RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 ERVK-16P61578 105 aa15.54■□□□□ 0.08
PDLIM2-204ENST00000397760 PDLIM3Q53GG5 364 aaPredicted RBP15.54■□□□□ 0.08
PDLIM2-204ENST00000397760 ACSM6Q6P461 480 aa15.54■□□□□ 0.08
PDLIM2-204ENST00000397760 SSX9Q7RTT3 188 aa15.54■□□□□ 0.08
PDLIM2-204ENST00000397760 SLC16A13Q7RTY0 426 aa15.54■□□□□ 0.08
PDLIM2-204ENST00000397760 VKORC1L1Q8N0U8 176 aa15.54■□□□□ 0.08
PDLIM2-204ENST00000397760 FAM210BQ96KR6 192 aa15.54■□□□□ 0.08
PDLIM2-204ENST00000397760 TBL2Q9Y4P3 447 aaKnown RBP15.54■□□□□ 0.08
PDLIM2-204ENST00000397760 A0A1W2PPI3 338 aa15.54■□□□□ 0.08
PDLIM2-204ENST00000397760 CYB5BO43169 146 aa15.54■□□□□ 0.08
PDLIM2-204ENST00000397760 KBTBD11O94819 623 aa15.54■□□□□ 0.08
PDLIM2-204ENST00000397760 IGKV1D-33P01593 117 aa15.54■□□□□ 0.08
PDLIM2-204ENST00000397760 IGKV1-33P01594 117 aa15.54■□□□□ 0.08
PDLIM2-204ENST00000397760 CD81P60033 236 aa15.54■□□□□ 0.08
PDLIM2-204ENST00000397760 OR10G9Q8NGN4 311 aa15.54■□□□□ 0.08
PDLIM2-204ENST00000397760 OR10G7Q8NGN6 311 aa15.54■□□□□ 0.08
PDLIM2-204ENST00000397760 OR52E5Q8NH55 327 aa15.54■□□□□ 0.08
PDLIM2-204ENST00000397760 FLYWCH2Q96CP2 140 aaKnown RBP15.54■□□□□ 0.08
PDLIM2-204ENST00000397760 NPCDR1Q9BY65 106 aa15.54■□□□□ 0.08
PDLIM2-204ENST00000397760 NIT2Q9NQR4 276 aa15.54■□□□□ 0.08
PDLIM2-204ENST00000397760 DOK5Q9P104 306 aa15.54■□□□□ 0.08
PDLIM2-204ENST00000397760 WNK2Q9Y3S1 2297 aa15.54■□□□□ 0.08
PDLIM2-204ENST00000397760 TGIF2-C20orf24A0A0A6YYL0 155 aa15.53■□□□□ 0.08
PDLIM2-204ENST00000397760 SEC14L6B5MCN3 397 aa15.53■□□□□ 0.08
PDLIM2-204ENST00000397760 MPDU1O75352 247 aa15.53■□□□□ 0.08
PDLIM2-204ENST00000397760 HRASP01112 189 aa15.53■□□□□ 0.08
PDLIM2-204ENST00000397760 SSX2Q16385 188 aa15.53■□□□□ 0.08
PDLIM2-204ENST00000397760 TMEM241Q24JQ0 296 aa15.53■□□□□ 0.08
PDLIM2-204ENST00000397760 OR4C13Q8NGP0 309 aa15.53■□□□□ 0.08
PDLIM2-204ENST00000397760 OSR1Q8TAX0 266 aaPredicted RBP15.53■□□□□ 0.08
PDLIM2-204ENST00000397760 RHOVQ96L33 236 aa15.53■□□□□ 0.08
PDLIM2-204ENST00000397760 GGACTQ9BVM4 153 aa15.53■□□□□ 0.08
PDLIM2-204ENST00000397760 HECTD1Q9ULT8 2610 aa15.52■□□□□ 0.08
PDLIM2-204ENST00000397760 SMCO3A2RU48 225 aa15.52■□□□□ 0.08
PDLIM2-204ENST00000397760 NPFFO15130 113 aa15.52■□□□□ 0.08
PDLIM2-204ENST00000397760 FABP1P07148 127 aa15.52■□□□□ 0.08
PDLIM2-204ENST00000397760 TMEM177Q53S58 311 aa15.52■□□□□ 0.08
PDLIM2-204ENST00000397760 HARBI1Q96MB7 349 aa15.52■□□□□ 0.08
PDLIM2-204ENST00000397760 URGCP-MRPS24S4R325 110 aa15.52■□□□□ 0.08
PDLIM2-204ENST00000397760 PRRC2AP48634 2157 aaKnown RBP15.52■□□□□ 0.07
PDLIM2-204ENST00000397760 IGHV3OR16-10A0A075B7F0 116 aa15.52■□□□□ 0.07
PDLIM2-204ENST00000397760 IGHV1-69DA0A0B4J2H0 117 aa15.52■□□□□ 0.07
PDLIM2-204ENST00000397760 SRRM4A7MD48 611 aaKnown RBP15.52■□□□□ 0.07
PDLIM2-204ENST00000397760 OOSP1A8MZH6 123 aa15.52■□□□□ 0.07
PDLIM2-204ENST00000397760 TIMM23O14925 209 aa15.52■□□□□ 0.07
PDLIM2-204ENST00000397760 IGHV1-69P01742 117 aa15.52■□□□□ 0.07
PDLIM2-204ENST00000397760 SAA4P35542 130 aa15.52■□□□□ 0.07
PDLIM2-204ENST00000397760 RPS16P62249 146 aaKnown RBP15.52■□□□□ 0.07
PDLIM2-204ENST00000397760 ACOT6Q3I5F7 207 aaPredicted RBP15.52■□□□□ 0.07
PDLIM2-204ENST00000397760 FFAR4Q5NUL3 377 aa15.52■□□□□ 0.07
PDLIM2-204ENST00000397760 SMIM7Q9BQ49 75 aa15.52■□□□□ 0.07
PDLIM2-204ENST00000397760 GSN-AS1Q9NRJ2 163 aa15.52■□□□□ 0.07
PDLIM2-204ENST00000397760 TMEM140Q9NV12 185 aa15.52■□□□□ 0.07
PDLIM2-204ENST00000397760 PDZD2O15018 2839 aa15.51■□□□□ 0.07
PDLIM2-204ENST00000397760 MAP1AP78559 2803 aaPredicted RBP15.51■□□□□ 0.07
PDLIM2-204ENST00000397760 TRAV40A0A0B4J280 105 aa15.51■□□□□ 0.07
PDLIM2-204ENST00000397760 HIST1H2BKO60814 126 aa15.51■□□□□ 0.07
PDLIM2-204ENST00000397760 HIST1H2BJP06899 126 aa15.51■□□□□ 0.07
PDLIM2-204ENST00000397760 OR9G9P0C7N8 305 aa15.51■□□□□ 0.07
PDLIM2-204ENST00000397760 HIST1H2BOP23527 126 aa15.51■□□□□ 0.07
PDLIM2-204ENST00000397760 HIST1H2BBP33778 126 aa15.51■□□□□ 0.07
PDLIM2-204ENST00000397760 HIST1H2BDP58876 126 aa15.51■□□□□ 0.07
PDLIM2-204ENST00000397760 SPCS3P61009 180 aa15.51■□□□□ 0.07
PDLIM2-204ENST00000397760 HIST1H2BCP62807 126 aa15.51■□□□□ 0.07
PDLIM2-204ENST00000397760 POU2AF1Q16633 256 aa15.51■□□□□ 0.07
PDLIM2-204ENST00000397760 HIST2H2BEQ16778 126 aa15.51■□□□□ 0.07
PDLIM2-204ENST00000397760 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.51■□□□□ 0.07
PDLIM2-204ENST00000397760 CCDC144NLQ6NUI1 221 aa15.51■□□□□ 0.07
PDLIM2-204ENST00000397760 DYNAPQ8N1N2 210 aa15.51■□□□□ 0.07
PDLIM2-204ENST00000397760 PIP4P2Q8N4L2 257 aa15.51■□□□□ 0.07
PDLIM2-204ENST00000397760 HIST1H2BHQ93079 126 aa15.51■□□□□ 0.07
PDLIM2-204ENST00000397760 HIST1H2BNQ99877 126 aa15.51■□□□□ 0.07
PDLIM2-204ENST00000397760 HIST1H2BMQ99879 126 aa15.51■□□□□ 0.07
PDLIM2-204ENST00000397760 GAR1Q9NY12 217 aaKnown RBP15.51■□□□□ 0.07
PDLIM2-204ENST00000397760 WDR83OSQ9Y284 106 aa15.51■□□□□ 0.07
PDLIM2-204ENST00000397760 J3QLI3 93 aa15.5■□□□□ 0.07
PDLIM2-204ENST00000397760 RBMXL2O75526 392 aaKnown RBP15.5■□□□□ 0.07
PDLIM2-204ENST00000397760 VENTXO95231 258 aa15.5■□□□□ 0.07
PDLIM2-204ENST00000397760 AVPP01185 164 aa15.5■□□□□ 0.07
PDLIM2-204ENST00000397760 S100A2P29034 98 aa15.5■□□□□ 0.07
PDLIM2-204ENST00000397760 NDUFA6P56556 154 aa15.5■□□□□ 0.07
PDLIM2-204ENST00000397760 OR4A47Q6IF82 309 aa15.5■□□□□ 0.07
PDLIM2-204ENST00000397760 CIARTQ8N365 385 aaPredicted RBP15.5■□□□□ 0.07
PDLIM2-204ENST00000397760 ZDHHC16Q969W1 377 aa15.5■□□□□ 0.07
PDLIM2-204ENST00000397760 AJUBAQ96IF1 538 aa15.5■□□□□ 0.07
PDLIM2-204ENST00000397760 PYGO2Q9BRQ0 406 aa15.5■□□□□ 0.07
PDLIM2-204ENST00000397760 C15orf62A8K5M9 175 aa15.5■□□□□ 0.07
PDLIM2-204ENST00000397760 DNLZQ5SXM8 178 aa15.5■□□□□ 0.07
PDLIM2-204ENST00000397760 RUSC1-AS1Q66K80 236 aa15.5■□□□□ 0.07
PDLIM2-204ENST00000397760 CYB5R2Q6BCY4 276 aa15.5■□□□□ 0.07
PDLIM2-204ENST00000397760 TRGC2P03986 189 aa15.49■□□□□ 0.07
PDLIM2-204ENST00000397760 IGHV4-38-2P0DP08 117 aa15.49■□□□□ 0.07
PDLIM2-204ENST00000397760 CD1BP29016 333 aa15.49■□□□□ 0.07
PDLIM2-204ENST00000397760 BSXQ3C1V8 233 aa15.49■□□□□ 0.07
PDLIM2-204ENST00000397760 CFHR4Q92496 578 aa15.49■□□□□ 0.07
PDLIM2-204ENST00000397760 RAB24Q969Q5 203 aa15.49■□□□□ 0.07
PDLIM2-204ENST00000397760 RITA1Q96K30 269 aa15.49■□□□□ 0.07
PDLIM2-204ENST00000397760 SLC25A22Q9H936 323 aa15.49■□□□□ 0.07
PDLIM2-204ENST00000397760 CSMD1Q96PZ7 3565 aa15.49■□□□□ 0.07
PDLIM2-204ENST00000397760 TRAV3A0A0B4J244 114 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms