RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 FREM1Q5H8C1 2179 aa13.26□□□□□ -0.29
CHD1L-203ENST00000369259 IGHV5-10-1A0A0J9YXX1 117 aa13.25□□□□□ -0.29
CHD1L-203ENST00000369259 PPIAL4DF5H284 164 aa13.25□□□□□ -0.29
CHD1L-203ENST00000369259 GRPP07492 148 aa13.25□□□□□ -0.29
CHD1L-203ENST00000369259 OR5AL1P0C617 328 aa13.25□□□□□ -0.29
CHD1L-203ENST00000369259 COX8AP10176 69 aa13.25□□□□□ -0.29
CHD1L-203ENST00000369259 HTR1DP28221 377 aa13.25□□□□□ -0.29
CHD1L-203ENST00000369259 FOXA3P55318 350 aaPredicted RBP13.25□□□□□ -0.29
CHD1L-203ENST00000369259 OR13A1Q8NGR1 328 aa13.25□□□□□ -0.29
CHD1L-203ENST00000369259 TMEM186Q96B77 213 aa13.25□□□□□ -0.29
CHD1L-203ENST00000369259 AP1S3Q96PC3 154 aa13.25□□□□□ -0.29
CHD1L-203ENST00000369259 C19orf24Q9BVV8 132 aa13.25□□□□□ -0.29
CHD1L-203ENST00000369259 C9orf118A6NHY6 69 aa13.25□□□□□ -0.29
CHD1L-203ENST00000369259 VWC2LB2RUY7 222 aa13.25□□□□□ -0.29
CHD1L-203ENST00000369259 LIPFP07098 398 aa13.25□□□□□ -0.29
CHD1L-203ENST00000369259 HIST1H1EP10412 219 aaKnown RBP13.25□□□□□ -0.29
CHD1L-203ENST00000369259 LGALS7P47929 136 aa13.25□□□□□ -0.29
CHD1L-203ENST00000369259 TMEM97Q5BJF2 176 aa13.25□□□□□ -0.29
CHD1L-203ENST00000369259 Q6ZR03 302 aa13.25□□□□□ -0.29
CHD1L-203ENST00000369259 BPIFA4PQ86YQ2 179 aa13.25□□□□□ -0.29
CHD1L-203ENST00000369259 H1FXQ92522 213 aaKnown RBP13.25□□□□□ -0.29
CHD1L-203ENST00000369259 ENY2Q9NPA8 101 aa13.25□□□□□ -0.29
CHD1L-203ENST00000369259 OR51B2Q9Y5P1 312 aa13.25□□□□□ -0.29
CHD1L-203ENST00000369259 CACNA1DQ01668 2161 aa13.25□□□□□ -0.29
CHD1L-203ENST00000369259 C15orf61A6NNL5 157 aa13.24□□□□□ -0.29
CHD1L-203ENST00000369259 C8orf88P0DMB2 117 aa13.24□□□□□ -0.29
CHD1L-203ENST00000369259 GDF1P27539 372 aa13.24□□□□□ -0.29
CHD1L-203ENST00000369259 HBBP68871 147 aa13.24□□□□□ -0.29
CHD1L-203ENST00000369259 PRR31Q5SQ13 230 aa13.24□□□□□ -0.29
CHD1L-203ENST00000369259 NEGR1Q7Z3B1 354 aa13.24□□□□□ -0.29
CHD1L-203ENST00000369259 TPRX1Q8N7U7 411 aa13.24□□□□□ -0.29
CHD1L-203ENST00000369259 A0A1W2PQM1 296 aa13.24□□□□□ -0.29
CHD1L-203ENST00000369259 C9orf172C9J069 976 aa13.24□□□□□ -0.29
CHD1L-203ENST00000369259 K7EP34 96 aa13.24□□□□□ -0.29
CHD1L-203ENST00000369259 APOA2P02652 100 aa13.24□□□□□ -0.29
CHD1L-203ENST00000369259 SRYQ05066 204 aa13.24□□□□□ -0.29
CHD1L-203ENST00000369259 TMEM251Q8N6I4 163 aa13.24□□□□□ -0.29
CHD1L-203ENST00000369259 AMMECR1Q9Y4X0 333 aaPredicted RBP13.24□□□□□ -0.29
CHD1L-203ENST00000369259 NCKAP5O14513 1909 aa13.23□□□□□ -0.29
CHD1L-203ENST00000369259 H3BRM9 83 aa13.23□□□□□ -0.29
CHD1L-203ENST00000369259 WNT9BO14905 357 aa13.23□□□□□ -0.29
CHD1L-203ENST00000369259 SPINT2O43291 252 aa13.23□□□□□ -0.29
CHD1L-203ENST00000369259 ADH4P08319 380 aa13.23□□□□□ -0.29
CHD1L-203ENST00000369259 MRPL49Q13405 166 aaKnown RBP13.23□□□□□ -0.29
CHD1L-203ENST00000369259 LTC4SQ16873 150 aa13.23□□□□□ -0.29
CHD1L-203ENST00000369259 OR1N2Q8NGR9 330 aa13.23□□□□□ -0.29
CHD1L-203ENST00000369259 SLC25A33Q9BSK2 321 aa13.23□□□□□ -0.29
CHD1L-203ENST00000369259 MCRIP2Q9BUT9 160 aaKnown RBP13.23□□□□□ -0.29
CHD1L-203ENST00000369259 HSPE1P61604 102 aaKnown RBP13.23□□□□□ -0.29
CHD1L-203ENST00000369259 FOXE3Q13461 319 aa13.23□□□□□ -0.29
CHD1L-203ENST00000369259 SAMD13Q5VXD3 122 aa13.23□□□□□ -0.29
CHD1L-203ENST00000369259 CT55Q8WUE5 264 aa13.23□□□□□ -0.29
CHD1L-203ENST00000369259 S1PR3Q99500 378 aa13.23□□□□□ -0.29
CHD1L-203ENST00000369259 LYSMD4Q5XG99 296 aa13.22□□□□□ -0.29
CHD1L-203ENST00000369259 PLPPR2Q96GM1 343 aa13.22□□□□□ -0.29
CHD1L-203ENST00000369259 JMJD8Q96S16 334 aa13.22□□□□□ -0.29
CHD1L-203ENST00000369259 IGKV1OR2-108A0A075B7D4 117 aa13.22□□□□□ -0.29
CHD1L-203ENST00000369259 H0Y8G0 127 aa13.22□□□□□ -0.29
CHD1L-203ENST00000369259 C15orf65H3BRN8 121 aa13.22□□□□□ -0.29
CHD1L-203ENST00000369259 TFF1P04155 84 aa13.22□□□□□ -0.29
CHD1L-203ENST00000369259 CD24P25063 80 aa13.22□□□□□ -0.29
CHD1L-203ENST00000369259 UBE2L3P68036 154 aaKnown RBP13.22□□□□□ -0.29
CHD1L-203ENST00000369259 LINC01545Q5VT33 79 aa13.22□□□□□ -0.29
CHD1L-203ENST00000369259 GUSBP11Q6P575 273 aa13.22□□□□□ -0.29
CHD1L-203ENST00000369259 HSPB8Q9UJY1 196 aa13.22□□□□□ -0.29
CHD1L-203ENST00000369259 HCFC1P51610 2035 aa13.22□□□□□ -0.29
CHD1L-203ENST00000369259 TET2Q6N021 2002 aaPredicted RBP13.22□□□□□ -0.29
CHD1L-203ENST00000369259 KLF7O75840 302 aaPredicted RBP13.21□□□□□ -0.29
CHD1L-203ENST00000369259 CER1O95813 267 aa13.21□□□□□ -0.29
CHD1L-203ENST00000369259 BMI1P35226 326 aa13.21□□□□□ -0.29
CHD1L-203ENST00000369259 UQCRFS1P47985 274 aa13.21□□□□□ -0.29
CHD1L-203ENST00000369259 RPL39P5Q59GN2 51 aa13.21□□□□□ -0.29
CHD1L-203ENST00000369259 FOXA2Q9Y261 457 aaPredicted RBP13.21□□□□□ -0.29
CHD1L-203ENST00000369259 A6NDN8 102 aa13.21□□□□□ -0.3
CHD1L-203ENST00000369259 H3BUT2 72 aa13.21□□□□□ -0.3
CHD1L-203ENST00000369259 PEX7O00628 323 aa13.21□□□□□ -0.3
CHD1L-203ENST00000369259 SNAI2O43623 268 aa13.21□□□□□ -0.3
CHD1L-203ENST00000369259 ALKBH6Q3KRA9 238 aa13.21□□□□□ -0.3
CHD1L-203ENST00000369259 MOB3BQ86TA1 216 aa13.21□□□□□ -0.3
CHD1L-203ENST00000369259 OR2K2Q8NGT1 345 aa13.21□□□□□ -0.3
CHD1L-203ENST00000369259 PRR7Q8TB68 274 aa13.21□□□□□ -0.3
CHD1L-203ENST00000369259 LRRC29Q8WV35 223 aa13.21□□□□□ -0.3
CHD1L-203ENST00000369259 C7orf69Q9H7B7 122 aa13.21□□□□□ -0.3
CHD1L-203ENST00000369259 TMEM14BQ9NUH8 114 aa13.21□□□□□ -0.3
CHD1L-203ENST00000369259 PTPRBP23467 1997 aa13.2□□□□□ -0.3
CHD1L-203ENST00000369259 SPTBN5Q9NRC6 3674 aaKnown RBP13.2□□□□□ -0.3
CHD1L-203ENST00000369259 KIR2DS2P43631 304 aa13.2□□□□□ -0.3
CHD1L-203ENST00000369259 HOXA4Q00056 320 aaPredicted RBP13.2□□□□□ -0.3
CHD1L-203ENST00000369259 ZNF826PQ6ZT77 177 aa13.2□□□□□ -0.3
CHD1L-203ENST00000369259 FAM167A-AS1Q96KT0 104 aa13.2□□□□□ -0.3
CHD1L-203ENST00000369259 DCTN5Q9BTE1 182 aa13.2□□□□□ -0.3
CHD1L-203ENST00000369259 SLC25A2Q9BXI2 301 aa13.2□□□□□ -0.3
CHD1L-203ENST00000369259 MRPL32Q9BYC8 188 aaKnown RBP13.2□□□□□ -0.3
CHD1L-203ENST00000369259 SELENOKQ9Y6D0 94 aa13.2□□□□□ -0.3
CHD1L-203ENST00000369259 TMEM238LA0A1B0GVL6 79 aa13.2□□□□□ -0.3
CHD1L-203ENST00000369259 PINLYPA6NC86 204 aa13.2□□□□□ -0.3
CHD1L-203ENST00000369259 ZNF329Q86UD4 541 aa13.2□□□□□ -0.3
CHD1L-203ENST00000369259 SPEM1Q8N4L4 309 aa13.2□□□□□ -0.3
CHD1L-203ENST00000369259 OR10AG1Q8NH19 301 aa13.2□□□□□ -0.3
CHD1L-203ENST00000369259 HINT2Q9BX68 163 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms