RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 RABAC1Q9UI14 185 aa12.93□□□□□ -0.34
PDLIM4-202ENST00000379018 PKHD1P08F94 4074 aa12.93□□□□□ -0.34
PDLIM4-202ENST00000379018 A0A1B0GVY2 172 aa12.92□□□□□ -0.34
PDLIM4-202ENST00000379018 CCDC160A6NGH7 325 aa12.92□□□□□ -0.34
PDLIM4-202ENST00000379018 PRSS29PA6NIE9 313 aa12.92□□□□□ -0.34
PDLIM4-202ENST00000379018 GNG7O60262 68 aa12.92□□□□□ -0.34
PDLIM4-202ENST00000379018 GABARAPO95166 117 aa12.92□□□□□ -0.34
PDLIM4-202ENST00000379018 APOHP02749 345 aaPredicted RBP12.92□□□□□ -0.34
PDLIM4-202ENST00000379018 MED14OSP0DP75 135 aa12.92□□□□□ -0.34
PDLIM4-202ENST00000379018 SFXN4Q6P4A7 337 aa12.92□□□□□ -0.34
PDLIM4-202ENST00000379018 ZNF767PQ75MW2 155 aa12.92□□□□□ -0.34
PDLIM4-202ENST00000379018 OR5H6Q8NGV6 325 aa12.92□□□□□ -0.34
PDLIM4-202ENST00000379018 OR10C1Q96KK4 312 aa12.92□□□□□ -0.34
PDLIM4-202ENST00000379018 TXNL4BQ9NX01 149 aaKnown RBP12.92□□□□□ -0.34
PDLIM4-202ENST00000379018 TRAV10A0A0B4J240 114 aa12.91□□□□□ -0.34
PDLIM4-202ENST00000379018 DBX1A6NMT0 343 aa12.91□□□□□ -0.34
PDLIM4-202ENST00000379018 DFFBO76075 338 aa12.91□□□□□ -0.34
PDLIM4-202ENST00000379018 MT-CO2P00403 227 aa12.91□□□□□ -0.34
PDLIM4-202ENST00000379018 FGF2P09038 288 aa12.91□□□□□ -0.34
PDLIM4-202ENST00000379018 F2RP25116 425 aa12.91□□□□□ -0.34
PDLIM4-202ENST00000379018 MXD1Q05195 221 aa12.91□□□□□ -0.34
PDLIM4-202ENST00000379018 LILRB2Q8N423 598 aa12.91□□□□□ -0.34
PDLIM4-202ENST00000379018 OR1P1Q8NH06 330 aa12.91□□□□□ -0.34
PDLIM4-202ENST00000379018 GINS3Q9BRX5 216 aa12.91□□□□□ -0.34
PDLIM4-202ENST00000379018 NXF2Q9GZY0 626 aaKnown RBP12.91□□□□□ -0.34
PDLIM4-202ENST00000379018 CLEC5AQ9NY25 188 aa12.91□□□□□ -0.34
PDLIM4-202ENST00000379018 EHFQ9NZC4 300 aa12.91□□□□□ -0.34
PDLIM4-202ENST00000379018 PRNDQ9UKY0 176 aa12.91□□□□□ -0.34
PDLIM4-202ENST00000379018 I3L2K1 104 aa12.9□□□□□ -0.34
PDLIM4-202ENST00000379018 CLEC2LP0C7M8 214 aa12.9□□□□□ -0.34
PDLIM4-202ENST00000379018 PSMB9P28065 219 aa12.9□□□□□ -0.34
PDLIM4-202ENST00000379018 GNRHRP30968 328 aa12.9□□□□□ -0.34
PDLIM4-202ENST00000379018 TPRA1Q86W33 373 aa12.9□□□□□ -0.34
PDLIM4-202ENST00000379018 SLC25A38Q96DW6 304 aa12.9□□□□□ -0.34
PDLIM4-202ENST00000379018 HRH4Q9H3N8 390 aa12.9□□□□□ -0.34
PDLIM4-202ENST00000379018 IFT46Q9NQC8 304 aa12.9□□□□□ -0.34
PDLIM4-202ENST00000379018 FAT2Q9NYQ8 4349 aa12.89□□□□□ -0.35
PDLIM4-202ENST00000379018 ELOA3CA0A087WX78 387 aaPredicted RBP12.89□□□□□ -0.35
PDLIM4-202ENST00000379018 KNCNA6PVL3 124 aa12.89□□□□□ -0.35
PDLIM4-202ENST00000379018 PGLYRP1O75594 196 aaPredicted RBP12.89□□□□□ -0.35
PDLIM4-202ENST00000379018 NEDD8Q15843 81 aa12.89□□□□□ -0.35
PDLIM4-202ENST00000379018 IDNKQ5T6J7 187 aa12.89□□□□□ -0.35
PDLIM4-202ENST00000379018 TOMM20LQ6UXN7 152 aa12.89□□□□□ -0.35
PDLIM4-202ENST00000379018 STXBP6Q8NFX7 210 aa12.89□□□□□ -0.35
PDLIM4-202ENST00000379018 OR5AP2Q8NGF4 316 aa12.89□□□□□ -0.35
PDLIM4-202ENST00000379018 ZNF2Q9BSG1 426 aaPredicted RBP12.89□□□□□ -0.35
PDLIM4-202ENST00000379018 DNAH2Q9P225 4427 aa12.88□□□□□ -0.35
PDLIM4-202ENST00000379018 C4BPBP20851 252 aa12.88□□□□□ -0.35
PDLIM4-202ENST00000379018 RFX2P48378 723 aa12.88□□□□□ -0.35
PDLIM4-202ENST00000379018 SPINK9Q5DT21 86 aa12.88□□□□□ -0.35
PDLIM4-202ENST00000379018 PVRIGQ6DKI7 326 aa12.88□□□□□ -0.35
PDLIM4-202ENST00000379018 BORCS5Q969J3 196 aa12.88□□□□□ -0.35
PDLIM4-202ENST00000379018 MOB3AQ96BX8 217 aa12.88□□□□□ -0.35
PDLIM4-202ENST00000379018 YIPF6Q96EC8 236 aa12.88□□□□□ -0.35
PDLIM4-202ENST00000379018 AUNIPQ9H7T9 357 aa12.88□□□□□ -0.35
PDLIM4-202ENST00000379018 FKBP11Q9NYL4 201 aa12.88□□□□□ -0.35
PDLIM4-202ENST00000379018 CELA1Q9UNI1 258 aa12.88□□□□□ -0.35
PDLIM4-202ENST00000379018 PUS1Q9Y606 427 aaKnown RBP eCLIP12.88□□□□□ -0.35
PDLIM4-202ENST00000379018 PMP2P02689 132 aa12.87□□□□□ -0.35
PDLIM4-202ENST00000379018 GIG44P09565 113 aaPredicted RBP12.87□□□□□ -0.35
PDLIM4-202ENST00000379018 MIFP14174 115 aa12.87□□□□□ -0.35
PDLIM4-202ENST00000379018 SDC2P34741 201 aa12.87□□□□□ -0.35
PDLIM4-202ENST00000379018 GPR107Q5VW38 600 aa12.87□□□□□ -0.35
PDLIM4-202ENST00000379018 TXN2Q99757 166 aa12.87□□□□□ -0.35
PDLIM4-202ENST00000379018 VSIRQ9H7M9 311 aa12.87□□□□□ -0.35
PDLIM4-202ENST00000379018 SSR3Q9UNL2 185 aa12.87□□□□□ -0.35
PDLIM4-202ENST00000379018 DEFB131BA0A096LNP1 70 aa12.86□□□□□ -0.35
PDLIM4-202ENST00000379018 RTL8CO15255 209 aa12.86□□□□□ -0.35
PDLIM4-202ENST00000379018 CD5P06127 495 aa12.86□□□□□ -0.35
PDLIM4-202ENST00000379018 ZNF688P0C7X2 276 aa12.86□□□□□ -0.35
PDLIM4-202ENST00000379018 FGF9P31371 208 aaPredicted RBP12.86□□□□□ -0.35
PDLIM4-202ENST00000379018 CTF1Q16619 201 aa12.86□□□□□ -0.35
PDLIM4-202ENST00000379018 PHLDA2Q53GA4 152 aa12.86□□□□□ -0.35
PDLIM4-202ENST00000379018 TRPT1Q86TN4 253 aaKnown RBP12.86□□□□□ -0.35
PDLIM4-202ENST00000379018 CROCCP3Q8IVE0 287 aa12.86□□□□□ -0.35
PDLIM4-202ENST00000379018 CMTM1Q8IZ96 169 aa12.86□□□□□ -0.35
PDLIM4-202ENST00000379018 POM121L12Q8N7R1 296 aa12.86□□□□□ -0.35
PDLIM4-202ENST00000379018 DUSP18Q8NEJ0 188 aa12.86□□□□□ -0.35
PDLIM4-202ENST00000379018 OR4A16Q8NH70 328 aa12.86□□□□□ -0.35
PDLIM4-202ENST00000379018 RNF126Q9BV68 326 aa12.86□□□□□ -0.35
PDLIM4-202ENST00000379018 FUNDC2Q9BWH2 189 aa12.86□□□□□ -0.35
PDLIM4-202ENST00000379018 SCRT1Q9BWW7 348 aa12.86□□□□□ -0.35
PDLIM4-202ENST00000379018 FXYD6Q9H0Q3 95 aa12.86□□□□□ -0.35
PDLIM4-202ENST00000379018 RNF167Q9H6Y7 350 aa12.86□□□□□ -0.35
PDLIM4-202ENST00000379018 DIABLOQ9NR28 239 aa12.86□□□□□ -0.35
PDLIM4-202ENST00000379018 TMEM14BQ9NUH8 114 aa12.86□□□□□ -0.35
PDLIM4-202ENST00000379018 X6R8D5 127 aa12.86□□□□□ -0.35
PDLIM4-202ENST00000379018 DNAH17Q9UFH2 4485 aa12.86□□□□□ -0.35
PDLIM4-202ENST00000379018 CBX5P45973 191 aa12.85□□□□□ -0.35
PDLIM4-202ENST00000379018 ACTL10Q5JWF8 245 aa12.85□□□□□ -0.35
PDLIM4-202ENST00000379018 TBC1D24Q9ULP9 559 aa12.85□□□□□ -0.35
PDLIM4-202ENST00000379018 GPR31O00270 319 aa12.84□□□□□ -0.35
PDLIM4-202ENST00000379018 P0DMU3 169 aa12.84□□□□□ -0.35
PDLIM4-202ENST00000379018 FAM231AP0DMU4 169 aa12.84□□□□□ -0.35
PDLIM4-202ENST00000379018 FAM231CP0DMU5 169 aa12.84□□□□□ -0.35
PDLIM4-202ENST00000379018 SPP1P10451 314 aa12.84□□□□□ -0.35
PDLIM4-202ENST00000379018 MORN3Q6PF18 240 aaPredicted RBP12.84□□□□□ -0.35
PDLIM4-202ENST00000379018 ZNF600Q6ZNG1 722 aa12.84□□□□□ -0.35
PDLIM4-202ENST00000379018 H2BFWTQ7Z2G1 175 aa12.84□□□□□ -0.35
PDLIM4-202ENST00000379018 OR5H2Q8NGV7 314 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms