RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 PGLYRP4Q96LB8 373 aa6.4□□□□□ -1.39
VTI1A-201ENST00000393077 LSM4Q9Y4Z0 139 aaKnown RBP6.4□□□□□ -1.39
VTI1A-201ENST00000393077 HIGD1CA8MV81 97 aa6.39□□□□□ -1.39
VTI1A-201ENST00000393077 IGKV1D-33P01593 117 aa6.39□□□□□ -1.39
VTI1A-201ENST00000393077 IGKV1-33P01594 117 aa6.39□□□□□ -1.39
VTI1A-201ENST00000393077 PRTN3P24158 256 aa6.39□□□□□ -1.39
VTI1A-201ENST00000393077 OPRK1P41145 380 aa6.39□□□□□ -1.39
VTI1A-201ENST00000393077 PTGDSP41222 190 aa6.39□□□□□ -1.39
VTI1A-201ENST00000393077 FHL1Q13642 323 aa6.39□□□□□ -1.39
VTI1A-201ENST00000393077 COLCA1Q6ZS62 124 aa6.39□□□□□ -1.39
VTI1A-201ENST00000393077 C20orf78Q9BR46 151 aa6.39□□□□□ -1.39
VTI1A-201ENST00000393077 FAM234AQ9H0X4 552 aa6.39□□□□□ -1.39
VTI1A-201ENST00000393077 PGPEP1Q9NXJ5 209 aa6.39□□□□□ -1.39
VTI1A-201ENST00000393077 TRAV8-1A0A0A6YYK1 113 aa6.39□□□□□ -1.39
VTI1A-201ENST00000393077 A0A1W2PRD5 423 aa6.39□□□□□ -1.39
VTI1A-201ENST00000393077 A0A1W2PRF3 423 aa6.39□□□□□ -1.39
VTI1A-201ENST00000393077 A0A1W2PRM7 423 aa6.39□□□□□ -1.39
VTI1A-201ENST00000393077 A8MWV9 139 aa6.39□□□□□ -1.39
VTI1A-201ENST00000393077 TNFSF11O14788 317 aa6.39□□□□□ -1.39
VTI1A-201ENST00000393077 FCN3O75636 299 aa6.39□□□□□ -1.39
VTI1A-201ENST00000393077 ERVK11-1P61568 191 aa6.39□□□□□ -1.39
VTI1A-201ENST00000393077 VWC2Q2TAL6 325 aa6.39□□□□□ -1.39
VTI1A-201ENST00000393077 FGFRL1Q8N441 504 aa6.39□□□□□ -1.39
VTI1A-201ENST00000393077 RNF166Q96A37 237 aaPredicted RBP6.39□□□□□ -1.39
VTI1A-201ENST00000393077 TMEM8BA6NDV4 472 aa6.39□□□□□ -1.39
VTI1A-201ENST00000393077 FAM90A27PA6NNH2 459 aa6.39□□□□□ -1.39
VTI1A-201ENST00000393077 C9JCJ5 164 aa6.39□□□□□ -1.39
VTI1A-201ENST00000393077 ZG16O60844 167 aa6.39□□□□□ -1.39
VTI1A-201ENST00000393077 EVI2AP22794 236 aa6.39□□□□□ -1.39
VTI1A-201ENST00000393077 CACNG7P62955 275 aa6.39□□□□□ -1.39
VTI1A-201ENST00000393077 WIPI1Q5MNZ9 446 aaPredicted RBP6.39□□□□□ -1.39
VTI1A-201ENST00000393077 ASCL4Q6XD76 172 aa6.39□□□□□ -1.39
VTI1A-201ENST00000393077 SCRT2Q9NQ03 307 aa6.39□□□□□ -1.39
VTI1A-201ENST00000393077 NOTCH4Q99466 2003 aa6.39□□□□□ -1.39
VTI1A-201ENST00000393077 CGAP01215 116 aa6.38□□□□□ -1.39
VTI1A-201ENST00000393077 MT-ATP8P03928 68 aa6.38□□□□□ -1.39
VTI1A-201ENST00000393077 SP9P0CG40 484 aa6.38□□□□□ -1.39
VTI1A-201ENST00000393077 KLRD1Q13241 179 aa6.38□□□□□ -1.39
VTI1A-201ENST00000393077 HES3Q5TGS1 186 aa6.38□□□□□ -1.39
VTI1A-201ENST00000393077 SLC35E4Q6ICL7 350 aa6.38□□□□□ -1.39
VTI1A-201ENST00000393077 GUSBP11Q6P575 273 aa6.38□□□□□ -1.39
VTI1A-201ENST00000393077 UBALD2Q8IYN6 164 aa6.38□□□□□ -1.39
VTI1A-201ENST00000393077 ZNF611Q8N823 705 aa6.38□□□□□ -1.39
VTI1A-201ENST00000393077 VSTM2LQ96N03 204 aa6.38□□□□□ -1.39
VTI1A-201ENST00000393077 SPATA25Q9BR10 227 aa6.38□□□□□ -1.39
VTI1A-201ENST00000393077 RAB9BQ9NP90 201 aa6.38□□□□□ -1.39
VTI1A-201ENST00000393077 WDR87Q6ZQQ6 2873 aa6.38□□□□□ -1.39
VTI1A-201ENST00000393077 LILRA5A6NI73 299 aa6.38□□□□□ -1.39
VTI1A-201ENST00000393077 SLC25A5P05141 298 aaKnown RBP6.38□□□□□ -1.39
VTI1A-201ENST00000393077 COL8A1P27658 744 aa6.38□□□□□ -1.39
VTI1A-201ENST00000393077 REG1BP48304 166 aa6.38□□□□□ -1.39
VTI1A-201ENST00000393077 PAX9P55771 341 aa6.38□□□□□ -1.39
VTI1A-201ENST00000393077 NXPH1P58417 271 aa6.38□□□□□ -1.39
VTI1A-201ENST00000393077 EGR4Q05215 589 aa6.38□□□□□ -1.39
VTI1A-201ENST00000393077 SPACA3Q8IXA5 215 aa6.38□□□□□ -1.39
VTI1A-201ENST00000393077 PPDPFLQ8WWR9 84 aa6.38□□□□□ -1.39
VTI1A-201ENST00000393077 H1FXQ92522 213 aaKnown RBP6.38□□□□□ -1.39
VTI1A-201ENST00000393077 IGHV1OR21-1A0A087WYE8 117 aa6.38□□□□□ -1.39
VTI1A-201ENST00000393077 PLGLB1Q02325 96 aa6.38□□□□□ -1.39
VTI1A-201ENST00000393077 RIGQ13278 110 aa6.38□□□□□ -1.39
VTI1A-201ENST00000393077 NEU4Q8WWR8 484 aaPredicted RBP6.38□□□□□ -1.39
VTI1A-201ENST00000393077 ZNF775Q96BV0 537 aaPredicted RBP6.38□□□□□ -1.39
VTI1A-201ENST00000393077 JMJD8Q96S16 334 aa6.38□□□□□ -1.39
VTI1A-201ENST00000393077 DEPPQ9NTK1 212 aa6.38□□□□□ -1.39
VTI1A-201ENST00000393077 KLF12Q9Y4X4 402 aa6.38□□□□□ -1.39
VTI1A-201ENST00000393077 MKI67P46013 3256 aaKnown RBP6.38□□□□□ -1.39
VTI1A-201ENST00000393077 TICRRQ7Z2Z1 1910 aa6.38□□□□□ -1.39
VTI1A-201ENST00000393077 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.37□□□□□ -1.39
VTI1A-201ENST00000393077 NCBP2LA6PVI3 153 aaKnown RBP6.37□□□□□ -1.39
VTI1A-201ENST00000393077 FOXH1O75593 365 aa6.37□□□□□ -1.39
VTI1A-201ENST00000393077 UFSP1Q6NVU6 142 aa6.37□□□□□ -1.39
VTI1A-201ENST00000393077 RASL11AQ6T310 242 aa6.37□□□□□ -1.39
VTI1A-201ENST00000393077 TEPPQ6URK8 271 aa6.37□□□□□ -1.39
VTI1A-201ENST00000393077 FADS6Q8N9I5 356 aa6.37□□□□□ -1.39
VTI1A-201ENST00000393077 TMEM52Q8NDY8 209 aa6.37□□□□□ -1.39
VTI1A-201ENST00000393077 ZNF502Q8TBZ5 544 aa6.37□□□□□ -1.39
VTI1A-201ENST00000393077 DLX4Q92988 240 aaPredicted RBP6.37□□□□□ -1.39
VTI1A-201ENST00000393077 PLXND1Q9Y4D7 1925 aa6.37□□□□□ -1.39
VTI1A-201ENST00000393077 PRR33A8MZF0 331 aa6.37□□□□□ -1.39
VTI1A-201ENST00000393077 K7ERJ3 54 aa6.37□□□□□ -1.39
VTI1A-201ENST00000393077 ZFAND5O76080 213 aa6.37□□□□□ -1.39
VTI1A-201ENST00000393077 TGFAP01135 160 aa6.37□□□□□ -1.39
VTI1A-201ENST00000393077 FRMD6-AS1P0C7T7 363 aa6.37□□□□□ -1.39
VTI1A-201ENST00000393077 RNPS1Q15287 305 aaKnown RBP6.37□□□□□ -1.39
VTI1A-201ENST00000393077 ZNF585BQ52M93 769 aa6.37□□□□□ -1.39
VTI1A-201ENST00000393077 Q8N976 141 aa6.37□□□□□ -1.39
VTI1A-201ENST00000393077 LHFPL6Q9Y693 200 aa6.37□□□□□ -1.39
VTI1A-201ENST00000393077 LY96Q9Y6Y9 160 aa6.37□□□□□ -1.39
VTI1A-201ENST00000393077 IGKV1-9A0A0C4DH69 117 aa6.37□□□□□ -1.39
VTI1A-201ENST00000393077 HRKO00198 91 aa6.37□□□□□ -1.39
VTI1A-201ENST00000393077 NPPCP23582 126 aa6.37□□□□□ -1.39
VTI1A-201ENST00000393077 FOLR3P41439 243 aa6.37□□□□□ -1.39
VTI1A-201ENST00000393077 ZNF138P52744 262 aa6.37□□□□□ -1.39
VTI1A-201ENST00000393077 C16orf47Q6ZP98 133 aaPredicted RBP6.37□□□□□ -1.39
VTI1A-201ENST00000393077 BDP1A6H8Y1 2624 aa6.37□□□□□ -1.39
VTI1A-201ENST00000393077 NBASA2RRP1 2371 aa6.37□□□□□ -1.39
VTI1A-201ENST00000393077 PLXNA3P51805 1871 aa6.36□□□□□ -1.39
VTI1A-201ENST00000393077 C17orf51A8MQB3 221 aa6.36□□□□□ -1.39
VTI1A-201ENST00000393077 GLRXP35754 106 aa6.36□□□□□ -1.39
VTI1A-201ENST00000393077 LINC00310P59036 64 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms