RNA–Protein interactions for RNA: ENST00000397876.6

SNRNP25-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 3

Gene SNRNP25, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-203ENST00000397876 GINS3Q9BRX5 216 aa10.55□□□□□ -0.72
SNRNP25-203ENST00000397876 IGKV3-7A0A075B6H7 116 aa10.54□□□□□ -0.72
SNRNP25-203ENST00000397876 NCS1P62166 190 aa10.54□□□□□ -0.72
SNRNP25-203ENST00000397876 PAFAH1B2P68402 229 aa10.54□□□□□ -0.72
SNRNP25-203ENST00000397876 ZNF414Q96IQ9 312 aa10.54□□□□□ -0.72
SNRNP25-203ENST00000397876 MPTX1A8MV57 137 aa10.53□□□□□ -0.72
SNRNP25-203ENST00000397876 M0QYG6 137 aa10.53□□□□□ -0.72
SNRNP25-203ENST00000397876 IGHV3-48P01763 117 aa10.53□□□□□ -0.72
SNRNP25-203ENST00000397876 CD5P06127 495 aa10.53□□□□□ -0.72
SNRNP25-203ENST00000397876 PGAM2P15259 253 aa10.53□□□□□ -0.72
SNRNP25-203ENST00000397876 ELK1P19419 428 aa10.53□□□□□ -0.72
SNRNP25-203ENST00000397876 SNCAP37840 140 aa10.53□□□□□ -0.72
SNRNP25-203ENST00000397876 NPBWR1P48145 328 aa10.53□□□□□ -0.72
SNRNP25-203ENST00000397876 AKR1C2P52895 323 aa10.53□□□□□ -0.72
SNRNP25-203ENST00000397876 ZNF124Q15973 351 aa10.53□□□□□ -0.72
SNRNP25-203ENST00000397876 SLC35G3Q8N808 338 aa10.53□□□□□ -0.72
SNRNP25-203ENST00000397876 GATAD1Q8WUU5 269 aa10.53□□□□□ -0.72
SNRNP25-203ENST00000397876 ZNF486Q96H40 463 aaPredicted RBP10.53□□□□□ -0.72
SNRNP25-203ENST00000397876 FUNDC2Q9BWH2 189 aa10.53□□□□□ -0.72
SNRNP25-203ENST00000397876 CSTL1Q9H114 145 aa10.53□□□□□ -0.72
SNRNP25-203ENST00000397876 IGHV3OR16-13A0A075B7E8 117 aa10.52□□□□□ -0.73
SNRNP25-203ENST00000397876 IGHV3-74A0A0B4J1X5 117 aa10.52□□□□□ -0.73
SNRNP25-203ENST00000397876 HPGDSO60760 199 aa10.52□□□□□ -0.73
SNRNP25-203ENST00000397876 ATG12O94817 140 aa10.52□□□□□ -0.73
SNRNP25-203ENST00000397876 RND3P61587 244 aa10.52□□□□□ -0.73
SNRNP25-203ENST00000397876 VBP1P61758 197 aa10.52□□□□□ -0.73
SNRNP25-203ENST00000397876 SPINK9Q5DT21 86 aa10.52□□□□□ -0.73
SNRNP25-203ENST00000397876 RNASE10Q5GAN6 216 aaKnown RBP10.52□□□□□ -0.73
SNRNP25-203ENST00000397876 FAM90A2PQ658T7 463 aa10.52□□□□□ -0.73
SNRNP25-203ENST00000397876 TCF24Q7RTU0 167 aa10.52□□□□□ -0.73
SNRNP25-203ENST00000397876 GBGT1Q8N5D6 347 aa10.52□□□□□ -0.73
SNRNP25-203ENST00000397876 DUSP18Q8NEJ0 188 aa10.52□□□□□ -0.73
SNRNP25-203ENST00000397876 PDCD10Q9BUL8 212 aa10.52□□□□□ -0.73
SNRNP25-203ENST00000397876 FAM25AB3EWG3 89 aa10.51□□□□□ -0.73
SNRNP25-203ENST00000397876 FAM25CB3EWG5 89 aa10.51□□□□□ -0.73
SNRNP25-203ENST00000397876 FAM25GB3EWG6 89 aa10.51□□□□□ -0.73
SNRNP25-203ENST00000397876 ST8SIA3O43173 380 aa10.51□□□□□ -0.73
SNRNP25-203ENST00000397876 PIGPP57054 158 aa10.51□□□□□ -0.73
SNRNP25-203ENST00000397876 IZUMO4Q1ZYL8 232 aa10.51□□□□□ -0.73
SNRNP25-203ENST00000397876 RNASE12Q5GAN4 147 aaKnown RBP10.51□□□□□ -0.73
SNRNP25-203ENST00000397876 MZT2AQ6P582 158 aa10.51□□□□□ -0.73
SNRNP25-203ENST00000397876 TOMM20LQ6UXN7 152 aa10.51□□□□□ -0.73
SNRNP25-203ENST00000397876 ZNF600Q6ZNG1 722 aa10.51□□□□□ -0.73
SNRNP25-203ENST00000397876 ARRDC1Q8N5I2 433 aa10.51□□□□□ -0.73
SNRNP25-203ENST00000397876 PHLDA1Q8WV24 401 aaPredicted RBP10.51□□□□□ -0.73
SNRNP25-203ENST00000397876 RARRES2Q99969 163 aa10.51□□□□□ -0.73
SNRNP25-203ENST00000397876 INS-IGF2F8WCM5 200 aa10.5□□□□□ -0.73
SNRNP25-203ENST00000397876 DNASE2O00115 360 aaPredicted RBP10.5□□□□□ -0.73
SNRNP25-203ENST00000397876 CORTO00230 105 aa10.5□□□□□ -0.73
SNRNP25-203ENST00000397876 IFNA17P01571 189 aa10.5□□□□□ -0.73
SNRNP25-203ENST00000397876 IGKV1-5P01602 117 aa10.5□□□□□ -0.73
SNRNP25-203ENST00000397876 PI3P19957 117 aa10.5□□□□□ -0.73
SNRNP25-203ENST00000397876 TBPP20226 339 aa10.5□□□□□ -0.73
SNRNP25-203ENST00000397876 HOXA1P49639 335 aaPredicted RBP10.5□□□□□ -0.73
SNRNP25-203ENST00000397876 RORCP51449 518 aa10.5□□□□□ -0.73
SNRNP25-203ENST00000397876 SUB1P53999 127 aaKnown RBP eCLIP10.5□□□□□ -0.73
SNRNP25-203ENST00000397876 TRIM16LQ309B1 348 aa10.5□□□□□ -0.73
SNRNP25-203ENST00000397876 LHFPL1Q86WI0 220 aa10.5□□□□□ -0.73
SNRNP25-203ENST00000397876 ST8SIA2Q92186 375 aa10.5□□□□□ -0.73
SNRNP25-203ENST00000397876 AP3S1Q92572 193 aa10.5□□□□□ -0.73
SNRNP25-203ENST00000397876 TP53RKQ96S44 253 aa10.5□□□□□ -0.73
SNRNP25-203ENST00000397876 TMEM231Q9H6L2 316 aa10.5□□□□□ -0.73
SNRNP25-203ENST00000397876 VSIRQ9H7M9 311 aa10.5□□□□□ -0.73
SNRNP25-203ENST00000397876 PUS1Q9Y606 427 aaKnown RBP eCLIP10.5□□□□□ -0.73
SNRNP25-203ENST00000397876 TRAV2A0A0B4J234 112 aa10.49□□□□□ -0.73
SNRNP25-203ENST00000397876 C3orf85A0A1B0GTC6 90 aa10.49□□□□□ -0.73
SNRNP25-203ENST00000397876 SCGB2A1O75556 95 aa10.49□□□□□ -0.73
SNRNP25-203ENST00000397876 DFFBO76075 338 aa10.49□□□□□ -0.73
SNRNP25-203ENST00000397876 CA1P00915 261 aaPredicted RBP10.49□□□□□ -0.73
SNRNP25-203ENST00000397876 P0C879 139 aa10.49□□□□□ -0.73
SNRNP25-203ENST00000397876 PPP5CP53041 499 aa10.49□□□□□ -0.73
SNRNP25-203ENST00000397876 RPL11P62913 178 aaKnown RBP10.49□□□□□ -0.73
SNRNP25-203ENST00000397876 CCDC71LQ8N9Z2 235 aa10.49□□□□□ -0.73
SNRNP25-203ENST00000397876 RNASE11Q8TAA1 199 aaKnown RBP10.49□□□□□ -0.73
SNRNP25-203ENST00000397876 MFFQ9GZY8 342 aa10.49□□□□□ -0.73
SNRNP25-203ENST00000397876 MS4A6AQ9H2W1 248 aa10.49□□□□□ -0.73
SNRNP25-203ENST00000397876 C11orf68Q9H3H3 251 aaKnown RBP10.49□□□□□ -0.73
SNRNP25-203ENST00000397876 ZFAND3Q9H8U3 227 aa10.49□□□□□ -0.73
SNRNP25-203ENST00000397876 ENY2Q9NPA8 101 aa10.49□□□□□ -0.73
SNRNP25-203ENST00000397876 COPZ2Q9P299 210 aa10.49□□□□□ -0.73
SNRNP25-203ENST00000397876 KLK11Q9UBX7 282 aa10.49□□□□□ -0.73
SNRNP25-203ENST00000397876 A0A0B4J293 547 aa10.48□□□□□ -0.73
SNRNP25-203ENST00000397876 IGHV3-66A0A0C4DH42 116 aa10.48□□□□□ -0.73
SNRNP25-203ENST00000397876 APOHP02749 345 aaPredicted RBP10.48□□□□□ -0.73
SNRNP25-203ENST00000397876 CD3DP04234 171 aa10.48□□□□□ -0.73
SNRNP25-203ENST00000397876 RNASE2P10153 161 aaKnown RBP10.48□□□□□ -0.73
SNRNP25-203ENST00000397876 OR11H2Q8NH07 326 aa10.48□□□□□ -0.73
SNRNP25-203ENST00000397876 OR52I2Q8NH67 350 aa10.48□□□□□ -0.73
SNRNP25-203ENST00000397876 ZFAND1Q8TCF1 268 aa10.48□□□□□ -0.73
SNRNP25-203ENST00000397876 RRNAD1Q96FB5 475 aaKnown RBP10.48□□□□□ -0.73
SNRNP25-203ENST00000397876 EXTL2Q9UBQ6 330 aa10.48□□□□□ -0.73
SNRNP25-203ENST00000397876 A0A1B0GU03 582 aa10.47□□□□□ -0.73
SNRNP25-203ENST00000397876 A0A1W2PS18 150 aa10.47□□□□□ -0.73
SNRNP25-203ENST00000397876 TMEM50AO95807 157 aa10.47□□□□□ -0.73
SNRNP25-203ENST00000397876 OPRK1P41145 380 aa10.47□□□□□ -0.73
SNRNP25-203ENST00000397876 DEFB131AP59861 70 aa10.47□□□□□ -0.73
SNRNP25-203ENST00000397876 TMEM187Q14656 261 aa10.47□□□□□ -0.73
SNRNP25-203ENST00000397876 RBMS2Q15434 407 aaKnown RBP10.47□□□□□ -0.73
SNRNP25-203ENST00000397876 LEMD1Q68G75 181 aa10.47□□□□□ -0.73
SNRNP25-203ENST00000397876 PVRIGQ6DKI7 326 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms