24□□□□□ -0.45
COL25A1-201ENST00000399126 PNKDQ8N490 385 aa12.24□□□□□ -0.45
COL25A1-201ENST00000399126 HARBI1Q96MB7 349 aa12.24□□□□□ -0.45
COL25A1-201ENST00000399126 KMT2BQ9UMN6 2715 aaPredicted RBP12.24□□□□□ -0.45
COL25A1-201ENST00000399126 A0A1W2PPV4 95 aa12.24□□□□□ -0.45
COL25A1-201ENST00000399126 FAM90A9PA6NNJ1 464 aa12.24□□□□□ -0.45
COL25A1-201ENST00000399126 ZNF137PP52743 207 aa12.24□□□□□ -0.45
COL25A1-201ENST00000399126 HERV-K104P63124 156 aa12.24□□□□□ -0.45
COL25A1-201ENST00000399126 SLC38A11Q08AI6 406 aa12.24□□□□□ -0.45
COL25A1-201ENST00000399126 HLA-DRB5Q30154 266 aa12.24□□□□□ -0.45
COL25A1-201ENST00000399126 OR2G3Q8NGZ4 309 aa12.24□□□□□ -0.45
COL25A1-201ENST00000399126 VPS25Q9BRG1 176 aa12.24□□□□□ -0.45
COL25A1-201ENST00000399126 RSG1Q9BU20 258 aa12.24□□□□□ -0.45
COL25A1-201ENST00000399126 TCF19Q9Y242 345 aa12.24□□□□□ -0.45
COL25A1-201ENST00000399126 ANKRD17O75179 2603 aaKnown RBP12.23□□□□□ -0.45
COL25A1-201ENST00000399126 LOC105371242A0A075B767 164 aa12.23□□□□□ -0.45
COL25A1-201ENST00000399126 C15orf62A8K5M9 175 aa12.23□□□□□ -0.45
COL25A1-201ENST00000399126 F8WDY8 70 aa12.23□□□□□ -0.45
COL25A1-201ENST00000399126 AGPAT2O15120 278 aa12.23□□□□□ -0.45
COL25A1-201ENST00000399126 HRASP01112 189 aa12.23□□□□□ -0.45
COL25A1-201ENST00000399126 APOA2P02652 100 aa12.23□□□□□ -0.45
COL25A1-201ENST00000399126 RPL29P47914 159 aaKnown RBP12.23□□□□□ -0.45
COL25A1-201ENST00000399126 BTNL8Q6UX41 500 aa12.23□□□□□ -0.45
COL25A1-201ENST00000399126 COMMD1Q8N668 190 aa12.23□□□□□ -0.45
COL25A1-201ENST00000399126 NRGNQ92686 78 aa12.23□□□□□ -0.45
COL25A1-201ENST00000399126 CLEC7AQ9BXN2 247 aa12.23□□□□□ -0.45
COL25A1-201ENST00000399126 TMEM14BQ9NUH8 114 aa12.23□□□□□ -0.45
COL25A1-201ENST00000399126 UBE2L5PA0A1B0GUS4 154 aa12.23□□□□□ -0.45
COL25A1-201ENST00000399126 A0A1B0GV50 99 aa12.23□□□□□ -0.45
COL25A1-201ENST00000399126 A1L4Q6 167 aa12.23□□□□□ -0.45
COL25A1-201ENST00000399126 PTTG1IPP53801 180 aa12.23□□□□□ -0.45
COL25A1-201ENST00000399126 POU2AF1Q16633 256 aa12.23□□□□□ -0.45
COL25A1-201ENST00000399126 OR4P4Q8NGL7 312 aa12.23□□□□□ -0.45
COL25A1-201ENST00000399126 TMEM170AQ8WVE7 144 aa12.23□□□□□ -0.45
COL25A1-201ENST00000399126 ALKBH7Q9BT30 221 aaPredicted RBP12.23□□□□□ -0.45
COL25A1-201ENST00000399126 PITPNC1Q9UKF7 332 aa12.23□□□□□ -0.45
COL25A1-201ENST00000399126 A0A1W2PRD5 423 aa12.22□□□□□ -0.45
COL25A1-201ENST00000399126 A0A1W2PRF3 423 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms