RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 NEU1Q99519 415 aa12.23□□□□□ -0.45
NDC1-201ENST00000371429 GPX4P36969 197 aaPredicted RBP12.23□□□□□ -0.45
NDC1-201ENST00000371429 HERPUD1Q15011 391 aa12.23□□□□□ -0.45
NDC1-201ENST00000371429 DUX3Q96PT4 197 aa12.23□□□□□ -0.45
NDC1-201ENST00000371429 MOB4Q9Y3A3 225 aa12.23□□□□□ -0.45
NDC1-201ENST00000371429 ZP1P60852 638 aa12.23□□□□□ -0.45
NDC1-201ENST00000371429 ZNF343Q6P1L6 599 aa12.23□□□□□ -0.45
NDC1-201ENST00000371429 BRD3OSQ6XYD6 125 aa12.23□□□□□ -0.45
NDC1-201ENST00000371429 TMEM144Q7Z5S9 345 aa12.23□□□□□ -0.45
NDC1-201ENST00000371429 DTX1Q86Y01 620 aa12.23□□□□□ -0.45
NDC1-201ENST00000371429 NEUROG1Q92886 237 aa12.23□□□□□ -0.45
NDC1-201ENST00000371429 PARLQ9H300 379 aa12.23□□□□□ -0.45
NDC1-201ENST00000371429 MAP1LC3AQ9H492 121 aa12.23□□□□□ -0.45
NDC1-201ENST00000371429 ATRXP46100 2492 aa12.23□□□□□ -0.45
NDC1-201ENST00000371429 J3QKU1 62 aa12.23□□□□□ -0.45
NDC1-201ENST00000371429 PSPNO60542 156 aa12.23□□□□□ -0.45
NDC1-201ENST00000371429 SAMD13Q5VXD3 122 aa12.23□□□□□ -0.45
NDC1-201ENST00000371429 TCF24Q7RTU0 167 aa12.23□□□□□ -0.45
NDC1-201ENST00000371429 RAMP3O60896 148 aa12.22□□□□□ -0.45
NDC1-201ENST00000371429 EGR1P18146 543 aa12.22□□□□□ -0.45
NDC1-201ENST00000371429 LYRM7Q5U5X0 104 aa12.22□□□□□ -0.45
NDC1-201ENST00000371429 TMEM219Q86XT9 240 aa12.22□□□□□ -0.45
NDC1-201ENST00000371429 DPH3Q96FX2 82 aa12.22□□□□□ -0.45
NDC1-201ENST00000371429 TRAF4Q9BUZ4 470 aaPredicted RBP12.22□□□□□ -0.45
NDC1-201ENST00000371429 NUDT3O95989 172 aa12.22□□□□□ -0.45
NDC1-201ENST00000371429 CGAP01215 116 aa12.22□□□□□ -0.45
NDC1-201ENST00000371429 KLRD1Q13241 179 aa12.22□□□□□ -0.45
NDC1-201ENST00000371429 PIP4P1Q86T03 277 aa12.22□□□□□ -0.45
NDC1-201ENST00000371429 BPESC1Q9GZL8 116 aa12.22□□□□□ -0.45
NDC1-201ENST00000371429 FAM209BQ5JX69 171 aa12.22□□□□□ -0.45
NDC1-201ENST00000371429 IGKV3OR2-268A0A0C4DH90 116 aa12.22□□□□□ -0.45
NDC1-201ENST00000371429 EMP1P54849 157 aa12.22□□□□□ -0.45
NDC1-201ENST00000371429 CENPWQ5EE01 88 aa12.22□□□□□ -0.45
NDC1-201ENST00000371429 ZNF600Q6ZNG1 722 aa12.22□□□□□ -0.45
NDC1-201ENST00000371429 LINC01587Q99440 93 aa12.22□□□□□ -0.45
NDC1-201ENST00000371429 SDHCQ99643 169 aaPredicted RBP12.22□□□□□ -0.45
NDC1-201ENST00000371429 H3BUX3 64 aa12.21□□□□□ -0.45
NDC1-201ENST00000371429 HTN3P15516 51 aa12.21□□□□□ -0.45
NDC1-201ENST00000371429 LDLRAD2Q5SZI1 272 aa12.21□□□□□ -0.45
NDC1-201ENST00000371429 AGAP20933 346 aa12.21□□□□□ -0.45
NDC1-201ENST00000371429 KIR2DL4Q99706 377 aa12.21□□□□□ -0.45
NDC1-201ENST00000371429 PRO1933Q9H354 126 aa12.21□□□□□ -0.45
NDC1-201ENST00000371429 TRAV41A0A0B4J266 112 aa12.21□□□□□ -0.46
NDC1-201ENST00000371429 TMEM262E9PQX1 116 aa12.21□□□□□ -0.46
NDC1-201ENST00000371429 M0R381 172 aa12.21□□□□□ -0.46
NDC1-201ENST00000371429 MINOS1Q5TGZ0 78 aa12.21□□□□□ -0.46
NDC1-201ENST00000371429 MINOS1-NBL1R4GNA1 71 aa12.21□□□□□ -0.46
NDC1-201ENST00000371429 ZNF324BQ6AW86 544 aaPredicted RBP12.21□□□□□ -0.46
NDC1-201ENST00000371429 CD177Q8N6Q3 437 aa12.21□□□□□ -0.46
NDC1-201ENST00000371429 ZNF525Q8N782 197 aa12.21□□□□□ -0.46
NDC1-201ENST00000371429 IGKV1-27A0A075B6S5 117 aa12.2□□□□□ -0.46
NDC1-201ENST00000371429 TRAV14DV4A0A0A6YYC5 116 aa12.2□□□□□ -0.46
NDC1-201ENST00000371429 MPTX1A8MV57 137 aa12.2□□□□□ -0.46
NDC1-201ENST00000371429 OOSP1A8MZH6 123 aa12.2□□□□□ -0.46
NDC1-201ENST00000371429 E7EQL1 145 aa12.2□□□□□ -0.46
NDC1-201ENST00000371429 COL8A2P25067 703 aa12.2□□□□□ -0.46
NDC1-201ENST00000371429 ASIPP42127 132 aa12.2□□□□□ -0.46
NDC1-201ENST00000371429 FAM169BQ8N8A8 192 aa12.2□□□□□ -0.46
NDC1-201ENST00000371429 CBY3A6NI87 242 aa12.2□□□□□ -0.46
NDC1-201ENST00000371429 M0R143 59 aa12.2□□□□□ -0.46
NDC1-201ENST00000371429 PVRIGQ6DKI7 326 aa12.2□□□□□ -0.46
NDC1-201ENST00000371429 RPRMLQ8N4K4 120 aa12.2□□□□□ -0.46
NDC1-201ENST00000371429 TMEM250H0YL14 139 aa12.2□□□□□ -0.46
NDC1-201ENST00000371429 EFNB1P98172 346 aa12.2□□□□□ -0.46
NDC1-201ENST00000371429 RNF125Q96EQ8 232 aa12.2□□□□□ -0.46
NDC1-201ENST00000371429 A0A0A6YYD4 124 aa12.2□□□□□ -0.46
NDC1-201ENST00000371429 PSMB11A5LHX3 300 aa12.2□□□□□ -0.46
NDC1-201ENST00000371429 STHQ8IWL8 128 aa12.2□□□□□ -0.46
NDC1-201ENST00000371429 PNRC2Q9NPJ4 139 aaKnown RBP12.2□□□□□ -0.46
NDC1-201ENST00000371429 ZFP30Q9Y2G7 519 aa12.2□□□□□ -0.46
NDC1-201ENST00000371429 GTF2H5Q6ZYL4 71 aa12.19□□□□□ -0.46
NDC1-201ENST00000371429 IGKV1D-8A0A087WSZ0 117 aa12.19□□□□□ -0.46
NDC1-201ENST00000371429 C5orf52A6NGY3 159 aa12.19□□□□□ -0.46
NDC1-201ENST00000371429 PRCDQ00LT1 54 aa12.19□□□□□ -0.46
NDC1-201ENST00000371429 NHLRC3Q5JS37 347 aa12.19□□□□□ -0.46
NDC1-201ENST00000371429 TICRRQ7Z2Z1 1910 aa12.19□□□□□ -0.46
NDC1-201ENST00000371429 MLNRO43193 412 aa12.19□□□□□ -0.46
NDC1-201ENST00000371429 LILRA1O75019 489 aa12.19□□□□□ -0.46
NDC1-201ENST00000371429 ARTNQ5T4W7 220 aa12.19□□□□□ -0.46
NDC1-201ENST00000371429 TPTE2P1Q5T6R2 138 aa12.19□□□□□ -0.46
NDC1-201ENST00000371429 KLK15Q9H2R5 256 aa12.19□□□□□ -0.46
NDC1-201ENST00000371429 CUL9Q8IWT3 2517 aa12.19□□□□□ -0.46
NDC1-201ENST00000371429 TRAV20A0A0B4J274 112 aa12.19□□□□□ -0.46
NDC1-201ENST00000371429 H7C1H1 209 aa12.19□□□□□ -0.46
NDC1-201ENST00000371429 SIP14410 1827 aa12.18□□□□□ -0.46
NDC1-201ENST00000371429 TRGV2A0A075B6R0 118 aa12.18□□□□□ -0.46
NDC1-201ENST00000371429 C5orf63A6NC05 138 aa12.18□□□□□ -0.46
NDC1-201ENST00000371429 F8VVB4 439 aa12.18□□□□□ -0.46
NDC1-201ENST00000371429 F8VWA3 439 aa12.18□□□□□ -0.46
NDC1-201ENST00000371429 TMEM167AQ8TBQ9 72 aa12.18□□□□□ -0.46
NDC1-201ENST00000371429 CLDN16Q9Y5I7 305 aa12.18□□□□□ -0.46
NDC1-201ENST00000371429 CACNA1AO00555 2505 aa12.18□□□□□ -0.46
NDC1-201ENST00000371429 TRBV20OR9-2A0A075B6H5 130 aa12.18□□□□□ -0.46
NDC1-201ENST00000371429 IFITM10A6NMD0 228 aa12.18□□□□□ -0.46
NDC1-201ENST00000371429 M0R1W7 72 aa12.18□□□□□ -0.46
NDC1-201ENST00000371429 NPFFO15130 113 aa12.18□□□□□ -0.46
NDC1-201ENST00000371429 MIR17HGQ75NE6 70 aa12.18□□□□□ -0.46
NDC1-201ENST00000371429 LINC01356Q8N9X3 169 aa12.18□□□□□ -0.46
NDC1-201ENST00000371429 IGHV1-3A0A0C4DH29 117 aa12.18□□□□□ -0.46
NDC1-201ENST00000371429 OR4C46A6NHA9 309 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms