RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 LRTM2Q8N967 370 aa20.01■□□□□ 0.79
RAPGEF1-203ENST00000372195 FER1L6-AS1Q8NA97 138 aa20.01■□□□□ 0.79
RAPGEF1-203ENST00000372195 TM4SF5O14894 197 aa20.01■□□□□ 0.79
RAPGEF1-203ENST00000372195 BRWD3Q6RI45 1802 aa20.01■□□□□ 0.79
RAPGEF1-203ENST00000372195 KNTC1P50748 2209 aa20.01■□□□□ 0.79
RAPGEF1-203ENST00000372195 OR9G9P0C7N8 305 aa20.01■□□□□ 0.79
RAPGEF1-203ENST00000372195 EVI2AP22794 236 aa20.01■□□□□ 0.79
RAPGEF1-203ENST00000372195 NRN1Q9NPD7 142 aa20.01■□□□□ 0.79
RAPGEF1-203ENST00000372195 RP1P56715 2156 aa20.01■□□□□ 0.79
RAPGEF1-203ENST00000372195 DNAL4O96015 105 aa20.01■□□□□ 0.79
RAPGEF1-203ENST00000372195 SEMA5BQ9P283 1151 aa20.01■□□□□ 0.79
RAPGEF1-203ENST00000372195 DOCK3Q8IZD9 2030 aa20■□□□□ 0.79
RAPGEF1-203ENST00000372195 TAF1LQ8IZX4 1826 aa20■□□□□ 0.79
RAPGEF1-203ENST00000372195 A0A087WWC5 75 aa20■□□□□ 0.79
RAPGEF1-203ENST00000372195 RAB9AP51151 201 aa20■□□□□ 0.79
RAPGEF1-203ENST00000372195 TMEM95Q3KNT9 176 aa20■□□□□ 0.79
RAPGEF1-203ENST00000372195 TMEM30BQ3MIR4 351 aa20■□□□□ 0.79
RAPGEF1-203ENST00000372195 JKAMPQ9P055 326 aa20■□□□□ 0.79
RAPGEF1-203ENST00000372195 TRBV6-7A0A0A0MS04 114 aa20■□□□□ 0.79
RAPGEF1-203ENST00000372195 SRD5A1P18405 259 aa20■□□□□ 0.79
RAPGEF1-203ENST00000372195 RIPPLY3P57055 190 aa20■□□□□ 0.79
RAPGEF1-203ENST00000372195 ZNF324BQ6AW86 544 aaPredicted RBP19.99■□□□□ 0.79
RAPGEF1-203ENST00000372195 PAQR4Q8N4S7 273 aaPredicted RBP19.99■□□□□ 0.79
RAPGEF1-203ENST00000372195 C5orf24Q7Z6I8 188 aa19.99■□□□□ 0.79
RAPGEF1-203ENST00000372195 TTC9CQ8N5M4 171 aa19.99■□□□□ 0.79
RAPGEF1-203ENST00000372195 DERL1Q9BUN8 251 aa19.99■□□□□ 0.79
RAPGEF1-203ENST00000372195 FAM169BQ8N8A8 192 aa19.99■□□□□ 0.79
RAPGEF1-203ENST00000372195 IMMP1LQ96LU5 166 aa19.99■□□□□ 0.79
RAPGEF1-203ENST00000372195 LINC01587Q99440 93 aa19.99■□□□□ 0.79
RAPGEF1-203ENST00000372195 TMEM101Q96IK0 257 aa19.98■□□□□ 0.79
RAPGEF1-203ENST00000372195 LINC00614P0C842 121 aa19.98■□□□□ 0.79
RAPGEF1-203ENST00000372195 HTN3P15516 51 aa19.98■□□□□ 0.79
RAPGEF1-203ENST00000372195 ZNF497Q6ZNH5 498 aa19.98■□□□□ 0.79
RAPGEF1-203ENST00000372195 ZNF436-AS1Q8NC38 126 aaPredicted RBP19.98■□□□□ 0.79
RAPGEF1-203ENST00000372195 IGHV4-39P01824 125 aa19.98■□□□□ 0.79
RAPGEF1-203ENST00000372195 RFNGQ9Y644 331 aa19.98■□□□□ 0.79
RAPGEF1-203ENST00000372195 TRAV5A0A0B4J249 113 aa19.97■□□□□ 0.79
RAPGEF1-203ENST00000372195 RTN4RL2Q86UN3 420 aa19.97■□□□□ 0.79
RAPGEF1-203ENST00000372195 FLVCR1-AS1Q8TAF5 88 aa19.97■□□□□ 0.79
RAPGEF1-203ENST00000372195 MORN2Q502X0 79 aa19.97■□□□□ 0.79
RAPGEF1-203ENST00000372195 J3QRE1 110 aa19.97■□□□□ 0.79
RAPGEF1-203ENST00000372195 MEF2CQ06413 473 aaPredicted RBP19.97■□□□□ 0.79
RAPGEF1-203ENST00000372195 OR10W1Q8NGF6 305 aa19.97■□□□□ 0.79
RAPGEF1-203ENST00000372195 UPK2O00526 184 aa19.97■□□□□ 0.79
RAPGEF1-203ENST00000372195 SPRR3Q9UBC9 169 aa19.97■□□□□ 0.79
RAPGEF1-203ENST00000372195 FBLN7Q53RD9 439 aa19.96■□□□□ 0.79
RAPGEF1-203ENST00000372195 FAM57AQ8TBR7 257 aa19.96■□□□□ 0.79
RAPGEF1-203ENST00000372195 RNASEH2CQ8TDP1 164 aaKnown RBP19.96■□□□□ 0.79
RAPGEF1-203ENST00000372195 J3QW42 95 aa19.96■□□□□ 0.79
RAPGEF1-203ENST00000372195 TRAV12-3A0A0B4J271 114 aa19.96■□□□□ 0.79
RAPGEF1-203ENST00000372195 OR5AN1Q8NGI8 311 aa19.96■□□□□ 0.79
RAPGEF1-203ENST00000372195 C17orf100A8MU93 164 aa19.96■□□□□ 0.79
RAPGEF1-203ENST00000372195 TMEM170AQ8WVE7 144 aa19.96■□□□□ 0.79
RAPGEF1-203ENST00000372195 CLDN16Q9Y5I7 305 aa19.96■□□□□ 0.79
RAPGEF1-203ENST00000372195 RP1L1Q8IWN7 2480 aaPredicted RBP19.95■□□□□ 0.78
RAPGEF1-203ENST00000372195 MRPL14Q6P1L8 145 aaKnown RBP19.95■□□□□ 0.78
RAPGEF1-203ENST00000372195 GDF15Q99988 308 aa19.95■□□□□ 0.78
RAPGEF1-203ENST00000372195 LAMTOR2Q9Y2Q5 125 aa19.95■□□□□ 0.78
RAPGEF1-203ENST00000372195 SIPA1L1O43166 1804 aa19.95■□□□□ 0.78
RAPGEF1-203ENST00000372195 LINC00312Q9Y6C7 94 aa19.95■□□□□ 0.78
RAPGEF1-203ENST00000372195 CACNG7P62955 275 aa19.95■□□□□ 0.78
RAPGEF1-203ENST00000372195 COLCA1Q6ZS62 124 aa19.95■□□□□ 0.78
RAPGEF1-203ENST00000372195 C7orf69Q9H7B7 122 aa19.95■□□□□ 0.78
RAPGEF1-203ENST00000372195 HIST1H2BKO60814 126 aa19.94■□□□□ 0.78
RAPGEF1-203ENST00000372195 TMEM50AO95807 157 aa19.94■□□□□ 0.78
RAPGEF1-203ENST00000372195 HIST1H2BJP06899 126 aa19.94■□□□□ 0.78
RAPGEF1-203ENST00000372195 HIST1H2BOP23527 126 aa19.94■□□□□ 0.78
RAPGEF1-203ENST00000372195 HIST1H2BBP33778 126 aa19.94■□□□□ 0.78
RAPGEF1-203ENST00000372195 HIST1H2BDP58876 126 aa19.94■□□□□ 0.78
RAPGEF1-203ENST00000372195 HIST1H2BCP62807 126 aa19.94■□□□□ 0.78
RAPGEF1-203ENST00000372195 HIST2H2BEQ16778 126 aa19.94■□□□□ 0.78
RAPGEF1-203ENST00000372195 HIST2H2BFQ5QNW6 126 aaPredicted RBP19.94■□□□□ 0.78
RAPGEF1-203ENST00000372195 HIST1H2BHQ93079 126 aa19.94■□□□□ 0.78
RAPGEF1-203ENST00000372195 HIST1H2BNQ99877 126 aa19.94■□□□□ 0.78
RAPGEF1-203ENST00000372195 HIST1H2BMQ99879 126 aa19.94■□□□□ 0.78
RAPGEF1-203ENST00000372195 MEGF9Q9H1U4 602 aa19.94■□□□□ 0.78
RAPGEF1-203ENST00000372195 C15orf61A6NNL5 157 aa19.94■□□□□ 0.78
RAPGEF1-203ENST00000372195 LTBRP36941 435 aa19.94■□□□□ 0.78
RAPGEF1-203ENST00000372195 TUBA4BQ9H853 241 aa19.94■□□□□ 0.78
RAPGEF1-203ENST00000372195 GZMBP10144 247 aa19.94■□□□□ 0.78
RAPGEF1-203ENST00000372195 ORMDL3Q8N138 153 aa19.94■□□□□ 0.78
RAPGEF1-203ENST00000372195 COPS9Q8WXC6 57 aa19.94■□□□□ 0.78
RAPGEF1-203ENST00000372195 GREB1Q4ZG55 1949 aa19.94■□□□□ 0.78
RAPGEF1-203ENST00000372195 LINC00527Q9UJ94 153 aa19.94■□□□□ 0.78
RAPGEF1-203ENST00000372195 FAM168AQ92567 244 aa19.93■□□□□ 0.78
RAPGEF1-203ENST00000372195 C2orf88Q9BSF0 95 aa19.93■□□□□ 0.78
RAPGEF1-203ENST00000372195 FOXG1P55316 489 aaPredicted RBP19.93■□□□□ 0.78
RAPGEF1-203ENST00000372195 OR10J3Q5JRS4 329 aa19.93■□□□□ 0.78
RAPGEF1-203ENST00000372195 LINC00469Q8N7U9 141 aa19.93■□□□□ 0.78
RAPGEF1-203ENST00000372195 NAPSAO96009 420 aa19.93■□□□□ 0.78
RAPGEF1-203ENST00000372195 OCC1Q8TAD7 63 aa19.93■□□□□ 0.78
RAPGEF1-203ENST00000372195 DOCK4Q8N1I0 1966 aa19.93■□□□□ 0.78
RAPGEF1-203ENST00000372195 CD7P09564 240 aa19.93■□□□□ 0.78
RAPGEF1-203ENST00000372195 CXCL1P09341 107 aa19.92■□□□□ 0.78
RAPGEF1-203ENST00000372195 NHP2Q9NX24 153 aaKnown RBP19.92■□□□□ 0.78
RAPGEF1-203ENST00000372195 IGHV3-64A0A075B6Q5 118 aa19.92■□□□□ 0.78
RAPGEF1-203ENST00000372195 OTORQ9NRC9 128 aa19.92■□□□□ 0.78
RAPGEF1-203ENST00000372195 A0A1B0GV72 72 aa19.92■□□□□ 0.78
RAPGEF1-203ENST00000372195 IGHV1-18A0A0C4DH31 117 aa19.92■□□□□ 0.78
RAPGEF1-203ENST00000372195 ATP5IP56385 69 aaPredicted RBP19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms