RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 TBC1D26Q86UD7 250 aa17.03■□□□□ 0.32
C9orf47-202ENST00000375850 LYSMD2Q8IV50 215 aa17.03■□□□□ 0.32
C9orf47-202ENST00000375850 TMEM231Q9H6L2 316 aa17.03■□□□□ 0.32
C9orf47-202ENST00000375850 SCPEP1Q9HB40 452 aa17.03■□□□□ 0.32
C9orf47-202ENST00000375850 HLA-DMAP28067 261 aa17.02■□□□□ 0.32
C9orf47-202ENST00000375850 DUSP18Q8NEJ0 188 aa17.02■□□□□ 0.32
C9orf47-202ENST00000375850 GPX8Q8TED1 209 aa17.02■□□□□ 0.32
C9orf47-202ENST00000375850 VSIRQ9H7M9 311 aa17.02■□□□□ 0.32
C9orf47-202ENST00000375850 IGKV3-7A0A075B6H7 116 aa17.01■□□□□ 0.31
C9orf47-202ENST00000375850 IGHV3-49A0A0A0MS15 119 aa17.01■□□□□ 0.31
C9orf47-202ENST00000375850 RPS19P39019 145 aaKnown RBP17.01■□□□□ 0.31
C9orf47-202ENST00000375850 TMEM187Q14656 261 aa17.01■□□□□ 0.31
C9orf47-202ENST00000375850 ZNF124Q15973 351 aa17.01■□□□□ 0.31
C9orf47-202ENST00000375850 PINX1Q96BK5 328 aaKnown RBP17.01■□□□□ 0.31
C9orf47-202ENST00000375850 SMIM31A0A1B0GVY4 71 aa17■□□□□ 0.31
C9orf47-202ENST00000375850 INS-IGF2F8WCM5 200 aa17■□□□□ 0.31
C9orf47-202ENST00000375850 DNASE2O00115 360 aaPredicted RBP17■□□□□ 0.31
C9orf47-202ENST00000375850 CORTO00230 105 aa17■□□□□ 0.31
C9orf47-202ENST00000375850 ST8SIA3O43173 380 aa17■□□□□ 0.31
C9orf47-202ENST00000375850 CA1P00915 261 aaPredicted RBP17■□□□□ 0.31
C9orf47-202ENST00000375850 TMEM41BQ5BJD5 291 aa17■□□□□ 0.31
C9orf47-202ENST00000375850 TOMM20LQ6UXN7 152 aa17■□□□□ 0.31
C9orf47-202ENST00000375850 ZNF600Q6ZNG1 722 aa17■□□□□ 0.31
C9orf47-202ENST00000375850 GBGT1Q8N5D6 347 aa17■□□□□ 0.31
C9orf47-202ENST00000375850 C2CD4CQ8TF44 421 aa17■□□□□ 0.31
C9orf47-202ENST00000375850 DEDDO75618 318 aa16.99■□□□□ 0.31
C9orf47-202ENST00000375850 ATG12O94817 140 aa16.99■□□□□ 0.31
C9orf47-202ENST00000375850 RCVRNP35243 200 aa16.99■□□□□ 0.31
C9orf47-202ENST00000375850 SNCAP37840 140 aa16.99■□□□□ 0.31
C9orf47-202ENST00000375850 NANOS2P60321 138 aaKnown RBP16.99■□□□□ 0.31
C9orf47-202ENST00000375850 MRGPRFQ96AM1 343 aa16.99■□□□□ 0.31
C9orf47-202ENST00000375850 MS4A6AQ9H2W1 248 aa16.99■□□□□ 0.31
C9orf47-202ENST00000375850 VCX3AQ9NNX9 186 aa16.99■□□□□ 0.31
C9orf47-202ENST00000375850 FBXL17Q9UF56 701 aa16.99■□□□□ 0.31
C9orf47-202ENST00000375850 A0A1W2PS18 150 aa16.98■□□□□ 0.31
C9orf47-202ENST00000375850 C11orf94C9JXX5 98 aa16.98■□□□□ 0.31
C9orf47-202ENST00000375850 SCGB2A1O75556 95 aa16.98■□□□□ 0.31
C9orf47-202ENST00000375850 IGKV1-39P01597 117 aa16.98■□□□□ 0.31
C9orf47-202ENST00000375850 APOA1P02647 267 aa16.98■□□□□ 0.31
C9orf47-202ENST00000375850 IGKV1D-39P04432 117 aa16.98■□□□□ 0.31
C9orf47-202ENST00000375850 SUB1P53999 127 aaKnown RBP eCLIP16.98■□□□□ 0.31
C9orf47-202ENST00000375850 ST8SIA2Q92186 375 aa16.98■□□□□ 0.31
C9orf47-202ENST00000375850 ZNF486Q96H40 463 aaPredicted RBP16.98■□□□□ 0.31
C9orf47-202ENST00000375850 HRH4Q9H3N8 390 aa16.98■□□□□ 0.31
C9orf47-202ENST00000375850 IGHV3OR16-13A0A075B7E8 117 aa16.97■□□□□ 0.31
C9orf47-202ENST00000375850 IGHV3-74A0A0B4J1X5 117 aa16.97■□□□□ 0.31
C9orf47-202ENST00000375850 IGHV3-48P01763 117 aa16.96■□□□□ 0.31
C9orf47-202ENST00000375850 DEFB131AP59861 70 aa16.96■□□□□ 0.31
C9orf47-202ENST00000375850 RND3P61587 244 aa16.96■□□□□ 0.31
C9orf47-202ENST00000375850 RPL11P62913 178 aaKnown RBP16.96■□□□□ 0.31
C9orf47-202ENST00000375850 STHQ8IWL8 128 aa16.96■□□□□ 0.31
C9orf47-202ENST00000375850 SLC35G3Q8N808 338 aa16.96■□□□□ 0.31
C9orf47-202ENST00000375850 ZFAND3Q9H8U3 227 aa16.96■□□□□ 0.31
C9orf47-202ENST00000375850 PUS1Q9Y606 427 aaKnown RBP eCLIP16.96■□□□□ 0.31
C9orf47-202ENST00000375850 KMT2AQ03164 3969 aa16.96■□□□□ 0.3
C9orf47-202ENST00000375850 NPPCP23582 126 aa16.95■□□□□ 0.3
C9orf47-202ENST00000375850 TGFBR1P36897 503 aa16.95■□□□□ 0.3
C9orf47-202ENST00000375850 PVRIGQ6DKI7 326 aa16.95■□□□□ 0.3
C9orf47-202ENST00000375850 PDCD10Q9BUL8 212 aa16.95■□□□□ 0.3
C9orf47-202ENST00000375850 TMEM50AO95807 157 aa16.94■□□□□ 0.3
C9orf47-202ENST00000375850 MORN3Q6PF18 240 aaPredicted RBP16.94■□□□□ 0.3
C9orf47-202ENST00000375850 YIPF6Q96EC8 236 aa16.94■□□□□ 0.3
C9orf47-202ENST00000375850 GRAMD2BQ96HH9 432 aa16.94■□□□□ 0.3
C9orf47-202ENST00000375850 NARS2Q96I59 477 aaKnown RBP16.94■□□□□ 0.3
C9orf47-202ENST00000375850 FRAS1Q86XX4 4008 aa16.94■□□□□ 0.3
C9orf47-202ENST00000375850 SPP1P10451 314 aa16.93■□□□□ 0.3
C9orf47-202ENST00000375850 AKR1C2P52895 323 aa16.93■□□□□ 0.3
C9orf47-202ENST00000375850 CENPSQ8N2Z9 138 aa16.93■□□□□ 0.3
C9orf47-202ENST00000375850 METTL26Q96S19 204 aa16.93■□□□□ 0.3
C9orf47-202ENST00000375850 COMMD3Q9UBI1 195 aa16.93■□□□□ 0.3
C9orf47-202ENST00000375850 RABAC1Q9UI14 185 aa16.93■□□□□ 0.3
C9orf47-202ENST00000375850 IFNA17P01571 189 aa16.92■□□□□ 0.3
C9orf47-202ENST00000375850 APOHP02749 345 aaPredicted RBP16.92■□□□□ 0.3
C9orf47-202ENST00000375850 MIFP14174 115 aa16.92■□□□□ 0.3
C9orf47-202ENST00000375850 LEMD1Q68G75 181 aa16.92■□□□□ 0.3
C9orf47-202ENST00000375850 SNX29P2Q8IUI4 249 aa16.92■□□□□ 0.3
C9orf47-202ENST00000375850 ARRDC1Q8N5I2 433 aa16.92■□□□□ 0.3
C9orf47-202ENST00000375850 A0A087WXM4 84 aa16.91■□□□□ 0.3
C9orf47-202ENST00000375850 CLN5O75503 358 aa16.91■□□□□ 0.3
C9orf47-202ENST00000375850 PGAM2P15259 253 aa16.91■□□□□ 0.3
C9orf47-202ENST00000375850 RPL5P46777 297 aaKnown RBP16.91■□□□□ 0.3
C9orf47-202ENST00000375850 EIF2B2P49770 351 aaKnown RBP16.91■□□□□ 0.3
C9orf47-202ENST00000375850 LSM3P62310 102 aaKnown RBP16.91■□□□□ 0.3
C9orf47-202ENST00000375850 LILRB2Q8N423 598 aa16.91■□□□□ 0.3
C9orf47-202ENST00000375850 Q8NAQ8 132 aa16.91■□□□□ 0.3
C9orf47-202ENST00000375850 ENY2Q9NPA8 101 aa16.91■□□□□ 0.3
C9orf47-202ENST00000375850 TRAV30A0A087WSZ9 112 aa16.9■□□□□ 0.3
C9orf47-202ENST00000375850 A0A0B4J293 547 aa16.9■□□□□ 0.3
C9orf47-202ENST00000375850 A0A1B0GU03 582 aa16.9■□□□□ 0.3
C9orf47-202ENST00000375850 B3GALNT1O75752 331 aa16.9■□□□□ 0.3
C9orf47-202ENST00000375850 P0C879 139 aa16.9■□□□□ 0.3
C9orf47-202ENST00000375850 TBPP20226 339 aa16.9■□□□□ 0.3
C9orf47-202ENST00000375850 CRYBB3P26998 211 aa16.9■□□□□ 0.3
C9orf47-202ENST00000375850 TRPT1Q86TN4 253 aaKnown RBP16.9■□□□□ 0.3
C9orf47-202ENST00000375850 OR4X1Q8NH49 305 aa16.9■□□□□ 0.3
C9orf47-202ENST00000375850 IGHV3-66A0A0C4DH42 116 aa16.89■□□□□ 0.29
C9orf47-202ENST00000375850 K7EQG2 157 aa16.89■□□□□ 0.29
C9orf47-202ENST00000375850 DEFB4AO15263 64 aa16.89■□□□□ 0.29
C9orf47-202ENST00000375850 IGKV1-5P01602 117 aa16.89■□□□□ 0.29
C9orf47-202ENST00000375850 RNASE2P10153 161 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms