RNA–Protein interactions for RNA: ENST00000378105.4

PCDHGA1-201, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA1, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-201ENST00000378105 HIST1H1DP16402 221 aaKnown RBP9.06□□□□□ -0.96
PCDHGA1-201ENST00000378105 OR10P1Q8NGE3 313 aa9.06□□□□□ -0.96
PCDHGA1-201ENST00000378105 NMES1Q9C002 83 aa9.06□□□□□ -0.96
PCDHGA1-201ENST00000378105 SDF2L1Q9HCN8 221 aa9.06□□□□□ -0.96
PCDHGA1-201ENST00000378105 TP53TG3Q9ULZ0 132 aa9.06□□□□□ -0.96
PCDHGA1-201ENST00000378105 ANKHD1Q8IWZ3 2542 aaKnown RBP9.06□□□□□ -0.96
PCDHGA1-201ENST00000378105 A0A1B0GW64 132 aa9.05□□□□□ -0.96
PCDHGA1-201ENST00000378105 F2RL2O00254 374 aa9.05□□□□□ -0.96
PCDHGA1-201ENST00000378105 WISP1O95388 367 aa9.05□□□□□ -0.96
PCDHGA1-201ENST00000378105 OR10AG1Q8NH19 301 aa9.05□□□□□ -0.96
PCDHGA1-201ENST00000378105 BORCS7Q96B45 105 aa9.05□□□□□ -0.96
PCDHGA1-201ENST00000378105 ASCL2Q99929 193 aa9.05□□□□□ -0.96
PCDHGA1-201ENST00000378105 OR1A1Q9P1Q5 309 aa9.05□□□□□ -0.96
PCDHGA1-201ENST00000378105 NDUFB3O43676 98 aa9.05□□□□□ -0.96
PCDHGA1-201ENST00000378105 ZNF253O75346 499 aa9.05□□□□□ -0.96
PCDHGA1-201ENST00000378105 LYPD3O95274 346 aa9.05□□□□□ -0.96
PCDHGA1-201ENST00000378105 EGR1P18146 543 aa9.05□□□□□ -0.96
PCDHGA1-201ENST00000378105 BCL3P20749 454 aa9.05□□□□□ -0.96
PCDHGA1-201ENST00000378105 GATA4P43694 442 aa9.05□□□□□ -0.96
PCDHGA1-201ENST00000378105 LCN2P80188 198 aa9.05□□□□□ -0.96
PCDHGA1-201ENST00000378105 WFDC2Q14508 124 aa9.05□□□□□ -0.96
PCDHGA1-201ENST00000378105 TBR1Q16650 682 aa9.05□□□□□ -0.96
PCDHGA1-201ENST00000378105 FAM90A2PQ658T7 463 aa9.05□□□□□ -0.96
PCDHGA1-201ENST00000378105 ZNF355PQ9NSJ1 428 aa9.05□□□□□ -0.96
PCDHGA1-201ENST00000378105 FOXI3A8MTJ6 420 aaPredicted RBP9.05□□□□□ -0.96
PCDHGA1-201ENST00000378105 VSIG8P0DPA2 414 aa9.05□□□□□ -0.96
PCDHGA1-201ENST00000378105 HTR1DP28221 377 aa9.05□□□□□ -0.96
PCDHGA1-201ENST00000378105 ZNF585BQ52M93 769 aa9.05□□□□□ -0.96
PCDHGA1-201ENST00000378105 LSM4Q9Y4Z0 139 aaKnown RBP9.05□□□□□ -0.96
PCDHGA1-201ENST00000378105 ZFYVE26Q68DK2 2539 aa9.05□□□□□ -0.96
PCDHGA1-201ENST00000378105 TRBV6-7A0A0A0MS04 114 aa9.05□□□□□ -0.96
PCDHGA1-201ENST00000378105 LRP5LA4QPB2 252 aa9.05□□□□□ -0.96
PCDHGA1-201ENST00000378105 PDCD6O75340 191 aa9.05□□□□□ -0.96
PCDHGA1-201ENST00000378105 PTGDSP41222 190 aa9.05□□□□□ -0.96
PCDHGA1-201ENST00000378105 LINC00310P59036 64 aa9.05□□□□□ -0.96
PCDHGA1-201ENST00000378105 SLC35B1P78383 322 aa9.05□□□□□ -0.96
PCDHGA1-201ENST00000378105 FOXF2Q12947 444 aa9.05□□□□□ -0.96
PCDHGA1-201ENST00000378105 Q6ZT83 130 aa9.05□□□□□ -0.96
PCDHGA1-201ENST00000378105 ARPC1AQ92747 370 aa9.05□□□□□ -0.96
PCDHGA1-201ENST00000378105 PMCHL2Q9BQD1 86 aa9.05□□□□□ -0.96
PCDHGA1-201ENST00000378105 FRMD6-AS1P0C7T7 363 aa9.04□□□□□ -0.96
PCDHGA1-201ENST00000378105 COX7A1P24310 79 aa9.04□□□□□ -0.96
PCDHGA1-201ENST00000378105 ROM1Q03395 351 aa9.04□□□□□ -0.96
PCDHGA1-201ENST00000378105 FOXE3Q13461 319 aa9.04□□□□□ -0.96
PCDHGA1-201ENST00000378105 PDLIM3Q53GG5 364 aaPredicted RBP9.04□□□□□ -0.96
PCDHGA1-201ENST00000378105 HAPLN4Q86UW8 402 aa9.04□□□□□ -0.96
PCDHGA1-201ENST00000378105 FAM169BQ8N8A8 192 aa9.04□□□□□ -0.96
PCDHGA1-201ENST00000378105 CXXC4Q9H2H0 198 aa9.04□□□□□ -0.96
PCDHGA1-201ENST00000378105 CISD1Q9NZ45 108 aaKnown RBP9.04□□□□□ -0.96
PCDHGA1-201ENST00000378105 MGST1P10620 155 aaKnown RBP9.04□□□□□ -0.96
PCDHGA1-201ENST00000378105 ATP6V0CP27449 155 aa9.04□□□□□ -0.96
PCDHGA1-201ENST00000378105 RPS11P62280 158 aaKnown RBP eCLIP9.04□□□□□ -0.96
PCDHGA1-201ENST00000378105 ZDHHC22Q8N966 263 aa9.04□□□□□ -0.96
PCDHGA1-201ENST00000378105 ZIC4Q8N9L1 334 aa9.04□□□□□ -0.96
PCDHGA1-201ENST00000378105 OR1L8Q8NGR8 309 aa9.04□□□□□ -0.96
PCDHGA1-201ENST00000378105 HDHD3Q9BSH5 251 aaPredicted RBP9.04□□□□□ -0.96
PCDHGA1-201ENST00000378105 TRGV10A0A0A0MS01 117 aa9.04□□□□□ -0.96
PCDHGA1-201ENST00000378105 C1QTNF9BB2RNN3 333 aa9.04□□□□□ -0.96
PCDHGA1-201ENST00000378105 J3QR89 54 aa9.04□□□□□ -0.96
PCDHGA1-201ENST00000378105 C1QTNF9P0C862 333 aa9.04□□□□□ -0.96
PCDHGA1-201ENST00000378105 Q8N976 141 aa9.04□□□□□ -0.96
PCDHGA1-201ENST00000378105 LRRC75AQ8NAA5 344 aa9.04□□□□□ -0.96
PCDHGA1-201ENST00000378105 ZNF418Q8TF45 676 aaPredicted RBP9.04□□□□□ -0.96
PCDHGA1-201ENST00000378105 C2orf50Q96LR7 162 aa9.04□□□□□ -0.96
PCDHGA1-201ENST00000378105 SPAG8Q99932 426 aaPredicted RBP9.04□□□□□ -0.96
PCDHGA1-201ENST00000378105 MSRB2Q9Y3D2 182 aa9.04□□□□□ -0.96
PCDHGA1-201ENST00000378105 CST7O76096 145 aa9.03□□□□□ -0.96
PCDHGA1-201ENST00000378105 SFT2D2O95562 160 aa9.03□□□□□ -0.96
PCDHGA1-201ENST00000378105 SEC11BP0C7V7 166 aa9.03□□□□□ -0.96
PCDHGA1-201ENST00000378105 PLAC9Q5JTB6 97 aa9.03□□□□□ -0.96
PCDHGA1-201ENST00000378105 PTH2Q96A98 100 aa9.03□□□□□ -0.96
PCDHGA1-201ENST00000378105 PKIBQ9C010 78 aa9.03□□□□□ -0.96
PCDHGA1-201ENST00000378105 WT1P19544 449 aaPredicted RBP9.03□□□□□ -0.96
PCDHGA1-201ENST00000378105 PIP4P1Q86T03 277 aa9.03□□□□□ -0.96
PCDHGA1-201ENST00000378105 RCHY1Q96PM5 261 aa9.03□□□□□ -0.96
PCDHGA1-201ENST00000378105 CLEC7AQ9BXN2 247 aa9.03□□□□□ -0.96
PCDHGA1-201ENST00000378105 TMEM30CPA0ZSE6 113 aa9.03□□□□□ -0.96
PCDHGA1-201ENST00000378105 PRR30Q53SZ7 412 aaPredicted RBP9.03□□□□□ -0.96
PCDHGA1-201ENST00000378105 HEYLQ9NQ87 328 aaPredicted RBP9.03□□□□□ -0.96
PCDHGA1-201ENST00000378105 TECRQ9NZ01 308 aaKnown RBP9.03□□□□□ -0.96
PCDHGA1-201ENST00000378105 IGSF23A1L1A6 192 aa9.02□□□□□ -0.96
PCDHGA1-201ENST00000378105 SLC17A3O00476 420 aa9.02□□□□□ -0.96
PCDHGA1-201ENST00000378105 HSPB1P04792 205 aaKnown RBP9.02□□□□□ -0.96
PCDHGA1-201ENST00000378105 SIGLEC15Q6ZMC9 328 aa9.02□□□□□ -0.96
PCDHGA1-201ENST00000378105 H2BFWTQ7Z2G1 175 aa9.02□□□□□ -0.96
PCDHGA1-201ENST00000378105 Q8IYB0 196 aa9.02□□□□□ -0.96
PCDHGA1-201ENST00000378105 CLDND2Q8NHS1 167 aa9.02□□□□□ -0.96
PCDHGA1-201ENST00000378105 FAM57AQ8TBR7 257 aa9.02□□□□□ -0.96
PCDHGA1-201ENST00000378105 KLF14Q8TD94 323 aaPredicted RBP9.02□□□□□ -0.96
PCDHGA1-201ENST00000378105 ITLN1Q8WWA0 313 aa9.02□□□□□ -0.96
PCDHGA1-201ENST00000378105 MS4A5Q9H3V2 200 aa9.02□□□□□ -0.96
PCDHGA1-201ENST00000378105 FAM206AQ9NX38 181 aa9.02□□□□□ -0.96
PCDHGA1-201ENST00000378105 SYNGR1O43759 233 aa9.02□□□□□ -0.97
PCDHGA1-201ENST00000378105 HIST1H1EP10412 219 aaKnown RBP9.02□□□□□ -0.97
PCDHGA1-201ENST00000378105 SRSF4Q08170 494 aaKnown RBP9.02□□□□□ -0.97
PCDHGA1-201ENST00000378105 MOB1BQ7L9L4 216 aa9.02□□□□□ -0.97
PCDHGA1-201ENST00000378105 OR4A16Q8NH70 328 aa9.02□□□□□ -0.97
PCDHGA1-201ENST00000378105 CFHR4Q92496 578 aa9.02□□□□□ -0.97
PCDHGA1-201ENST00000378105 SFXN3Q9BWM7 321 aa9.02□□□□□ -0.97
PCDHGA1-201ENST00000378105 WDR61Q9GZS3 305 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms