RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 Q8TCH9 128 aa13.81□□□□□ -0.2
PHF1-202ENST00000374516 SSMEM1Q8WWF3 244 aa13.81□□□□□ -0.2
PHF1-202ENST00000374516 CCL17Q92583 94 aa13.81□□□□□ -0.2
PHF1-202ENST00000374516 EAF1Q96JC9 268 aaPredicted RBP13.81□□□□□ -0.2
PHF1-202ENST00000374516 GNB1LQ9BYB4 327 aa13.81□□□□□ -0.2
PHF1-202ENST00000374516 SAP30LQ9HAJ7 183 aa13.81□□□□□ -0.2
PHF1-202ENST00000374516 FBXL7Q9UJT9 491 aa13.81□□□□□ -0.2
PHF1-202ENST00000374516 FAM90A9PA6NNJ1 464 aa13.81□□□□□ -0.2
PHF1-202ENST00000374516 E7EQL1 145 aa13.81□□□□□ -0.2
PHF1-202ENST00000374516 FOXH1O75593 365 aa13.81□□□□□ -0.2
PHF1-202ENST00000374516 DUTP33316 252 aaKnown RBP13.81□□□□□ -0.2
PHF1-202ENST00000374516 OR5I1Q13606 314 aa13.81□□□□□ -0.2
PHF1-202ENST00000374516 EFNB3Q15768 340 aa13.81□□□□□ -0.2
PHF1-202ENST00000374516 RPL39P5Q59GN2 51 aa13.81□□□□□ -0.2
PHF1-202ENST00000374516 PRAMEF5Q5TYX0 476 aa13.81□□□□□ -0.2
PHF1-202ENST00000374516 C11orf52Q96A22 123 aa13.81□□□□□ -0.2
PHF1-202ENST00000374516 FAM103A1Q9BTL3 118 aaKnown RBP13.81□□□□□ -0.2
PHF1-202ENST00000374516 NPVFQ9HCQ7 196 aa13.81□□□□□ -0.2
PHF1-202ENST00000374516 JPT1Q9UK76 154 aa13.81□□□□□ -0.2
PHF1-202ENST00000374516 LSM4Q9Y4Z0 139 aaKnown RBP13.81□□□□□ -0.2
PHF1-202ENST00000374516 RNF114Q9Y508 228 aa13.81□□□□□ -0.2
PHF1-202ENST00000374516 RAI1Q7Z5J4 1906 aaPredicted RBP13.81□□□□□ -0.2
PHF1-202ENST00000374516 CA7P43166 264 aa13.8□□□□□ -0.2
PHF1-202ENST00000374516 SPATA31B1PQ5VZV4 182 aa13.8□□□□□ -0.2
PHF1-202ENST00000374516 ZNF788Q6ZQV5 615 aa13.8□□□□□ -0.2
PHF1-202ENST00000374516 ST6GALNAC3Q8NDV1 305 aa13.8□□□□□ -0.2
PHF1-202ENST00000374516 OR52E5Q8NH55 327 aa13.8□□□□□ -0.2
PHF1-202ENST00000374516 GNB4Q9HAV0 340 aa13.8□□□□□ -0.2
PHF1-202ENST00000374516 NGBQ9NPG2 151 aa13.8□□□□□ -0.2
PHF1-202ENST00000374516 CBY1Q9Y3M2 126 aa13.8□□□□□ -0.2
PHF1-202ENST00000374516 V9GYV3 84 aa13.8□□□□□ -0.2
PHF1-202ENST00000374516 ABCA4P78363 2273 aa13.8□□□□□ -0.2
PHF1-202ENST00000374516 TRBV9A0A0B4J1U6 114 aa13.8□□□□□ -0.2
PHF1-202ENST00000374516 CGB3P0DN86 165 aa13.8□□□□□ -0.2
PHF1-202ENST00000374516 CGB7P0DN87 165 aa13.8□□□□□ -0.2
PHF1-202ENST00000374516 COL8A2P25067 703 aa13.8□□□□□ -0.2
PHF1-202ENST00000374516 KRTDAPP60985 99 aa13.8□□□□□ -0.2
PHF1-202ENST00000374516 COL5A1-AS1Q5SY13 56 aa13.8□□□□□ -0.2
PHF1-202ENST00000374516 DCHS2Q6V1P9 2916 aa13.8□□□□□ -0.2
PHF1-202ENST00000374516 VKORC1L1Q8N0U8 176 aa13.8□□□□□ -0.2
PHF1-202ENST00000374516 OR8I2Q8N0Y5 310 aa13.8□□□□□ -0.2
PHF1-202ENST00000374516 Q8N976 141 aa13.8□□□□□ -0.2
PHF1-202ENST00000374516 F2RL2O00254 374 aa13.79□□□□□ -0.2
PHF1-202ENST00000374516 PLAUP00749 431 aa13.79□□□□□ -0.2
PHF1-202ENST00000374516 RHOBP62745 196 aa13.79□□□□□ -0.2
PHF1-202ENST00000374516 CDSNQ15517 529 aa13.79□□□□□ -0.2
PHF1-202ENST00000374516 OR4B1Q8NGF8 309 aa13.79□□□□□ -0.2
PHF1-202ENST00000374516 UHRF2Q96PU4 802 aa13.79□□□□□ -0.2
PHF1-202ENST00000374516 RNF2Q99496 336 aa13.79□□□□□ -0.2
PHF1-202ENST00000374516 KBTBD11-OT1A0A1B0GTJ5 212 aa13.79□□□□□ -0.2
PHF1-202ENST00000374516 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.79□□□□□ -0.2
PHF1-202ENST00000374516 DIRC3C9JPN6 131 aa13.79□□□□□ -0.2
PHF1-202ENST00000374516 MT-CO2P00403 227 aa13.79□□□□□ -0.2
PHF1-202ENST00000374516 TFPI2P48307 235 aa13.79□□□□□ -0.2
PHF1-202ENST00000374516 DMRTA1Q5VZB9 504 aa13.79□□□□□ -0.2
PHF1-202ENST00000374516 TEX36Q5VZQ5 186 aa13.79□□□□□ -0.2
PHF1-202ENST00000374516 C1orf229Q6ZS94 237 aaPredicted RBP13.79□□□□□ -0.2
PHF1-202ENST00000374516 RNASE6Q93091 150 aaKnown RBP13.79□□□□□ -0.2
PHF1-202ENST00000374516 ZNF586Q9NXT0 402 aa13.79□□□□□ -0.2
PHF1-202ENST00000374516 TRAV3A0A0B4J244 114 aa13.78□□□□□ -0.2
PHF1-202ENST00000374516 M0R1X1 148 aa13.78□□□□□ -0.2
PHF1-202ENST00000374516 IFI27L2Q9H2X8 130 aa13.78□□□□□ -0.2
PHF1-202ENST00000374516 NAT8BQ9UHF3 227 aa13.78□□□□□ -0.2
PHF1-202ENST00000374516 VSTM5A8MXK1 200 aa13.78□□□□□ -0.2
PHF1-202ENST00000374516 MMP23AO75900 390 aa13.78□□□□□ -0.2
PHF1-202ENST00000374516 CTRLP40313 264 aa13.78□□□□□ -0.2
PHF1-202ENST00000374516 RELBQ01201 579 aa13.78□□□□□ -0.2
PHF1-202ENST00000374516 SSX8Q7RTT4 187 aa13.78□□□□□ -0.2
PHF1-202ENST00000374516 STPG3Q8N7X2 389 aa13.78□□□□□ -0.2
PHF1-202ENST00000374516 OR4P4Q8NGL7 312 aa13.78□□□□□ -0.2
PHF1-202ENST00000374516 DYNLRB1Q9NP97 96 aa13.78□□□□□ -0.2
PHF1-202ENST00000374516 NRN1Q9NPD7 142 aa13.78□□□□□ -0.2
PHF1-202ENST00000374516 ZFP30Q9Y2G7 519 aa13.78□□□□□ -0.2
PHF1-202ENST00000374516 TBL2Q9Y4P3 447 aaKnown RBP13.78□□□□□ -0.2
PHF1-202ENST00000374516 YLPM1P49750 1951 aaKnown RBP13.78□□□□□ -0.2
PHF1-202ENST00000374516 CX3CL1P78423 397 aa13.77□□□□□ -0.21
PHF1-202ENST00000374516 LY6DQ14210 128 aa13.77□□□□□ -0.21
PHF1-202ENST00000374516 MMDQ15546 238 aa13.77□□□□□ -0.21
PHF1-202ENST00000374516 CT45A1Q5HYN5 189 aa13.77□□□□□ -0.21
PHF1-202ENST00000374516 TEPPQ6URK8 271 aa13.77□□□□□ -0.21
PHF1-202ENST00000374516 CT45A3Q8NHU0 189 aa13.77□□□□□ -0.21
PHF1-202ENST00000374516 DSCAML1Q8TD84 2053 aa13.77□□□□□ -0.21
PHF1-202ENST00000374516 HELTA6NFD8 242 aa13.76□□□□□ -0.21
PHF1-202ENST00000374516 SPINK4O60575 86 aa13.76□□□□□ -0.21
PHF1-202ENST00000374516 AREGP15514 252 aa13.76□□□□□ -0.21
PHF1-202ENST00000374516 RAB7AP51149 207 aa13.76□□□□□ -0.21
PHF1-202ENST00000374516 SUMO1P63165 101 aaKnown RBP13.76□□□□□ -0.21
PHF1-202ENST00000374516 OR10J3Q5JRS4 329 aa13.76□□□□□ -0.21
PHF1-202ENST00000374516 SLC45A2Q9UMX9 530 aa13.76□□□□□ -0.21
PHF1-202ENST00000374516 TACC2O95359 2948 aa13.76□□□□□ -0.21
PHF1-202ENST00000374516 A0A1W2PS18 150 aa13.76□□□□□ -0.21
PHF1-202ENST00000374516 TMEM178BH3BS89 294 aa13.76□□□□□ -0.21
PHF1-202ENST00000374516 CD3EP07766 207 aa13.76□□□□□ -0.21
PHF1-202ENST00000374516 CHRNB4P30926 498 aa13.76□□□□□ -0.21
PHF1-202ENST00000374516 GNG10P50151 68 aa13.76□□□□□ -0.21
PHF1-202ENST00000374516 ERVK-16P61578 105 aa13.76□□□□□ -0.21
PHF1-202ENST00000374516 KIAA1644Q3SXP7 199 aa13.76□□□□□ -0.21
PHF1-202ENST00000374516 SLC35E1Q96K37 410 aa13.76□□□□□ -0.21
PHF1-202ENST00000374516 SAA2-SAA4A0A096LPE2 208 aa13.75□□□□□ -0.21
PHF1-202ENST00000374516 SIAH2O43255 324 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms