RNA–Protein interactions for RNA: ENST00000392556.8

TRAF3IP2-208, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-208ENST00000392556 CADP27708 2225 aa9.4□□□□□ -0.9
TRAF3IP2-208ENST00000392556 A0A1W2PR80 420 aa9.4□□□□□ -0.91
TRAF3IP2-208ENST00000392556 MT-ATP6P00846 226 aa9.4□□□□□ -0.91
TRAF3IP2-208ENST00000392556 HLA-DRB1P01911 266 aa9.4□□□□□ -0.91
TRAF3IP2-208ENST00000392556 CCL1P22362 96 aa9.4□□□□□ -0.91
TRAF3IP2-208ENST00000392556 GUCA1AP43080 201 aaPredicted RBP9.4□□□□□ -0.91
TRAF3IP2-208ENST00000392556 REG1BP48304 166 aa9.4□□□□□ -0.91
TRAF3IP2-208ENST00000392556 FOXG1P55316 489 aaPredicted RBP9.4□□□□□ -0.91
TRAF3IP2-208ENST00000392556 LGALS4P56470 323 aa9.4□□□□□ -0.91
TRAF3IP2-208ENST00000392556 CKS1BP61024 79 aa9.4□□□□□ -0.91
TRAF3IP2-208ENST00000392556 ZNF90Q03938 601 aa9.4□□□□□ -0.91
TRAF3IP2-208ENST00000392556 OR10V1Q8NGI7 309 aa9.4□□□□□ -0.91
TRAF3IP2-208ENST00000392556 OR10G8Q8NGN5 311 aa9.4□□□□□ -0.91
TRAF3IP2-208ENST00000392556 NEU4Q8WWR8 484 aaPredicted RBP9.4□□□□□ -0.91
TRAF3IP2-208ENST00000392556 OXGR1Q96P68 337 aa9.4□□□□□ -0.91
TRAF3IP2-208ENST00000392556 RAB1BQ9H0U4 201 aa9.4□□□□□ -0.91
TRAF3IP2-208ENST00000392556 PLEKHJ1Q9NW61 149 aa9.4□□□□□ -0.91
TRAF3IP2-208ENST00000392556 KCNS2Q9ULS6 477 aa9.4□□□□□ -0.91
TRAF3IP2-208ENST00000392556 UBE2J1Q9Y385 318 aaPredicted RBP9.4□□□□□ -0.91
TRAF3IP2-208ENST00000392556 CR1P17927 2039 aa9.39□□□□□ -0.91
TRAF3IP2-208ENST00000392556 TRAV36DV7A0A075B6V5 113 aa9.39□□□□□ -0.91
TRAF3IP2-208ENST00000392556 MUC21A0A0G2JKD1 596 aa9.39□□□□□ -0.91
TRAF3IP2-208ENST00000392556 MUC21A0A140T8X8 626 aa9.39□□□□□ -0.91
TRAF3IP2-208ENST00000392556 IGLV1-44P01699 117 aa9.39□□□□□ -0.91
TRAF3IP2-208ENST00000392556 IGHV4-31P0DP07 118 aa9.39□□□□□ -0.91
TRAF3IP2-208ENST00000392556 PMCHP20382 165 aa9.39□□□□□ -0.91
TRAF3IP2-208ENST00000392556 SLAQ13239 276 aa9.39□□□□□ -0.91
TRAF3IP2-208ENST00000392556 MUC21Q5SSG8 566 aa9.39□□□□□ -0.91
TRAF3IP2-208ENST00000392556 C6orf201Q7Z4U5 140 aa9.39□□□□□ -0.91
TRAF3IP2-208ENST00000392556 OR51E1Q8TCB6 317 aa9.39□□□□□ -0.91
TRAF3IP2-208ENST00000392556 CENPMQ9NSP4 180 aa9.39□□□□□ -0.91
TRAF3IP2-208ENST00000392556 ABCA1O95477 2261 aa9.39□□□□□ -0.91
TRAF3IP2-208ENST00000392556 IGHV1-18A0A0C4DH31 117 aa9.39□□□□□ -0.91
TRAF3IP2-208ENST00000392556 C11orf98E9PRG8 122 aa9.39□□□□□ -0.91
TRAF3IP2-208ENST00000392556 IGKV3-15P01624 115 aa9.39□□□□□ -0.91
TRAF3IP2-208ENST00000392556 CRIP3Q6Q6R5 217 aa9.39□□□□□ -0.91
TRAF3IP2-208ENST00000392556 OR8B3Q8NGG8 313 aa9.39□□□□□ -0.91
TRAF3IP2-208ENST00000392556 OR8B2Q96RD0 313 aa9.39□□□□□ -0.91
TRAF3IP2-208ENST00000392556 HDHD3Q9BSH5 251 aaPredicted RBP9.39□□□□□ -0.91
TRAF3IP2-208ENST00000392556 NPVFQ9HCQ7 196 aa9.39□□□□□ -0.91
TRAF3IP2-208ENST00000392556 C1RLQ9NZP8 487 aa9.39□□□□□ -0.91
TRAF3IP2-208ENST00000392556 PIGBOS1A0A0B4J2F0 54 aa9.38□□□□□ -0.91
TRAF3IP2-208ENST00000392556 PAGE4O60829 102 aa9.38□□□□□ -0.91
TRAF3IP2-208ENST00000392556 IGKV1D-33P01593 117 aa9.38□□□□□ -0.91
TRAF3IP2-208ENST00000392556 IGKV1-33P01594 117 aa9.38□□□□□ -0.91
TRAF3IP2-208ENST00000392556 CLDN17P56750 224 aa9.38□□□□□ -0.91
TRAF3IP2-208ENST00000392556 HERV-K104P61576 105 aa9.38□□□□□ -0.91
TRAF3IP2-208ENST00000392556 HBG1P69891 147 aa9.38□□□□□ -0.91
TRAF3IP2-208ENST00000392556 HBG2P69892 147 aa9.38□□□□□ -0.91
TRAF3IP2-208ENST00000392556 C1QL2Q7Z5L3 287 aa9.38□□□□□ -0.91
TRAF3IP2-208ENST00000392556 LINC00346Q8IVM7 164 aa9.38□□□□□ -0.91
TRAF3IP2-208ENST00000392556 ATOH7Q8N100 152 aa9.38□□□□□ -0.91
TRAF3IP2-208ENST00000392556 TSKUQ8WUA8 353 aa9.38□□□□□ -0.91
TRAF3IP2-208ENST00000392556 TAF15Q92804 592 aaKnown RBP eCLIP9.38□□□□□ -0.91
TRAF3IP2-208ENST00000392556 POM121L2Q96KW2 1035 aa9.38□□□□□ -0.91
TRAF3IP2-208ENST00000392556 IGKV1-9A0A0C4DH69 117 aa9.37□□□□□ -0.91
TRAF3IP2-208ENST00000392556 SNURFLB1AK76 121 aa9.37□□□□□ -0.91
TRAF3IP2-208ENST00000392556 C11orf94C9JXX5 98 aa9.37□□□□□ -0.91
TRAF3IP2-208ENST00000392556 K7EP34 96 aa9.37□□□□□ -0.91
TRAF3IP2-208ENST00000392556 ZNF205O95201 554 aa9.37□□□□□ -0.91
TRAF3IP2-208ENST00000392556 CRYGCP07315 174 aa9.37□□□□□ -0.91
TRAF3IP2-208ENST00000392556 GNB1P62873 340 aa9.37□□□□□ -0.91
TRAF3IP2-208ENST00000392556 RELBQ01201 579 aa9.37□□□□□ -0.91
TRAF3IP2-208ENST00000392556 KISS1Q15726 138 aa9.37□□□□□ -0.91
TRAF3IP2-208ENST00000392556 MRPL21Q7Z2W9 205 aaKnown RBP9.37□□□□□ -0.91
TRAF3IP2-208ENST00000392556 Q96M66 194 aa9.37□□□□□ -0.91
TRAF3IP2-208ENST00000392556 COMMD5Q9GZQ3 224 aa9.37□□□□□ -0.91
TRAF3IP2-208ENST00000392556 HES4Q9HCC6 221 aa9.37□□□□□ -0.91
TRAF3IP2-208ENST00000392556 KCNIP2Q9NS61 270 aa9.37□□□□□ -0.91
TRAF3IP2-208ENST00000392556 TMEM189A5PLL7 270 aa9.37□□□□□ -0.91
TRAF3IP2-208ENST00000392556 CCNOP22674 350 aa9.37□□□□□ -0.91
TRAF3IP2-208ENST00000392556 IER3P46695 156 aa9.37□□□□□ -0.91
TRAF3IP2-208ENST00000392556 SEC11AP67812 179 aa9.37□□□□□ -0.91
TRAF3IP2-208ENST00000392556 ADIPOQQ15848 244 aa9.37□□□□□ -0.91
TRAF3IP2-208ENST00000392556 H1FNTQ75WM6 255 aaPredicted RBP9.37□□□□□ -0.91
TRAF3IP2-208ENST00000392556 DOK3Q7L591 496 aa9.37□□□□□ -0.91
TRAF3IP2-208ENST00000392556 GATAD1Q8WUU5 269 aa9.37□□□□□ -0.91
TRAF3IP2-208ENST00000392556 NANOS1Q8WY41 292 aaKnown RBP9.37□□□□□ -0.91
TRAF3IP2-208ENST00000392556 TXNDC17Q9BRA2 123 aa9.37□□□□□ -0.91
TRAF3IP2-208ENST00000392556 CHRDL1Q9BU40 450 aa9.37□□□□□ -0.91
TRAF3IP2-208ENST00000392556 LHFPL6Q9Y693 200 aa9.37□□□□□ -0.91
TRAF3IP2-208ENST00000392556 RAB29O14966 203 aa9.36□□□□□ -0.91
TRAF3IP2-208ENST00000392556 CELA3BP08861 270 aa9.36□□□□□ -0.91
TRAF3IP2-208ENST00000392556 CECR9P0C854 216 aa9.36□□□□□ -0.91
TRAF3IP2-208ENST00000392556 SRD5A1P18405 259 aa9.36□□□□□ -0.91
TRAF3IP2-208ENST00000392556 FUT6P51993 359 aa9.36□□□□□ -0.91
TRAF3IP2-208ENST00000392556 HTD2P86397 168 aa9.36□□□□□ -0.91
TRAF3IP2-208ENST00000392556 OR8B8Q15620 311 aa9.36□□□□□ -0.91
TRAF3IP2-208ENST00000392556 LCN12Q6JVE5 192 aa9.36□□□□□ -0.91
TRAF3IP2-208ENST00000392556 SLC25A34Q6PIV7 304 aa9.36□□□□□ -0.91
TRAF3IP2-208ENST00000392556 TBC1D26Q86UD7 250 aa9.36□□□□□ -0.91
TRAF3IP2-208ENST00000392556 OR5A1Q8NGJ0 315 aa9.36□□□□□ -0.91
TRAF3IP2-208ENST00000392556 RCHY1Q96PM5 261 aa9.36□□□□□ -0.91
TRAF3IP2-208ENST00000392556 ULBP2Q9BZM5 246 aa9.36□□□□□ -0.91
TRAF3IP2-208ENST00000392556 PGPEP1Q9NXJ5 209 aa9.36□□□□□ -0.91
TRAF3IP2-208ENST00000392556 PLCE1Q9P212 2302 aa9.36□□□□□ -0.91
TRAF3IP2-208ENST00000392556 HIST1H1AQ02539 215 aaPredicted RBP9.36□□□□□ -0.91
TRAF3IP2-208ENST00000392556 HSD52Q0P140 79 aa9.36□□□□□ -0.91
TRAF3IP2-208ENST00000392556 ARL16Q0P5N6 197 aa9.36□□□□□ -0.91
TRAF3IP2-208ENST00000392556 ZNF439Q8NDP4 499 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms