RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 FAM122AQ96E09 287 aa9.8□□□□□ -0.84
ITGB1-202ENST00000396033 TMEM68Q96MH6 324 aa9.8□□□□□ -0.84
ITGB1-202ENST00000396033 NIPSNAP3BQ9BS92 247 aa9.8□□□□□ -0.84
ITGB1-202ENST00000396033 SIRT7Q9NRC8 400 aa9.8□□□□□ -0.84
ITGB1-202ENST00000396033 LOC105371242A0A075B767 164 aa9.79□□□□□ -0.84
ITGB1-202ENST00000396033 A0A1W2PPV4 95 aa9.79□□□□□ -0.84
ITGB1-202ENST00000396033 SEC14L6B5MCN3 397 aa9.79□□□□□ -0.84
ITGB1-202ENST00000396033 E7EUB6 86 aa9.79□□□□□ -0.84
ITGB1-202ENST00000396033 NDUFS7O75251 213 aa9.79□□□□□ -0.84
ITGB1-202ENST00000396033 ATP5IP56385 69 aaPredicted RBP9.79□□□□□ -0.84
ITGB1-202ENST00000396033 RAB31Q13636 194 aa9.79□□□□□ -0.84
ITGB1-202ENST00000396033 BSXQ3C1V8 233 aa9.79□□□□□ -0.84
ITGB1-202ENST00000396033 P2RX4Q99571 388 aa9.79□□□□□ -0.84
ITGB1-202ENST00000396033 PSMB3P49720 205 aa9.79□□□□□ -0.84
ITGB1-202ENST00000396033 PMS2P11Q13670 270 aa9.79□□□□□ -0.84
ITGB1-202ENST00000396033 FNDC10F2Z333 226 aa9.79□□□□□ -0.84
ITGB1-202ENST00000396033 MANBALQ9NQG1 85 aa9.79□□□□□ -0.84
ITGB1-202ENST00000396033 TRGC2P03986 189 aa9.78□□□□□ -0.84
ITGB1-202ENST00000396033 IGFBP2P18065 325 aa9.78□□□□□ -0.84
ITGB1-202ENST00000396033 FAM90A2PQ658T7 463 aa9.78□□□□□ -0.84
ITGB1-202ENST00000396033 STPG3Q8N7X2 389 aa9.78□□□□□ -0.84
ITGB1-202ENST00000396033 C2orf88Q9BSF0 95 aa9.78□□□□□ -0.84
ITGB1-202ENST00000396033 GAR1Q9NY12 217 aaKnown RBP9.78□□□□□ -0.84
ITGB1-202ENST00000396033 MEF2BQ02080 365 aaPredicted RBP9.78□□□□□ -0.84
ITGB1-202ENST00000396033 ZNF664Q8N3J9 261 aa9.78□□□□□ -0.84
ITGB1-202ENST00000396033 GATAD1Q8WUU5 269 aa9.78□□□□□ -0.84
ITGB1-202ENST00000396033 A6NNC1 897 aa9.78□□□□□ -0.84
ITGB1-202ENST00000396033 CNTFRP26992 372 aa9.78□□□□□ -0.84
ITGB1-202ENST00000396033 RPS10P46783 165 aaKnown RBP9.78□□□□□ -0.84
ITGB1-202ENST00000396033 SLC35E3Q7Z769 313 aa9.78□□□□□ -0.84
ITGB1-202ENST00000396033 FRZBQ92765 325 aa9.78□□□□□ -0.84
ITGB1-202ENST00000396033 TVP23CQ96ET8 276 aa9.78□□□□□ -0.84
ITGB1-202ENST00000396033 URGCP-MRPS24S4R325 110 aa9.78□□□□□ -0.84
ITGB1-202ENST00000396033 ACACBO00763 2458 aa9.78□□□□□ -0.84
ITGB1-202ENST00000396033 CGB1A6NKQ9 187 aa9.77□□□□□ -0.84
ITGB1-202ENST00000396033 A8MWP6 167 aa9.77□□□□□ -0.84
ITGB1-202ENST00000396033 INS-IGF2F8WCM5 200 aa9.77□□□□□ -0.84
ITGB1-202ENST00000396033 WT1-ASQ06250 92 aa9.77□□□□□ -0.84
ITGB1-202ENST00000396033 SSX2Q16385 188 aa9.77□□□□□ -0.84
ITGB1-202ENST00000396033 TEX45Q8NA69 505 aa9.77□□□□□ -0.84
ITGB1-202ENST00000396033 M0R1W7 72 aa9.77□□□□□ -0.85
ITGB1-202ENST00000396033 OR2C1O95371 312 aa9.77□□□□□ -0.85
ITGB1-202ENST00000396033 TAGLN2P37802 199 aaKnown RBP9.77□□□□□ -0.85
ITGB1-202ENST00000396033 CD81P60033 236 aa9.77□□□□□ -0.85
ITGB1-202ENST00000396033 RPL29P47914 159 aaKnown RBP9.77□□□□□ -0.85
ITGB1-202ENST00000396033 EFNA4P52798 201 aa9.77□□□□□ -0.85
ITGB1-202ENST00000396033 CD69Q07108 199 aa9.77□□□□□ -0.85
ITGB1-202ENST00000396033 KLRD1Q13241 179 aa9.77□□□□□ -0.85
ITGB1-202ENST00000396033 TMEM144Q7Z5S9 345 aa9.77□□□□□ -0.85
ITGB1-202ENST00000396033 ACTL6BO94805 426 aa9.76□□□□□ -0.85
ITGB1-202ENST00000396033 TNXAQ16473 311 aa9.76□□□□□ -0.85
ITGB1-202ENST00000396033 C21orf62-AS1Q17RA5 79 aa9.76□□□□□ -0.85
ITGB1-202ENST00000396033 MMD2Q8IY49 270 aa9.76□□□□□ -0.85
ITGB1-202ENST00000396033 HIST1H2BLQ99880 126 aa9.76□□□□□ -0.85
ITGB1-202ENST00000396033 SSX3Q99909 188 aa9.76□□□□□ -0.85
ITGB1-202ENST00000396033 CFAP46Q8IYW2 2715 aa9.76□□□□□ -0.85
ITGB1-202ENST00000396033 A0A1W2PPI3 338 aa9.76□□□□□ -0.85
ITGB1-202ENST00000396033 LY6LH3BQJ8 138 aa9.76□□□□□ -0.85
ITGB1-202ENST00000396033 PAGE4O60829 102 aa9.76□□□□□ -0.85
ITGB1-202ENST00000396033 GZMBP10144 247 aa9.76□□□□□ -0.85
ITGB1-202ENST00000396033 FABP4P15090 132 aa9.76□□□□□ -0.85
ITGB1-202ENST00000396033 HTR1DP28221 377 aa9.76□□□□□ -0.85
ITGB1-202ENST00000396033 PSG5Q15238 335 aa9.76□□□□□ -0.85
ITGB1-202ENST00000396033 PRSS8Q16651 343 aa9.76□□□□□ -0.85
ITGB1-202ENST00000396033 MRGPRG-AS1Q2M3A8 158 aa9.76□□□□□ -0.85
ITGB1-202ENST00000396033 TPTE2P1Q5T6R2 138 aa9.76□□□□□ -0.85
ITGB1-202ENST00000396033 ARHGAP32A7KAX9 2087 aa9.76□□□□□ -0.85
ITGB1-202ENST00000396033 TRGC1P0CF51 173 aa9.76□□□□□ -0.85
ITGB1-202ENST00000396033 SUB1P53999 127 aaKnown RBP eCLIP9.76□□□□□ -0.85
ITGB1-202ENST00000396033 MLANAQ16655 118 aa9.76□□□□□ -0.85
ITGB1-202ENST00000396033 OR11H6Q8NGC7 330 aa9.76□□□□□ -0.85
ITGB1-202ENST00000396033 OR4F5Q8NH21 305 aa9.76□□□□□ -0.85
ITGB1-202ENST00000396033 SLC35E1Q96K37 410 aa9.76□□□□□ -0.85
ITGB1-202ENST00000396033 OR4F4Q96R69 305 aa9.76□□□□□ -0.85
ITGB1-202ENST00000396033 IGSF10Q6WRI0 2623 aa9.75□□□□□ -0.85
ITGB1-202ENST00000396033 REG1AP05451 166 aa9.75□□□□□ -0.85
ITGB1-202ENST00000396033 GNB1P62873 340 aa9.75□□□□□ -0.85
ITGB1-202ENST00000396033 SIGLEC9Q9Y336 463 aa9.75□□□□□ -0.85
ITGB1-202ENST00000396033 TIMM23O14925 209 aa9.75□□□□□ -0.85
ITGB1-202ENST00000396033 ARL14EPLP0DKL9 152 aa9.75□□□□□ -0.85
ITGB1-202ENST00000396033 RPL27AP46776 148 aaKnown RBP9.75□□□□□ -0.85
ITGB1-202ENST00000396033 PRR20EP86478 221 aa9.75□□□□□ -0.85
ITGB1-202ENST00000396033 PRR20CP86479 221 aa9.75□□□□□ -0.85
ITGB1-202ENST00000396033 PRR20DP86480 221 aa9.75□□□□□ -0.85
ITGB1-202ENST00000396033 PRR20BP86481 221 aa9.75□□□□□ -0.85
ITGB1-202ENST00000396033 PRR20AP86496 221 aa9.75□□□□□ -0.85
ITGB1-202ENST00000396033 LDLRAD2Q5SZI1 272 aa9.75□□□□□ -0.85
ITGB1-202ENST00000396033 DPM3Q9P2X0 92 aa9.75□□□□□ -0.85
ITGB1-202ENST00000396033 IGKV1OR2-108A0A075B7D4 117 aa9.75□□□□□ -0.85
ITGB1-202ENST00000396033 CRYGBP07316 175 aa9.75□□□□□ -0.85
ITGB1-202ENST00000396033 PRTN3P24158 256 aa9.75□□□□□ -0.85
ITGB1-202ENST00000396033 OR10J1P30954 320 aa9.75□□□□□ -0.85
ITGB1-202ENST00000396033 NUTF2P61970 127 aaKnown RBP9.75□□□□□ -0.85
ITGB1-202ENST00000396033 RHOBP62745 196 aa9.75□□□□□ -0.85
ITGB1-202ENST00000396033 ZNF674Q2M3X9 581 aa9.75□□□□□ -0.85
ITGB1-202ENST00000396033 MRPL41Q8IXM3 137 aaKnown RBP9.75□□□□□ -0.85
ITGB1-202ENST00000396033 ACY3Q96HD9 319 aa9.75□□□□□ -0.85
ITGB1-202ENST00000396033 SLC45A2Q9UMX9 530 aa9.75□□□□□ -0.85
ITGB1-202ENST00000396033 HILPDAQ9Y5L2 63 aa9.75□□□□□ -0.85
ITGB1-202ENST00000396033 TACC2O95359 2948 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms