RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 NDUFB8O95169 186 aa4.82□□□□□ -1.64
RFC1-202ENST00000381897 TMEM50AO95807 157 aa4.82□□□□□ -1.64
RFC1-202ENST00000381897 UBE2L3P68036 154 aaKnown RBP4.82□□□□□ -1.64
RFC1-202ENST00000381897 C1orf61Q13536 156 aa4.82□□□□□ -1.64
RFC1-202ENST00000381897 IGFBP7Q16270 282 aa4.82□□□□□ -1.64
RFC1-202ENST00000381897 MUC21Q5SSG8 566 aa4.82□□□□□ -1.64
RFC1-202ENST00000381897 ZFAND6Q6FIF0 208 aa4.82□□□□□ -1.64
RFC1-202ENST00000381897 C1orf174Q8IYL3 243 aa4.82□□□□□ -1.64
RFC1-202ENST00000381897 IGHV1-69-2A0A0G2JMI3 117 aa4.81□□□□□ -1.64
RFC1-202ENST00000381897 A0A1B0GX78 115 aa4.81□□□□□ -1.64
RFC1-202ENST00000381897 C2CD4DB7Z1M9 353 aa4.81□□□□□ -1.64
RFC1-202ENST00000381897 MGST3O14880 152 aa4.81□□□□□ -1.64
RFC1-202ENST00000381897 SYNGR3O43761 229 aa4.81□□□□□ -1.64
RFC1-202ENST00000381897 TSPAN2O60636 221 aa4.81□□□□□ -1.64
RFC1-202ENST00000381897 SELEP16581 610 aa4.81□□□□□ -1.64
RFC1-202ENST00000381897 PARM1Q6UWI2 310 aa4.81□□□□□ -1.64
RFC1-202ENST00000381897 TCF24Q7RTU0 167 aa4.81□□□□□ -1.64
RFC1-202ENST00000381897 OR5A2Q8NGI9 324 aa4.81□□□□□ -1.64
RFC1-202ENST00000381897 ALKBH3Q96Q83 286 aaPredicted RBP4.81□□□□□ -1.64
RFC1-202ENST00000381897 KIF26AQ9ULI4 1882 aaPredicted RBP4.81□□□□□ -1.64
RFC1-202ENST00000381897 A0A1W2PR77 199 aa4.81□□□□□ -1.64
RFC1-202ENST00000381897 LINC00473A8K010 186 aa4.81□□□□□ -1.64
RFC1-202ENST00000381897 SAP30O75446 220 aa4.81□□□□□ -1.64
RFC1-202ENST00000381897 PGLYRP1O75594 196 aaPredicted RBP4.81□□□□□ -1.64
RFC1-202ENST00000381897 LINC00869P0C866 280 aa4.81□□□□□ -1.64
RFC1-202ENST00000381897 PPP1CAP62136 330 aa4.81□□□□□ -1.64
RFC1-202ENST00000381897 CCL4L1Q8NHW4 92 aa4.81□□□□□ -1.64
RFC1-202ENST00000381897 APOBEC3DQ96AK3 386 aaPredicted RBP4.81□□□□□ -1.64
RFC1-202ENST00000381897 VKORC1Q9BQB6 163 aa4.81□□□□□ -1.64
RFC1-202ENST00000381897 A0A0A0MQY5 61 aa4.81□□□□□ -1.64
RFC1-202ENST00000381897 DPM2O94777 84 aa4.81□□□□□ -1.64
RFC1-202ENST00000381897 PSG2P11465 335 aa4.81□□□□□ -1.64
RFC1-202ENST00000381897 CEACAM8P31997 349 aaPredicted RBP4.81□□□□□ -1.64
RFC1-202ENST00000381897 TFPI2P48307 235 aa4.81□□□□□ -1.64
RFC1-202ENST00000381897 PIGYQ3MUY2 71 aa4.81□□□□□ -1.64
RFC1-202ENST00000381897 MAP1LC3CQ9BXW4 147 aa4.81□□□□□ -1.64
RFC1-202ENST00000381897 GNB1LQ9BYB4 327 aa4.81□□□□□ -1.64
RFC1-202ENST00000381897 DKK4Q9UBT3 224 aa4.81□□□□□ -1.64
RFC1-202ENST00000381897 SCN5AQ14524 2016 aa4.81□□□□□ -1.64
RFC1-202ENST00000381897 TRAV9-2A0A087WT02 112 aa4.81□□□□□ -1.64
RFC1-202ENST00000381897 A0A1W2PRS3 328 aa4.81□□□□□ -1.64
RFC1-202ENST00000381897 CRYBA4P53673 196 aa4.81□□□□□ -1.64
RFC1-202ENST00000381897 UBE2G1P62253 170 aa4.81□□□□□ -1.64
RFC1-202ENST00000381897 MRPS11P82912 194 aaKnown RBP4.81□□□□□ -1.64
RFC1-202ENST00000381897 Q8IYB0 196 aa4.81□□□□□ -1.64
RFC1-202ENST00000381897 SAXO1Q8IYX7 474 aa4.81□□□□□ -1.64
RFC1-202ENST00000381897 LRRC75A-AS1Q8N1F1 130 aa4.81□□□□□ -1.64
RFC1-202ENST00000381897 FOXA2Q9Y261 457 aaPredicted RBP4.81□□□□□ -1.64
RFC1-202ENST00000381897 F5P12259 2224 aa4.81□□□□□ -1.64
RFC1-202ENST00000381897 VWA8A3KMH1 1905 aa4.81□□□□□ -1.64
RFC1-202ENST00000381897 TP53BP1Q12888 1972 aaPredicted RBP4.81□□□□□ -1.64
RFC1-202ENST00000381897 TEX50A0A1B0GTY4 177 aa4.8□□□□□ -1.64
RFC1-202ENST00000381897 K7EP13 123 aa4.8□□□□□ -1.64
RFC1-202ENST00000381897 PLAUP00749 431 aa4.8□□□□□ -1.64
RFC1-202ENST00000381897 PAX1P15863 534 aa4.8□□□□□ -1.64
RFC1-202ENST00000381897 SRD5A1P18405 259 aa4.8□□□□□ -1.64
RFC1-202ENST00000381897 EDDM3BP56851 147 aa4.8□□□□□ -1.64
RFC1-202ENST00000381897 Q0VG73 95 aa4.8□□□□□ -1.64
RFC1-202ENST00000381897 ZNF818PQ6ZRF7 136 aa4.8□□□□□ -1.64
RFC1-202ENST00000381897 STPG4Q8N801 248 aa4.8□□□□□ -1.64
RFC1-202ENST00000381897 ZNF721Q8TF20 911 aa4.8□□□□□ -1.64
RFC1-202ENST00000381897 SNRNP40Q96DI7 357 aaKnown RBP4.8□□□□□ -1.64
RFC1-202ENST00000381897 SH2D2AQ9NP31 389 aa4.8□□□□□ -1.64
RFC1-202ENST00000381897 KIAA1671Q9BY89 1806 aa4.8□□□□□ -1.64
RFC1-202ENST00000381897 HELZP42694 1942 aaKnown RBP4.8□□□□□ -1.64
RFC1-202ENST00000381897 ASCC3Q8N3C0 2202 aaKnown RBP4.8□□□□□ -1.64
RFC1-202ENST00000381897 TRAV8-1A0A0A6YYK1 113 aa4.8□□□□□ -1.64
RFC1-202ENST00000381897 CT45A6P0DMU7 189 aa4.8□□□□□ -1.64
RFC1-202ENST00000381897 CT45A5P0DMU8 189 aa4.8□□□□□ -1.64
RFC1-202ENST00000381897 CT45A7P0DMV0 189 aa4.8□□□□□ -1.64
RFC1-202ENST00000381897 CBLN1P23435 193 aa4.8□□□□□ -1.64
RFC1-202ENST00000381897 Q56UQ5 140 aa4.8□□□□□ -1.64
RFC1-202ENST00000381897 SLC25A53Q5H9E4 307 aa4.8□□□□□ -1.64
RFC1-202ENST00000381897 CT45A1Q5HYN5 189 aa4.8□□□□□ -1.64
RFC1-202ENST00000381897 C9orf153Q5TBE3 101 aa4.8□□□□□ -1.64
RFC1-202ENST00000381897 CT45A3Q8NHU0 189 aa4.8□□□□□ -1.64
RFC1-202ENST00000381897 OR5P3Q8WZ94 311 aa4.8□□□□□ -1.64
RFC1-202ENST00000381897 DUX3Q96PT4 197 aa4.8□□□□□ -1.64
RFC1-202ENST00000381897 OR2V2Q96R30 315 aa4.8□□□□□ -1.64
RFC1-202ENST00000381897 SCN2AQ99250 2005 aa4.8□□□□□ -1.64
RFC1-202ENST00000381897 PNRC2Q9NPJ4 139 aaKnown RBP4.8□□□□□ -1.64
RFC1-202ENST00000381897 ZNF835Q9Y2P0 537 aa4.8□□□□□ -1.64
RFC1-202ENST00000381897 MTCL1Q9Y4B5 1905 aaKnown RBP4.8□□□□□ -1.64
RFC1-202ENST00000381897 TIMM8BQ9Y5J9 83 aaPredicted RBP4.8□□□□□ -1.64
RFC1-202ENST00000381897 TRAV17A0A0B4J275 112 aa4.8□□□□□ -1.64
RFC1-202ENST00000381897 ISLRO14498 428 aa4.8□□□□□ -1.64
RFC1-202ENST00000381897 FOXS1O43638 330 aa4.8□□□□□ -1.64
RFC1-202ENST00000381897 EDDM3AQ14507 147 aa4.8□□□□□ -1.64
RFC1-202ENST00000381897 FBXW9Q5XUX1 488 aa4.8□□□□□ -1.64
RFC1-202ENST00000381897 NEUROG1Q92886 237 aa4.8□□□□□ -1.64
RFC1-202ENST00000381897 LDLRAD2Q5SZI1 272 aa4.8□□□□□ -1.64
RFC1-202ENST00000381897 SPATA46Q5T0L3 261 aa4.8□□□□□ -1.64
RFC1-202ENST00000381897 MORN5Q5VZ52 161 aa4.8□□□□□ -1.64
RFC1-202ENST00000381897 SMRP1Q8NCR6 262 aa4.8□□□□□ -1.64
RFC1-202ENST00000381897 C1orf159Q96HA4 380 aa4.8□□□□□ -1.64
RFC1-202ENST00000381897 RTL8AQ9BWD3 113 aa4.8□□□□□ -1.64
RFC1-202ENST00000381897 NDUFS5O43920 106 aa4.79□□□□□ -1.64
RFC1-202ENST00000381897 ZNF324O75467 553 aaPredicted RBP4.79□□□□□ -1.64
RFC1-202ENST00000381897 EFEMP2O95967 443 aa4.79□□□□□ -1.64
RFC1-202ENST00000381897 UTF1Q5T230 341 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms