RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 RARRES2Q99969 163 aa13.01□□□□□ -0.33
GNE-202ENST00000396594 COL4A6Q14031 1691 aa13.01□□□□□ -0.33
GNE-202ENST00000396594 TRAV14DV4A0A0A6YYC5 116 aa13.01□□□□□ -0.33
GNE-202ENST00000396594 F12P00748 615 aaPredicted RBP13.01□□□□□ -0.33
GNE-202ENST00000396594 TRGC2P03986 189 aa13.01□□□□□ -0.33
GNE-202ENST00000396594 Q8TCH9 128 aa13.01□□□□□ -0.33
GNE-202ENST00000396594 LEAP2Q969E1 77 aa13.01□□□□□ -0.33
GNE-202ENST00000396594 NMUP48645 174 aa13.01□□□□□ -0.33
GNE-202ENST00000396594 DOCK4Q8N1I0 1966 aa13□□□□□ -0.33
GNE-202ENST00000396594 LINC00587B1AMM8 73 aa13□□□□□ -0.33
GNE-202ENST00000396594 H0YL77 283 aa13□□□□□ -0.33
GNE-202ENST00000396594 LILRA1O75019 489 aa13□□□□□ -0.33
GNE-202ENST00000396594 GPR183P32249 361 aa13□□□□□ -0.33
GNE-202ENST00000396594 IGF2-ASQ6U949 168 aa13□□□□□ -0.33
GNE-202ENST00000396594 SLC25A48Q6ZT89 311 aaKnown RBP13□□□□□ -0.33
GNE-202ENST00000396594 DUX3Q96PT4 197 aa13□□□□□ -0.33
GNE-202ENST00000396594 CACNA1CQ13936 2221 aa13□□□□□ -0.33
GNE-202ENST00000396594 ORMDL2Q53FV1 153 aa13□□□□□ -0.33
GNE-202ENST00000396594 LOC389332A0A1B0GUA5 103 aa13□□□□□ -0.33
GNE-202ENST00000396594 MSGN1A6NI15 193 aa13□□□□□ -0.33
GNE-202ENST00000396594 NAPSAO96009 420 aa13□□□□□ -0.33
GNE-202ENST00000396594 C9orf139Q6ZV77 190 aa13□□□□□ -0.33
GNE-202ENST00000396594 AKIRIN1Q9H9L7 192 aaPredicted RBP13□□□□□ -0.33
GNE-202ENST00000396594 PLAUP00749 431 aa13□□□□□ -0.33
GNE-202ENST00000396594 REG1AP05451 166 aa13□□□□□ -0.33
GNE-202ENST00000396594 ZNF414Q96IQ9 312 aa13□□□□□ -0.33
GNE-202ENST00000396594 SMPXQ9UHP9 88 aa13□□□□□ -0.33
GNE-202ENST00000396594 A8MXK9 166 aa12.99□□□□□ -0.33
GNE-202ENST00000396594 J3QLI3 93 aa12.99□□□□□ -0.33
GNE-202ENST00000396594 PRSS8Q16651 343 aa12.99□□□□□ -0.33
GNE-202ENST00000396594 TRAV41A0A0B4J266 112 aa12.99□□□□□ -0.33
GNE-202ENST00000396594 ERVH48-1M5A8F1 160 aa12.99□□□□□ -0.33
GNE-202ENST00000396594 SHISA3A0PJX4 238 aa12.99□□□□□ -0.33
GNE-202ENST00000396594 IGHV1-8P0DP01 117 aa12.99□□□□□ -0.33
GNE-202ENST00000396594 B3GALT5-AS1P59052 145 aa12.99□□□□□ -0.33
GNE-202ENST00000396594 NEU1Q99519 415 aa12.99□□□□□ -0.33
GNE-202ENST00000396594 C1QTNF4Q9BXJ3 329 aa12.99□□□□□ -0.33
GNE-202ENST00000396594 PRO1933Q9H354 126 aa12.99□□□□□ -0.33
GNE-202ENST00000396594 CHD5Q8TDI0 1954 aa12.99□□□□□ -0.33
GNE-202ENST00000396594 URB1O60287 2271 aaKnown RBP12.99□□□□□ -0.33
GNE-202ENST00000396594 IGHV2-26A0A0B4J1V2 119 aa12.99□□□□□ -0.33
GNE-202ENST00000396594 CELA3BP08861 270 aa12.99□□□□□ -0.33
GNE-202ENST00000396594 REC114Q7Z4M0 266 aa12.99□□□□□ -0.33
GNE-202ENST00000396594 RLFQ13129 1914 aa12.99□□□□□ -0.33
GNE-202ENST00000396594 NUP214P35658 2090 aaPredicted RBP12.99□□□□□ -0.33
GNE-202ENST00000396594 EPDR1Q9UM22 224 aa12.98□□□□□ -0.33
GNE-202ENST00000396594 TRAV34A0A0B4J273 112 aa12.98□□□□□ -0.33
GNE-202ENST00000396594 STHQ8IWL8 128 aa12.98□□□□□ -0.33
GNE-202ENST00000396594 DMRT1Q9Y5R6 373 aa12.98□□□□□ -0.33
GNE-202ENST00000396594 PINLYPA6NC86 204 aa12.98□□□□□ -0.33
GNE-202ENST00000396594 C9JCJ5 164 aa12.98□□□□□ -0.33
GNE-202ENST00000396594 FGF16O43320 207 aa12.98□□□□□ -0.33
GNE-202ENST00000396594 GATA4P43694 442 aa12.98□□□□□ -0.33
GNE-202ENST00000396594 SRSF4Q08170 494 aaKnown RBP12.98□□□□□ -0.33
GNE-202ENST00000396594 CLEC19AQ6UXS0 136 aa12.98□□□□□ -0.33
GNE-202ENST00000396594 TMEM136Q6ZRR5 245 aa12.98□□□□□ -0.33
GNE-202ENST00000396594 VKORC1L1Q8N0U8 176 aa12.98□□□□□ -0.33
GNE-202ENST00000396594 SLC25A2Q9BXI2 301 aa12.98□□□□□ -0.33
GNE-202ENST00000396594 RNF222A6NCQ9 220 aa12.98□□□□□ -0.33
GNE-202ENST00000396594 PAX8Q06710 450 aa12.98□□□□□ -0.33
GNE-202ENST00000396594 HIST1H4GQ99525 98 aa12.98□□□□□ -0.33
GNE-202ENST00000396594 K7ENP7 123 aa12.97□□□□□ -0.33
GNE-202ENST00000396594 CRXO43186 299 aaPredicted RBP12.97□□□□□ -0.33
GNE-202ENST00000396594 C1QL1O75973 258 aa12.97□□□□□ -0.33
GNE-202ENST00000396594 LDLRAD2Q5SZI1 272 aa12.97□□□□□ -0.33
GNE-202ENST00000396594 GTSCR1Q86UQ5 136 aa12.97□□□□□ -0.33
GNE-202ENST00000396594 CHCHD1Q96BP2 118 aaKnown RBP12.97□□□□□ -0.33
GNE-202ENST00000396594 RTN4RQ9BZR6 473 aa12.97□□□□□ -0.33
GNE-202ENST00000396594 TANC1Q9C0D5 1861 aa12.97□□□□□ -0.33
GNE-202ENST00000396594 KLK2P20151 261 aa12.97□□□□□ -0.33
GNE-202ENST00000396594 MEIG1Q5JSS6 88 aa12.97□□□□□ -0.33
GNE-202ENST00000396594 IGKV3-15P01624 115 aa12.97□□□□□ -0.33
GNE-202ENST00000396594 RHOGP84095 191 aa12.97□□□□□ -0.33
GNE-202ENST00000396594 BEND2Q8NDZ0 799 aa12.97□□□□□ -0.33
GNE-202ENST00000396594 RNF166Q96A37 237 aaPredicted RBP12.97□□□□□ -0.33
GNE-202ENST00000396594 MBNL3Q9NUK0 354 aaKnown RBP12.97□□□□□ -0.33
GNE-202ENST00000396594 ZNF98A6NK75 572 aa12.97□□□□□ -0.33
GNE-202ENST00000396594 DNLZQ5SXM8 178 aa12.97□□□□□ -0.33
GNE-202ENST00000396594 LINC01356Q8N9X3 169 aa12.97□□□□□ -0.33
GNE-202ENST00000396594 CBY3A6NI87 242 aa12.96□□□□□ -0.33
GNE-202ENST00000396594 CGAP01215 116 aa12.96□□□□□ -0.33
GNE-202ENST00000396594 STAG3L3P0CL85 134 aa12.96□□□□□ -0.33
GNE-202ENST00000396594 CD300CQ08708 224 aa12.96□□□□□ -0.33
GNE-202ENST00000396594 OR10J3Q5JRS4 329 aa12.96□□□□□ -0.33
GNE-202ENST00000396594 PAM16Q9Y3D7 125 aa12.96□□□□□ -0.33
GNE-202ENST00000396594 ZNF837Q96EG3 531 aaPredicted RBP12.96□□□□□ -0.33
GNE-202ENST00000396594 PNRC2Q9NPJ4 139 aaKnown RBP12.96□□□□□ -0.33
GNE-202ENST00000396594 UNC13CQ8NB66 2214 aa12.96□□□□□ -0.33
GNE-202ENST00000396594 A0A1B0GWJ7 208 aa12.96□□□□□ -0.34
GNE-202ENST00000396594 HOXA5P20719 270 aa12.96□□□□□ -0.34
GNE-202ENST00000396594 PAQR4Q8N4S7 273 aaPredicted RBP12.96□□□□□ -0.34
GNE-202ENST00000396594 RNF114Q9Y508 228 aa12.96□□□□□ -0.34
GNE-202ENST00000396594 FNDC1Q4ZHG4 1894 aaPredicted RBP12.96□□□□□ -0.34
GNE-202ENST00000396594 NR2C2APQ86WQ0 139 aa12.96□□□□□ -0.34
GNE-202ENST00000396594 A1L4Q6 167 aa12.95□□□□□ -0.34
GNE-202ENST00000396594 RBMY1BA6NDE4 496 aaKnown RBP12.95□□□□□ -0.34
GNE-202ENST00000396594 RBMY1EA6NEQ0 496 aaKnown RBP12.95□□□□□ -0.34
GNE-202ENST00000396594 RBMY1DP0C7P1 496 aaKnown RBP12.95□□□□□ -0.34
GNE-202ENST00000396594 RBMY1A1P0DJD3 496 aaKnown RBP12.95□□□□□ -0.34
GNE-202ENST00000396594 RBMY1CP0DJD4 496 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms