RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 K7EMI3 77 aa9.85□□□□□ -0.83
PTPN1-201ENST00000371621 TOMM40O96008 361 aa9.85□□□□□ -0.83
PTPN1-201ENST00000371621 IL4P05112 153 aa9.85□□□□□ -0.83
PTPN1-201ENST00000371621 FKBP2P26885 142 aaKnown RBP9.85□□□□□ -0.83
PTPN1-201ENST00000371621 MNX1P50219 401 aaPredicted RBP9.85□□□□□ -0.83
PTPN1-201ENST00000371621 NCOA6Q14686 2063 aaPredicted RBP9.85□□□□□ -0.83
PTPN1-201ENST00000371621 BOD1L2Q8IYS8 172 aa9.85□□□□□ -0.83
PTPN1-201ENST00000371621 RNF115Q9Y4L5 304 aa9.85□□□□□ -0.83
PTPN1-201ENST00000371621 TRIOBPQ9H2D6 2365 aa9.85□□□□□ -0.83
PTPN1-201ENST00000371621 TRAV8-2A0A0B4J237 113 aa9.85□□□□□ -0.83
PTPN1-201ENST00000371621 PRTN3P24158 256 aa9.85□□□□□ -0.83
PTPN1-201ENST00000371621 LYZP61626 148 aa9.85□□□□□ -0.83
PTPN1-201ENST00000371621 OSTCQ9NRP0 149 aa9.85□□□□□ -0.83
PTPN1-201ENST00000371621 UFC1Q9Y3C8 167 aa9.85□□□□□ -0.83
PTPN1-201ENST00000371621 STAG3L2P0CL84 134 aa9.85□□□□□ -0.83
PTPN1-201ENST00000371621 SUB1P53999 127 aaKnown RBP eCLIP9.85□□□□□ -0.839e-7■■■□□ 17.7
PTPN1-201ENST00000371621 C1QTNF5Q9BXJ0 243 aa9.85□□□□□ -0.83
PTPN1-201ENST00000371621 TCF19Q9Y242 345 aa9.85□□□□□ -0.83
PTPN1-201ENST00000371621 C9orf118A6NHY6 69 aa9.85□□□□□ -0.83
PTPN1-201ENST00000371621 TNFSF15O95150 251 aa9.85□□□□□ -0.83
PTPN1-201ENST00000371621 RBP4P02753 201 aa9.85□□□□□ -0.83
PTPN1-201ENST00000371621 CFPP27918 469 aa9.85□□□□□ -0.83
PTPN1-201ENST00000371621 RPL13AP40429 203 aaKnown RBP9.85□□□□□ -0.83
PTPN1-201ENST00000371621 ATP5G2Q06055 141 aa9.85□□□□□ -0.83
PTPN1-201ENST00000371621 CFAP161Q6P656 301 aa9.85□□□□□ -0.83
PTPN1-201ENST00000371621 LINC00173Q6ZV60 143 aa9.85□□□□□ -0.83
PTPN1-201ENST00000371621 TEX45Q8NA69 505 aa9.85□□□□□ -0.83
PTPN1-201ENST00000371621 PLA2G2FQ9BZM2 168 aa9.85□□□□□ -0.83
PTPN1-201ENST00000371621 TRAV5A0A0B4J249 113 aa9.84□□□□□ -0.83
PTPN1-201ENST00000371621 MMP23AO75900 390 aa9.84□□□□□ -0.83
PTPN1-201ENST00000371621 CELA3BP08861 270 aa9.84□□□□□ -0.83
PTPN1-201ENST00000371621 PYYP10082 97 aa9.84□□□□□ -0.83
PTPN1-201ENST00000371621 MBNL2Q5VZF2 373 aaKnown RBP9.84□□□□□ -0.83
PTPN1-201ENST00000371621 SNRNP40Q96DI7 357 aaKnown RBP9.84□□□□□ -0.83
PTPN1-201ENST00000371621 RABAC1Q9UI14 185 aa9.84□□□□□ -0.83
PTPN1-201ENST00000371621 EYSQ5T1H1 3165 aa9.84□□□□□ -0.83
PTPN1-201ENST00000371621 A0A0J9YW62 118 aa9.84□□□□□ -0.83
PTPN1-201ENST00000371621 K7ERJ3 54 aa9.84□□□□□ -0.83
PTPN1-201ENST00000371621 TTC9CQ8N5M4 171 aa9.84□□□□□ -0.83
PTPN1-201ENST00000371621 NUP35Q8NFH5 326 aa9.84□□□□□ -0.83
PTPN1-201ENST00000371621 H1FXQ92522 213 aaKnown RBP9.84□□□□□ -0.83
PTPN1-201ENST00000371621 OCIAD1Q9NX40 245 aa9.84□□□□□ -0.83
PTPN1-201ENST00000371621 GABRG2P18507 467 aa9.84□□□□□ -0.83
PTPN1-201ENST00000371621 FOLR3P41439 243 aa9.84□□□□□ -0.83
PTPN1-201ENST00000371621 TBC1D28Q2M2D7 210 aa9.84□□□□□ -0.83
PTPN1-201ENST00000371621 FADS6Q8N9I5 356 aa9.84□□□□□ -0.83
PTPN1-201ENST00000371621 SYT8Q8NBV8 401 aa9.84□□□□□ -0.83
PTPN1-201ENST00000371621 MRPL13Q9BYD1 178 aaKnown RBP9.84□□□□□ -0.83
PTPN1-201ENST00000371621 RNF114Q9Y508 228 aa9.84□□□□□ -0.83
PTPN1-201ENST00000371621 ZSWIM8A7E2V4 1837 aa9.83□□□□□ -0.84
PTPN1-201ENST00000371621 K7EP34 96 aa9.83□□□□□ -0.84
PTPN1-201ENST00000371621 MRAP2Q96G30 205 aa9.83□□□□□ -0.84
PTPN1-201ENST00000371621 OBP2AQ9NY56 170 aa9.83□□□□□ -0.84
PTPN1-201ENST00000371621 WDR83OSQ9Y284 106 aa9.83□□□□□ -0.84
PTPN1-201ENST00000371621 NCBP2LA6PVI3 153 aaKnown RBP9.83□□□□□ -0.84
PTPN1-201ENST00000371621 ORM1P02763 201 aa9.83□□□□□ -0.84
PTPN1-201ENST00000371621 IGLC1P0CG04 106 aa9.83□□□□□ -0.84
PTPN1-201ENST00000371621 ZNF766Q5HY98 468 aa9.83□□□□□ -0.84
PTPN1-201ENST00000371621 TREML4Q6UXN2 200 aa9.83□□□□□ -0.84
PTPN1-201ENST00000371621 RPEQ96AT9 228 aa9.83□□□□□ -0.84
PTPN1-201ENST00000371621 HS3ST6Q96QI5 342 aa9.83□□□□□ -0.84
PTPN1-201ENST00000371621 SZT2Q5T011 3432 aa9.83□□□□□ -0.84
PTPN1-201ENST00000371621 CXCL10P02778 98 aa9.83□□□□□ -0.84
PTPN1-201ENST00000371621 TFF1P04155 84 aa9.83□□□□□ -0.84
PTPN1-201ENST00000371621 SRFP11831 508 aa9.83□□□□□ -0.84
PTPN1-201ENST00000371621 ZFAND6Q6FIF0 208 aa9.83□□□□□ -0.84
PTPN1-201ENST00000371621 WDR82Q6UXN9 313 aa9.83□□□□□ -0.84
PTPN1-201ENST00000371621 SPACA3Q8IXA5 215 aa9.83□□□□□ -0.84
PTPN1-201ENST00000371621 ZNF645Q8N7E2 425 aa9.83□□□□□ -0.84
PTPN1-201ENST00000371621 GRAMD2BQ96HH9 432 aa9.83□□□□□ -0.84
PTPN1-201ENST00000371621 TRBV20OR9-2A0A075B6H5 130 aa9.82□□□□□ -0.84
PTPN1-201ENST00000371621 TWIST1Q15672 202 aa9.82□□□□□ -0.84
PTPN1-201ENST00000371621 SRSF7Q16629 238 aaKnown RBP eCLIP9.82□□□□□ -0.84
PTPN1-201ENST00000371621 OR2Z1Q8NG97 314 aa9.82□□□□□ -0.84
PTPN1-201ENST00000371621 C19orf24Q9BVV8 132 aa9.82□□□□□ -0.84
PTPN1-201ENST00000371621 PNRC2Q9NPJ4 139 aaKnown RBP9.82□□□□□ -0.84
PTPN1-201ENST00000371621 CHD7Q9P2D1 2997 aa9.82□□□□□ -0.84
PTPN1-201ENST00000371621 TRBV20-1A0A075B6N2 111 aa9.82□□□□□ -0.84
PTPN1-201ENST00000371621 IGHMP01871 453 aa9.82□□□□□ -0.84
PTPN1-201ENST00000371621 GAGE2BQ13066 116 aa9.82□□□□□ -0.84
PTPN1-201ENST00000371621 GAGE2EQ4V326 116 aa9.82□□□□□ -0.84
PTPN1-201ENST00000371621 TMEM14EPQ6UXP3 125 aa9.82□□□□□ -0.84
PTPN1-201ENST00000371621 GAGE2DQ9UEU5 116 aa9.82□□□□□ -0.84
PTPN1-201ENST00000371621 COL6A6A6NMZ7 2263 aa9.82□□□□□ -0.84
PTPN1-201ENST00000371621 TMPRSS2O15393 492 aa9.82□□□□□ -0.84
PTPN1-201ENST00000371621 ANOS1P23352 680 aa9.82□□□□□ -0.84
PTPN1-201ENST00000371621 REG1BP48304 166 aa9.82□□□□□ -0.84
PTPN1-201ENST00000371621 DSCR4P56555 118 aaPredicted RBP9.82□□□□□ -0.84
PTPN1-201ENST00000371621 LYRM7Q5U5X0 104 aa9.82□□□□□ -0.84
PTPN1-201ENST00000371621 OR52E5Q8NH55 327 aa9.82□□□□□ -0.84
PTPN1-201ENST00000371621 DCTN5Q9BTE1 182 aa9.82□□□□□ -0.84
PTPN1-201ENST00000371621 MS4A6AQ9H2W1 248 aa9.82□□□□□ -0.84
PTPN1-201ENST00000371621 G3V4G9 280 aa9.81□□□□□ -0.84
PTPN1-201ENST00000371621 WNT2P09544 360 aa9.81□□□□□ -0.84
PTPN1-201ENST00000371621 GOLT1AQ6ZVE7 132 aa9.81□□□□□ -0.84
PTPN1-201ENST00000371621 KIR3DL3Q8N743 410 aa9.81□□□□□ -0.84
PTPN1-201ENST00000371621 FAM222BQ8WU58 562 aa9.81□□□□□ -0.84
PTPN1-201ENST00000371621 GGTLC1Q9BX51 225 aa9.81□□□□□ -0.84
PTPN1-201ENST00000371621 BOKQ9UMX3 212 aaPredicted RBP9.81□□□□□ -0.84
PTPN1-201ENST00000371621 OOEPA6NGQ2 149 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms