RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 FUNDC2Q9BWH2 189 aa12.75□□□□□ -0.37
HMGN1-204ENST00000380749 MAP6D1Q9H9H5 199 aa12.75□□□□□ -0.37
HMGN1-204ENST00000380749 IGHV3-49A0A0A0MS15 119 aa12.74□□□□□ -0.37
HMGN1-204ENST00000380749 TRAV14DV4A0A0A6YYC5 116 aa12.74□□□□□ -0.37
HMGN1-204ENST00000380749 M0QYG6 137 aa12.74□□□□□ -0.37
HMGN1-204ENST00000380749 HPGDSO60760 199 aa12.74□□□□□ -0.37
HMGN1-204ENST00000380749 CD5P06127 495 aa12.74□□□□□ -0.37
HMGN1-204ENST00000380749 PGAM2P15259 253 aa12.74□□□□□ -0.37
HMGN1-204ENST00000380749 ELK1P19419 428 aa12.74□□□□□ -0.37
HMGN1-204ENST00000380749 TFPI2P48307 235 aa12.74□□□□□ -0.37
HMGN1-204ENST00000380749 AKR1C2P52895 323 aa12.74□□□□□ -0.37
HMGN1-204ENST00000380749 RND3P61587 244 aa12.74□□□□□ -0.37
HMGN1-204ENST00000380749 RNASE10Q5GAN6 216 aaKnown RBP12.74□□□□□ -0.37
HMGN1-204ENST00000380749 SLC35G3Q8N808 338 aa12.74□□□□□ -0.37
HMGN1-204ENST00000380749 AP3S1Q92572 193 aa12.74□□□□□ -0.37
HMGN1-204ENST00000380749 KLK5Q9Y337 293 aaPredicted RBP12.74□□□□□ -0.37
HMGN1-204ENST00000380749 IGKV3-7A0A075B6H7 116 aa12.73□□□□□ -0.37
HMGN1-204ENST00000380749 FAM25AB3EWG3 89 aa12.73□□□□□ -0.37
HMGN1-204ENST00000380749 FAM25CB3EWG5 89 aa12.73□□□□□ -0.37
HMGN1-204ENST00000380749 FAM25GB3EWG6 89 aa12.73□□□□□ -0.37
HMGN1-204ENST00000380749 ATG12O94817 140 aa12.73□□□□□ -0.37
HMGN1-204ENST00000380749 LY6G6CO95867 125 aa12.73□□□□□ -0.37
HMGN1-204ENST00000380749 IGHV3-48P01763 117 aa12.73□□□□□ -0.37
HMGN1-204ENST00000380749 SNCAP37840 140 aa12.73□□□□□ -0.37
HMGN1-204ENST00000380749 NPBWR1P48145 328 aa12.73□□□□□ -0.37
HMGN1-204ENST00000380749 RORCP51449 518 aa12.73□□□□□ -0.37
HMGN1-204ENST00000380749 PAFAH1B2P68402 229 aa12.73□□□□□ -0.37
HMGN1-204ENST00000380749 EWSR1Q01844 656 aaKnown RBP eCLIP12.73□□□□□ -0.37
HMGN1-204ENST00000380749 MZT2AQ6P582 158 aa12.73□□□□□ -0.37
HMGN1-204ENST00000380749 CEMP1Q6PRD7 247 aaPredicted RBP12.73□□□□□ -0.37
HMGN1-204ENST00000380749 APRG1Q8IVJ8 170 aa12.73□□□□□ -0.37
HMGN1-204ENST00000380749 PDCD10Q9BUL8 212 aa12.73□□□□□ -0.37
HMGN1-204ENST00000380749 PIGPP57054 158 aa12.72□□□□□ -0.37
HMGN1-204ENST00000380749 SPINK9Q5DT21 86 aa12.72□□□□□ -0.37
HMGN1-204ENST00000380749 RNASE12Q5GAN4 147 aaKnown RBP12.72□□□□□ -0.37
HMGN1-204ENST00000380749 ARRDC1Q8N5I2 433 aa12.72□□□□□ -0.37
HMGN1-204ENST00000380749 DUSP18Q8NEJ0 188 aa12.72□□□□□ -0.37
HMGN1-204ENST00000380749 ZNF414Q96IQ9 312 aa12.72□□□□□ -0.37
HMGN1-204ENST00000380749 IGHV3OR16-13A0A075B7E8 117 aa12.71□□□□□ -0.37
HMGN1-204ENST00000380749 IGHV3-74A0A0B4J1X5 117 aa12.71□□□□□ -0.37
HMGN1-204ENST00000380749 MPTX1A8MV57 137 aa12.71□□□□□ -0.37
HMGN1-204ENST00000380749 CORTO00230 105 aa12.71□□□□□ -0.37
HMGN1-204ENST00000380749 IFNA17P01571 189 aa12.71□□□□□ -0.37
HMGN1-204ENST00000380749 TBPP20226 339 aa12.71□□□□□ -0.37
HMGN1-204ENST00000380749 TCF24Q7RTU0 167 aa12.71□□□□□ -0.37
HMGN1-204ENST00000380749 GATAD1Q8WUU5 269 aa12.71□□□□□ -0.37
HMGN1-204ENST00000380749 CSTL1Q9H114 145 aa12.71□□□□□ -0.37
HMGN1-204ENST00000380749 ST8SIA3O43173 380 aa12.7□□□□□ -0.38
HMGN1-204ENST00000380749 PI3P19957 117 aa12.7□□□□□ -0.38
HMGN1-204ENST00000380749 HOXA1P49639 335 aaPredicted RBP12.7□□□□□ -0.38
HMGN1-204ENST00000380749 PPP5CP53041 499 aa12.7□□□□□ -0.38
HMGN1-204ENST00000380749 ZNF124Q15973 351 aa12.7□□□□□ -0.38
HMGN1-204ENST00000380749 IZUMO4Q1ZYL8 232 aa12.7□□□□□ -0.38
HMGN1-204ENST00000380749 FAM90A2PQ658T7 463 aa12.7□□□□□ -0.38
HMGN1-204ENST00000380749 TOMM20LQ6UXN7 152 aa12.7□□□□□ -0.38
HMGN1-204ENST00000380749 ZNF600Q6ZNG1 722 aa12.7□□□□□ -0.38
HMGN1-204ENST00000380749 LHFPL1Q86WI0 220 aa12.7□□□□□ -0.38
HMGN1-204ENST00000380749 GBGT1Q8N5D6 347 aa12.7□□□□□ -0.38
HMGN1-204ENST00000380749 CCDC71LQ8N9Z2 235 aa12.7□□□□□ -0.38
HMGN1-204ENST00000380749 TP53RKQ96S44 253 aa12.7□□□□□ -0.38
HMGN1-204ENST00000380749 TMEM231Q9H6L2 316 aa12.7□□□□□ -0.38
HMGN1-204ENST00000380749 COPZ2Q9P299 210 aa12.7□□□□□ -0.38
HMGN1-204ENST00000380749 INS-IGF2F8WCM5 200 aa12.69□□□□□ -0.38
HMGN1-204ENST00000380749 SCGB2A1O75556 95 aa12.69□□□□□ -0.38
HMGN1-204ENST00000380749 IGKV1-5P01602 117 aa12.69□□□□□ -0.38
HMGN1-204ENST00000380749 SUB1P53999 127 aaKnown RBP eCLIP12.69□□□□□ -0.385e-59■■■■■ 41.6
HMGN1-204ENST00000380749 TRIM16LQ309B1 348 aa12.69□□□□□ -0.38
HMGN1-204ENST00000380749 RNASE11Q8TAA1 199 aaKnown RBP12.69□□□□□ -0.38
HMGN1-204ENST00000380749 C15orf40Q8WUR7 153 aa12.69□□□□□ -0.38
HMGN1-204ENST00000380749 ENY2Q9NPA8 101 aa12.69□□□□□ -0.38
HMGN1-204ENST00000380749 EXTL2Q9UBQ6 330 aa12.69□□□□□ -0.38
HMGN1-204ENST00000380749 KLK11Q9UBX7 282 aa12.69□□□□□ -0.38
HMGN1-204ENST00000380749 C3orf85A0A1B0GTC6 90 aa12.69□□□□□ -0.38
HMGN1-204ENST00000380749 DNASE2O00115 360 aaPredicted RBP12.69□□□□□ -0.38
HMGN1-204ENST00000380749 CD3DP04234 171 aa12.69□□□□□ -0.38
HMGN1-204ENST00000380749 OR52I2Q8NH67 350 aa12.69□□□□□ -0.38
HMGN1-204ENST00000380749 ZFAND1Q8TCF1 268 aa12.69□□□□□ -0.38
HMGN1-204ENST00000380749 ST8SIA2Q92186 375 aa12.69□□□□□ -0.38
HMGN1-204ENST00000380749 RRNAD1Q96FB5 475 aaKnown RBP12.69□□□□□ -0.38
HMGN1-204ENST00000380749 VSIRQ9H7M9 311 aa12.69□□□□□ -0.38
HMGN1-204ENST00000380749 MTFP1Q9UDX5 166 aa12.69□□□□□ -0.38
HMGN1-204ENST00000380749 PUS1Q9Y606 427 aaKnown RBP eCLIP12.69□□□□□ -0.38
HMGN1-204ENST00000380749 A0A0B4J293 547 aa12.68□□□□□ -0.38
HMGN1-204ENST00000380749 DFFBO76075 338 aa12.68□□□□□ -0.38
HMGN1-204ENST00000380749 P0C879 139 aa12.68□□□□□ -0.38
HMGN1-204ENST00000380749 RPL11P62913 178 aaKnown RBP12.68□□□□□ -0.38
HMGN1-204ENST00000380749 RARRES2Q99969 163 aa12.68□□□□□ -0.38
HMGN1-204ENST00000380749 C11orf68Q9H3H3 251 aaKnown RBP12.68□□□□□ -0.38
HMGN1-204ENST00000380749 ZFAND3Q9H8U3 227 aa12.68□□□□□ -0.38
HMGN1-204ENST00000380749 TRAV2A0A0B4J234 112 aa12.67□□□□□ -0.38
HMGN1-204ENST00000380749 B3GALNT1O75752 331 aa12.67□□□□□ -0.38
HMGN1-204ENST00000380749 GABARAPO95166 117 aa12.67□□□□□ -0.38
HMGN1-204ENST00000380749 CA1P00915 261 aaPredicted RBP12.67□□□□□ -0.38
HMGN1-204ENST00000380749 RNASE2P10153 161 aaKnown RBP12.67□□□□□ -0.38
HMGN1-204ENST00000380749 ZNF182P17025 639 aaPredicted RBP12.67□□□□□ -0.38
HMGN1-204ENST00000380749 OPRK1P41145 380 aa12.67□□□□□ -0.38
HMGN1-204ENST00000380749 TAS2R19P59542 299 aa12.67□□□□□ -0.38
HMGN1-204ENST00000380749 SCGB2B2Q4G0G5 96 aa12.67□□□□□ -0.38
HMGN1-204ENST00000380749 PHLDA1Q8WV24 401 aaPredicted RBP12.67□□□□□ -0.38
HMGN1-204ENST00000380749 MFFQ9GZY8 342 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms