RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 C5orf52A6NGY3 159 aa9.4□□□□□ -0.9
RPGR-203ENST00000378505 C1QTNF9BB2RNN3 333 aa9.4□□□□□ -0.9
RPGR-203ENST00000378505 ETV2O00321 342 aaPredicted RBP9.4□□□□□ -0.9
RPGR-203ENST00000378505 TCF21O43680 179 aa9.4□□□□□ -0.9
RPGR-203ENST00000378505 MBNL2Q5VZF2 373 aaKnown RBP9.4□□□□□ -0.9
RPGR-203ENST00000378505 GPR82Q96P67 336 aa9.4□□□□□ -0.9
RPGR-203ENST00000378505 USF3Q68DE3 2245 aa9.4□□□□□ -0.9
RPGR-203ENST00000378505 CIDEAO60543 219 aa9.4□□□□□ -0.9
RPGR-203ENST00000378505 OR9G9P0C7N8 305 aa9.4□□□□□ -0.9
RPGR-203ENST00000378505 RNF224P0DH78 156 aa9.4□□□□□ -0.9
RPGR-203ENST00000378505 PRCDQ00LT1 54 aa9.4□□□□□ -0.9
RPGR-203ENST00000378505 CD69Q07108 199 aa9.4□□□□□ -0.9
RPGR-203ENST00000378505 TMEM70Q9BUB7 260 aa9.4□□□□□ -0.9
RPGR-203ENST00000378505 A0A1W2PRE2 83 aa9.4□□□□□ -0.91
RPGR-203ENST00000378505 K7ERU9 68 aa9.4□□□□□ -0.91
RPGR-203ENST00000378505 IGKV1D-33P01593 117 aa9.4□□□□□ -0.91
RPGR-203ENST00000378505 IGKV1-33P01594 117 aa9.4□□□□□ -0.91
RPGR-203ENST00000378505 TEX45Q8NA69 505 aa9.4□□□□□ -0.91
RPGR-203ENST00000378505 ZNF502Q8TBZ5 544 aa9.4□□□□□ -0.91
RPGR-203ENST00000378505 FOXA2Q9Y261 457 aaPredicted RBP9.4□□□□□ -0.91
RPGR-203ENST00000378505 SOX21Q9Y651 276 aaPredicted RBP9.4□□□□□ -0.91
RPGR-203ENST00000378505 A0A1B0GUT8 65 aa9.39□□□□□ -0.91
RPGR-203ENST00000378505 Q6ZS49 121 aa9.39□□□□□ -0.91
RPGR-203ENST00000378505 RPUSD1Q9UJJ7 312 aaKnown RBP9.39□□□□□ -0.91
RPGR-203ENST00000378505 C1QTNF9P0C862 333 aa9.39□□□□□ -0.91
RPGR-203ENST00000378505 DLX6P56179 175 aa9.39□□□□□ -0.91
RPGR-203ENST00000378505 TCTAP57738 103 aa9.39□□□□□ -0.91
RPGR-203ENST00000378505 ASCL4Q6XD76 172 aa9.39□□□□□ -0.91
RPGR-203ENST00000378505 TMEM170AQ8WVE7 144 aa9.39□□□□□ -0.91
RPGR-203ENST00000378505 DCAF16Q9NXF7 216 aa9.39□□□□□ -0.91
RPGR-203ENST00000378505 COLCA2A8K830 154 aa9.39□□□□□ -0.91
RPGR-203ENST00000378505 SIAH2O43255 324 aa9.39□□□□□ -0.91
RPGR-203ENST00000378505 HEPN1Q6WQI6 88 aa9.39□□□□□ -0.91
RPGR-203ENST00000378505 ZCCHC24Q8N2G6 241 aaKnown RBP9.39□□□□□ -0.91
RPGR-203ENST00000378505 TMEM133Q9H2Q1 129 aa9.39□□□□□ -0.91
RPGR-203ENST00000378505 A0A1B0GW64 132 aa9.39□□□□□ -0.91
RPGR-203ENST00000378505 M0R3E3 92 aa9.39□□□□□ -0.91
RPGR-203ENST00000378505 IGKV1-5P01602 117 aa9.39□□□□□ -0.91
RPGR-203ENST00000378505 TMEM136Q6ZRR5 245 aa9.39□□□□□ -0.91
RPGR-203ENST00000378505 ATOH7Q8N100 152 aa9.39□□□□□ -0.91
RPGR-203ENST00000378505 SYT8Q8NBV8 401 aa9.39□□□□□ -0.91
RPGR-203ENST00000378505 FBXL7Q9UJT9 491 aa9.39□□□□□ -0.91
RPGR-203ENST00000378505 FOXI3A8MTJ6 420 aaPredicted RBP9.38□□□□□ -0.91
RPGR-203ENST00000378505 HIST1H2BKO60814 126 aa9.38□□□□□ -0.91
RPGR-203ENST00000378505 IGHV1-46P01743 117 aa9.38□□□□□ -0.91
RPGR-203ENST00000378505 HIST1H2BJP06899 126 aa9.38□□□□□ -0.91
RPGR-203ENST00000378505 HIST1H2BOP23527 126 aa9.38□□□□□ -0.91
RPGR-203ENST00000378505 HIST1H2BBP33778 126 aa9.38□□□□□ -0.91
RPGR-203ENST00000378505 TIMP3P35625 211 aa9.38□□□□□ -0.91
RPGR-203ENST00000378505 HIST1H2BDP58876 126 aa9.38□□□□□ -0.91
RPGR-203ENST00000378505 HIST1H2BCP62807 126 aa9.38□□□□□ -0.91
RPGR-203ENST00000378505 EFNB3Q15768 340 aa9.38□□□□□ -0.91
RPGR-203ENST00000378505 HIST2H2BEQ16778 126 aa9.38□□□□□ -0.91
RPGR-203ENST00000378505 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.38□□□□□ -0.91
RPGR-203ENST00000378505 MDS2Q8NDY4 140 aa9.38□□□□□ -0.91
RPGR-203ENST00000378505 HIST1H2BHQ93079 126 aa9.38□□□□□ -0.91
RPGR-203ENST00000378505 HIST1H2BNQ99877 126 aa9.38□□□□□ -0.91
RPGR-203ENST00000378505 HIST1H2BMQ99879 126 aa9.38□□□□□ -0.91
RPGR-203ENST00000378505 VSIRQ9H7M9 311 aa9.38□□□□□ -0.91
RPGR-203ENST00000378505 TMEM242Q9NWH2 141 aa9.38□□□□□ -0.91
RPGR-203ENST00000378505 TBL2Q9Y4P3 447 aaKnown RBP9.38□□□□□ -0.91
RPGR-203ENST00000378505 TRBV24-1A0A075B6N3 115 aa9.38□□□□□ -0.91
RPGR-203ENST00000378505 NUDT3O95989 172 aa9.38□□□□□ -0.91
RPGR-203ENST00000378505 LY6EQ16553 131 aa9.38□□□□□ -0.91
RPGR-203ENST00000378505 VOPP1Q96AW1 172 aa9.38□□□□□ -0.91
RPGR-203ENST00000378505 FMC1Q96HJ9 113 aa9.38□□□□□ -0.91
RPGR-203ENST00000378505 WNT10AQ9GZT5 417 aa9.38□□□□□ -0.91
RPGR-203ENST00000378505 RPP21Q9H633 154 aaKnown RBP9.38□□□□□ -0.91
RPGR-203ENST00000378505 GPX1P07203 203 aa9.38□□□□□ -0.91
RPGR-203ENST00000378505 COX6B1P14854 86 aa9.38□□□□□ -0.91
RPGR-203ENST00000378505 PPP1R27Q86WC6 154 aa9.38□□□□□ -0.91
RPGR-203ENST00000378505 RNASE6Q93091 150 aaKnown RBP9.38□□□□□ -0.91
RPGR-203ENST00000378505 OSTCQ9NRP0 149 aa9.38□□□□□ -0.91
RPGR-203ENST00000378505 IGHV3OR16-13A0A075B7E8 117 aa9.37□□□□□ -0.91
RPGR-203ENST00000378505 IGHV3-74A0A0B4J1X5 117 aa9.37□□□□□ -0.91
RPGR-203ENST00000378505 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.37□□□□□ -0.91
RPGR-203ENST00000378505 TMEM14EPQ6UXP3 125 aa9.37□□□□□ -0.91
RPGR-203ENST00000378505 OR1N2Q8NGR9 330 aa9.37□□□□□ -0.91
RPGR-203ENST00000378505 AUP1Q9Y679 476 aa9.37□□□□□ -0.91
RPGR-203ENST00000378505 IZUMO1RA6ND01 250 aa9.37□□□□□ -0.91
RPGR-203ENST00000378505 STAG3L2P0CL84 134 aa9.37□□□□□ -0.91
RPGR-203ENST00000378505 LYL1P12980 280 aa9.37□□□□□ -0.91
RPGR-203ENST00000378505 RPP25LQ8N5L8 163 aaKnown RBP9.37□□□□□ -0.91
RPGR-203ENST00000378505 ARPC1AQ92747 370 aa9.37□□□□□ -0.91
RPGR-203ENST00000378505 S4R3C0 116 aa9.37□□□□□ -0.91
RPGR-203ENST00000378505 NOTCH4Q99466 2003 aa9.37□□□□□ -0.91
RPGR-203ENST00000378505 ATXN7O15265 892 aaPredicted RBP9.37□□□□□ -0.91
RPGR-203ENST00000378505 GCSAMLQ5JQS6 135 aa9.37□□□□□ -0.91
RPGR-203ENST00000378505 Q6AWC8 147 aa9.37□□□□□ -0.91
RPGR-203ENST00000378505 TREML4Q6UXN2 200 aa9.37□□□□□ -0.91
RPGR-203ENST00000378505 CIARTQ8N365 385 aaPredicted RBP9.37□□□□□ -0.91
RPGR-203ENST00000378505 OCC1Q8TAD7 63 aa9.37□□□□□ -0.91
RPGR-203ENST00000378505 TMEM238LA0A1B0GVL6 79 aa9.37□□□□□ -0.91
RPGR-203ENST00000378505 GAGE10A6NGK3 116 aa9.37□□□□□ -0.91
RPGR-203ENST00000378505 A6NJY4 79 aa9.37□□□□□ -0.91
RPGR-203ENST00000378505 GLRX5Q86SX6 157 aa9.37□□□□□ -0.91
RPGR-203ENST00000378505 Q9H3A6 140 aa9.37□□□□□ -0.91
RPGR-203ENST00000378505 ZNF257Q9Y2Q1 563 aa9.37□□□□□ -0.91
RPGR-203ENST00000378505 ANAPC1Q9H1A4 1944 aa9.37□□□□□ -0.91
RPGR-203ENST00000378505 COL4A6Q14031 1691 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms