RNA–Protein interactions for RNA: ENST00000390445.2

TRAV17-201, Transcript of T cell receptor alpha variable 17, humanhuman

APPRIS P1 BASIC

Gene TRAV17, Length 484 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17-201ENST00000390445 SCARB1Q8WTV0 552 aa6.21□□□□□ -1.42
TRAV17-201ENST00000390445 TMEM190Q8WZ59 177 aa6.21□□□□□ -1.42
TRAV17-201ENST00000390445 DGCR14Q96DF8 476 aaKnown RBP6.21□□□□□ -1.42
TRAV17-201ENST00000390445 OVOL2Q9BRP0 275 aa6.21□□□□□ -1.42
TRAV17-201ENST00000390445 AIFM2Q9BRQ8 373 aa6.21□□□□□ -1.42
TRAV17-201ENST00000390445 CHRDL1Q9BU40 450 aa6.21□□□□□ -1.42
TRAV17-201ENST00000390445 NDUFA4L2Q9NRX3 87 aa6.21□□□□□ -1.42
TRAV17-201ENST00000390445 LOC102724200A0A096LPH7 203 aaPredicted RBP6.2□□□□□ -1.42
TRAV17-201ENST00000390445 K7EIM0 57 aa6.2□□□□□ -1.42
TRAV17-201ENST00000390445 GPR31O00270 319 aa6.2□□□□□ -1.42
TRAV17-201ENST00000390445 PRSS3P35030 304 aa6.2□□□□□ -1.42
TRAV17-201ENST00000390445 UCP3P55916 312 aa6.2□□□□□ -1.42
TRAV17-201ENST00000390445 TAS2R46P59540 309 aa6.2□□□□□ -1.42
TRAV17-201ENST00000390445 EWSR1Q01844 656 aaKnown RBP eCLIP6.2□□□□□ -1.42
TRAV17-201ENST00000390445 RNASE12Q5GAN4 147 aaKnown RBP6.2□□□□□ -1.42
TRAV17-201ENST00000390445 SNX29P2Q8IUI4 249 aa6.2□□□□□ -1.42
TRAV17-201ENST00000390445 CROCCP3Q8IVE0 287 aa6.2□□□□□ -1.42
TRAV17-201ENST00000390445 OR1L6Q8NGR2 347 aa6.2□□□□□ -1.42
TRAV17-201ENST00000390445 VN1R17PQ8TDU5 208 aa6.2□□□□□ -1.42
TRAV17-201ENST00000390445 GPX8Q8TED1 209 aa6.2□□□□□ -1.42
TRAV17-201ENST00000390445 LSM10Q969L4 123 aaKnown RBP6.2□□□□□ -1.42
TRAV17-201ENST00000390445 SRSF8Q9BRL6 282 aaKnown RBP6.2□□□□□ -1.42
TRAV17-201ENST00000390445 C20orf24Q9BUV8 137 aa6.2□□□□□ -1.42
TRAV17-201ENST00000390445 GGTLC1Q9BX51 225 aa6.2□□□□□ -1.42
TRAV17-201ENST00000390445 THYN1Q9P016 225 aa6.2□□□□□ -1.42
TRAV17-201ENST00000390445 MRPL27Q9P0M9 148 aaKnown RBP6.2□□□□□ -1.42
TRAV17-201ENST00000390445 COMMD3Q9UBI1 195 aa6.2□□□□□ -1.42
TRAV17-201ENST00000390445 UFC1Q9Y3C8 167 aa6.2□□□□□ -1.42
TRAV17-201ENST00000390445 OR51B2Q9Y5P1 312 aa6.2□□□□□ -1.42
TRAV17-201ENST00000390445 F11RQ9Y624 299 aaKnown RBP6.2□□□□□ -1.42
TRAV17-201ENST00000390445 A0A087WWL8 130 aa6.19□□□□□ -1.42
TRAV17-201ENST00000390445 IGHV3-49A0A0A0MS15 119 aa6.19□□□□□ -1.42
TRAV17-201ENST00000390445 IGKV1-39P01597 117 aa6.19□□□□□ -1.42
TRAV17-201ENST00000390445 IGHV3-48P01763 117 aa6.19□□□□□ -1.42
TRAV17-201ENST00000390445 IGKV1D-39P04432 117 aa6.19□□□□□ -1.42
TRAV17-201ENST00000390445 ELLP55199 621 aaPredicted RBP6.19□□□□□ -1.42
TRAV17-201ENST00000390445 VBP1P61758 197 aa6.19□□□□□ -1.42
TRAV17-201ENST00000390445 IZUMO4Q1ZYL8 232 aa6.19□□□□□ -1.42
TRAV17-201ENST00000390445 DEFB135Q30KP9 77 aa6.19□□□□□ -1.42
TRAV17-201ENST00000390445 ODF3L2Q3SX64 289 aa6.19□□□□□ -1.42
TRAV17-201ENST00000390445 Q56UQ5 140 aa6.19□□□□□ -1.42
TRAV17-201ENST00000390445 SPINK9Q5DT21 86 aa6.19□□□□□ -1.42
TRAV17-201ENST00000390445 TBC1D26Q86UD7 250 aa6.19□□□□□ -1.42
TRAV17-201ENST00000390445 OR2C3Q8N628 320 aa6.19□□□□□ -1.42
TRAV17-201ENST00000390445 TSPAN14Q8NG11 270 aa6.19□□□□□ -1.42
TRAV17-201ENST00000390445 OR6F1Q8NGZ6 308 aa6.19□□□□□ -1.42
TRAV17-201ENST00000390445 BORCS5Q969J3 196 aa6.19□□□□□ -1.42
TRAV17-201ENST00000390445 MARC2Q969Z3 335 aa6.19□□□□□ -1.42
TRAV17-201ENST00000390445 SLC25A46Q96AG3 418 aa6.19□□□□□ -1.42
TRAV17-201ENST00000390445 C5orf66Q9H5L9 145 aa6.19□□□□□ -1.42
TRAV17-201ENST00000390445 C21orf62Q9NYP8 219 aa6.19□□□□□ -1.42
TRAV17-201ENST00000390445 TRGV11A0A075B6L2 103 aa6.18□□□□□ -1.42
TRAV17-201ENST00000390445 IGHV3OR16-13A0A075B7E8 117 aa6.18□□□□□ -1.42
TRAV17-201ENST00000390445 A0A087WXM4 84 aa6.18□□□□□ -1.42
TRAV17-201ENST00000390445 IGHV3-74A0A0B4J1X5 117 aa6.18□□□□□ -1.42
TRAV17-201ENST00000390445 TRAV25A0A0B4J276 109 aa6.18□□□□□ -1.42
TRAV17-201ENST00000390445 A0A0J9YWU9 116 aa6.18□□□□□ -1.42
TRAV17-201ENST00000390445 C15orf61A6NNL5 157 aa6.18□□□□□ -1.42
TRAV17-201ENST00000390445 NDUFA4O00483 81 aa6.18□□□□□ -1.42
TRAV17-201ENST00000390445 TSPAN4O14817 238 aa6.18□□□□□ -1.42
TRAV17-201ENST00000390445 HPGDSO60760 199 aa6.18□□□□□ -1.42
TRAV17-201ENST00000390445 SNAPC5O75971 98 aa6.18□□□□□ -1.42
TRAV17-201ENST00000390445 JTBO76095 146 aa6.18□□□□□ -1.42
TRAV17-201ENST00000390445 CTSDP07339 412 aaPredicted RBP6.18□□□□□ -1.42
TRAV17-201ENST00000390445 FGF2P09038 288 aa6.18□□□□□ -1.42
TRAV17-201ENST00000390445 RPL35AP18077 110 aaKnown RBP6.18□□□□□ -1.42
TRAV17-201ENST00000390445 ELK1P19419 428 aa6.18□□□□□ -1.42
TRAV17-201ENST00000390445 TSPAN5P62079 268 aa6.18□□□□□ -1.42
TRAV17-201ENST00000390445 PMS2P11Q13670 270 aa6.18□□□□□ -1.42
TRAV17-201ENST00000390445 ANKRD55Q3KP44 614 aa6.18□□□□□ -1.42
TRAV17-201ENST00000390445 THOC7Q6I9Y2 204 aaKnown RBP6.18□□□□□ -1.42
TRAV17-201ENST00000390445 HSD17B13Q7Z5P4 300 aaPredicted RBP6.18□□□□□ -1.42
TRAV17-201ENST00000390445 CMTM1Q8IZ96 169 aa6.18□□□□□ -1.42
TRAV17-201ENST00000390445 MRGPRFQ96AM1 343 aa6.18□□□□□ -1.42
TRAV17-201ENST00000390445 BSCL2Q96G97 398 aaPredicted RBP6.18□□□□□ -1.42
TRAV17-201ENST00000390445 SEC22AQ96IW7 307 aa6.18□□□□□ -1.42
TRAV17-201ENST00000390445 SPAG8Q99932 426 aaPredicted RBP6.18□□□□□ -1.42
TRAV17-201ENST00000390445 FUNDC2Q9BWH2 189 aa6.18□□□□□ -1.42
TRAV17-201ENST00000390445 NAA50Q9GZZ1 169 aaKnown RBP6.18□□□□□ -1.42
TRAV17-201ENST00000390445 DAZ1Q9NQZ3 744 aaKnown RBP6.18□□□□□ -1.42
TRAV17-201ENST00000390445 TMEM14BQ9NUH8 114 aa6.18□□□□□ -1.42
TRAV17-201ENST00000390445 PRNDQ9UKY0 176 aa6.18□□□□□ -1.42
TRAV17-201ENST00000390445 IGKV3-7A0A075B6H7 116 aa6.17□□□□□ -1.42
TRAV17-201ENST00000390445 I3L2K1 104 aa6.17□□□□□ -1.42
TRAV17-201ENST00000390445 CYB5BO43169 146 aa6.17□□□□□ -1.42
TRAV17-201ENST00000390445 APOA1P02647 267 aa6.17□□□□□ -1.42
TRAV17-201ENST00000390445 CTSGP08311 255 aa6.17□□□□□ -1.42
TRAV17-201ENST00000390445 TFPI2P48307 235 aa6.17□□□□□ -1.42
TRAV17-201ENST00000390445 SPSB3Q6PJ21 355 aa6.17□□□□□ -1.42
TRAV17-201ENST00000390445 APRG1Q8IVJ8 170 aa6.17□□□□□ -1.42
TRAV17-201ENST00000390445 SLC38A6Q8IZM9 456 aa6.17□□□□□ -1.42
TRAV17-201ENST00000390445 OR5B3Q8NH48 314 aa6.17□□□□□ -1.42
TRAV17-201ENST00000390445 PINX1Q96BK5 328 aaKnown RBP6.17□□□□□ -1.42
TRAV17-201ENST00000390445 TMEM56Q96MV1 263 aa6.17□□□□□ -1.42
TRAV17-201ENST00000390445 RNF2Q99496 336 aa6.17□□□□□ -1.42
TRAV17-201ENST00000390445 VCX3AQ9NNX9 186 aa6.17□□□□□ -1.42
TRAV17-201ENST00000390445 SMIM31A0A1B0GVY4 71 aa6.16□□□□□ -1.42
TRAV17-201ENST00000390445 CHEK1O14757 476 aa6.16□□□□□ -1.42
TRAV17-201ENST00000390445 SPRY2O43597 315 aa6.16□□□□□ -1.42
TRAV17-201ENST00000390445 TNFAIP8O95379 198 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms