RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 LAMA5O15230 3695 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 H3BQ15 152 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 ORM2P19652 201 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 FAM106AQ4KMX7 169 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 SGMS2Q8NHU3 365 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 UBALD1Q8TB05 177 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 PLPPR1Q8TBJ4 325 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 TOX4O94842 621 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 HABP2Q14520 560 aaPredicted RBP2.8□□□□□ -1.96
VPS13C-203ENST00000395896 SLC16A13Q7RTY0 426 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 MBD3L1Q8WWY6 194 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 DYRK2Q92630 601 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 NABP2Q9BQ15 211 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 PAXXQ9BUH6 204 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 MFSD2BA6NFX1 497 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 KIAA1324LA8MWY0 1029 aaPredicted RBP2.8□□□□□ -1.96
VPS13C-203ENST00000395896 UPK2O00526 184 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 HIGD1AQ9Y241 93 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 URGCP-MRPS24S4R325 110 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 IGHV2-26A0A0B4J1V2 119 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 MPTX1A8MV57 137 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 J3QLI3 93 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 CHEK1O14757 476 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 SMIM17P0DL12 118 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 MGST1P10620 155 aaKnown RBP2.8□□□□□ -1.96
VPS13C-203ENST00000395896 ZNF273Q14593 569 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 BAGE3Q86Y29 109 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 BAGE2Q86Y30 109 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 USMG5Q96IX5 58 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 DMDP11532 3685 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 A0A1B0GWJ7 208 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 INS-IGF2F8WCM5 200 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 S100A4P26447 101 aaKnown RBP2.79□□□□□ -1.96
VPS13C-203ENST00000395896 UBE2E1P51965 193 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 ZNF137PP52743 207 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 IGKV1D-13A0A0B4J2D9 117 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 FAM157CP0CG43 387 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 IGKV1-13P0DP09 117 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 PAX6P26367 422 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 AWAT1Q58HT5 328 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 NECAP1Q8NC96 275 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 OR1B1Q8NGR6 318 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 DPF1Q92782 380 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 COQ2Q96H96 371 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 TMEM88Q6PEY1 159 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 P01737 135 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 OR10J4P0C629 311 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 GCSHP23434 173 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 ID1P41134 155 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 SMAGPQ0VAQ4 97 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 RNF166Q96A37 237 aaPredicted RBP2.79□□□□□ -1.96
VPS13C-203ENST00000395896 EEF1AKMT3Q96AZ1 226 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 AUP1Q9Y679 476 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 ZNF705GA8MUZ8 300 aaPredicted RBP2.79□□□□□ -1.96
VPS13C-203ENST00000395896 RAMP3O60896 148 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 DAZAP2Q15038 168 aaPredicted RBP2.79□□□□□ -1.96
VPS13C-203ENST00000395896 LINC01559Q495D7 138 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 IFI27L2Q9H2X8 130 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 DCHS1Q96JQ0 3298 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 SMIM6P0DI80 62 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 NPPCP23582 126 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 NUTF2P61970 127 aaKnown RBP2.79□□□□□ -1.96
VPS13C-203ENST00000395896 GUCA2BQ16661 112 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 SPNS3Q6ZMD2 512 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 CYB561D1Q8N8Q1 229 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 SSMEM1Q8WWF3 244 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 PARP12Q9H0J9 701 aaKnown RBP2.79□□□□□ -1.96
VPS13C-203ENST00000395896 ASPMQ8IZT6 3477 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 BUB1B-PAK6H3BSN5 160 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 NBEAP1P0C6P0 100 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 KIAA0141Q14154 515 aaPredicted RBP2.79□□□□□ -1.96
VPS13C-203ENST00000395896 IZUMO4Q1ZYL8 232 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 PNKDQ8N490 385 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 SLC50A1Q9BRV3 221 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 LY96Q9Y6Y9 160 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 IGHV3OR15-7A0A075B7D8 119 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 H0YL77 283 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 GAMTQ14353 236 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 TMEM116Q8NCL8 245 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 LINC01560Q8TB33 94 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 FUT9Q9Y231 359 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 IGKV1D-8A0A087WSZ0 117 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 A0A1W2PNU3 283 aaPredicted RBP2.79□□□□□ -1.96
VPS13C-203ENST00000395896 TCRBV4S1A1TA0A5B7 111 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 SAA1P0DJI8 122 aaPredicted RBP2.79□□□□□ -1.96
VPS13C-203ENST00000395896 SUMO1P63165 101 aaKnown RBP2.79□□□□□ -1.96
VPS13C-203ENST00000395896 TMEM78Q5T7P6 136 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 C21orf62Q9NYP8 219 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 ZFP30Q9Y2G7 519 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 ZNF785A8K8V0 405 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 SLC25A5P05141 298 aaKnown RBP2.79□□□□□ -1.96
VPS13C-203ENST00000395896 SPINK2P20155 84 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 USF2Q15853 346 aaPredicted RBP2.79□□□□□ -1.96
VPS13C-203ENST00000395896 TMEM200BQ69YZ2 307 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 DTX2Q86UW9 622 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 ARL6IP6Q8N6S5 226 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 ARPC1AQ92747 370 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 HILPDAQ9Y5L2 63 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 TRAV14DV4A0A0A6YYC5 116 aa2.79□□□□□ -1.96
VPS13C-203ENST00000395896 NXPH3O95157 252 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms