RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 SRPXP78539 464 aa17.06■□□□□ 0.32
ECHDC1-203ENST00000368291 LRTM2Q8N967 370 aa17.06■□□□□ 0.32
ECHDC1-203ENST00000368291 MISP3Q96FF7 219 aa17.06■□□□□ 0.32
ECHDC1-203ENST00000368291 BATF3Q9NR55 127 aa17.06■□□□□ 0.32
ECHDC1-203ENST00000368291 C21orf62Q9NYP8 219 aa17.06■□□□□ 0.32
ECHDC1-203ENST00000368291 CENPXA8MT69 81 aa17.05■□□□□ 0.32
ECHDC1-203ENST00000368291 LGALS9O00182 355 aa17.05■□□□□ 0.32
ECHDC1-203ENST00000368291 EDN2P20800 178 aa17.05■□□□□ 0.32
ECHDC1-203ENST00000368291 HOXA1P49639 335 aaPredicted RBP17.05■□□□□ 0.32
ECHDC1-203ENST00000368291 BSXQ3C1V8 233 aa17.05■□□□□ 0.32
ECHDC1-203ENST00000368291 ATP6V0BQ99437 205 aa17.05■□□□□ 0.32
ECHDC1-203ENST00000368291 CCDC32Q9BV29 185 aa17.05■□□□□ 0.32
ECHDC1-203ENST00000368291 PEMTQ9UBM1 199 aa17.05■□□□□ 0.32
ECHDC1-203ENST00000368291 TGP01266 2768 aa17.05■□□□□ 0.32
ECHDC1-203ENST00000368291 OR2T8A6NH00 312 aa17.04■□□□□ 0.32
ECHDC1-203ENST00000368291 TGOLN2O43493 480 aa17.04■□□□□ 0.32
ECHDC1-203ENST00000368291 SULT1A3P0DMM9 295 aa17.04■□□□□ 0.32
ECHDC1-203ENST00000368291 SULT1A4P0DMN0 295 aa17.04■□□□□ 0.32
ECHDC1-203ENST00000368291 PLET1Q6UQ28 207 aa17.04■□□□□ 0.32
ECHDC1-203ENST00000368291 S100ZQ8WXG8 99 aa17.04■□□□□ 0.32
ECHDC1-203ENST00000368291 ZNF414Q96IQ9 312 aa17.04■□□□□ 0.32
ECHDC1-203ENST00000368291 LYRM1O43325 122 aa17.03■□□□□ 0.32
ECHDC1-203ENST00000368291 NXPH3O95157 252 aa17.03■□□□□ 0.32
ECHDC1-203ENST00000368291 MT-CO2P00403 227 aa17.03■□□□□ 0.32
ECHDC1-203ENST00000368291 SNCAP37840 140 aa17.03■□□□□ 0.32
ECHDC1-203ENST00000368291 UBE2MP61081 183 aaKnown RBP17.03■□□□□ 0.32
ECHDC1-203ENST00000368291 C11orf87Q6NUJ2 197 aa17.03■□□□□ 0.32
ECHDC1-203ENST00000368291 BSCL2Q96G97 398 aaPredicted RBP17.03■□□□□ 0.32
ECHDC1-203ENST00000368291 CHRDL1Q9BU40 450 aa17.03■□□□□ 0.32
ECHDC1-203ENST00000368291 LSM4Q9Y4Z0 139 aaKnown RBP17.03■□□□□ 0.32
ECHDC1-203ENST00000368291 IGHV3-35A0A0C4DH35 117 aa17.02■□□□□ 0.32
ECHDC1-203ENST00000368291 DUXBA0A1W2PPF3 345 aa17.02■□□□□ 0.32
ECHDC1-203ENST00000368291 C2orf70A6NJV1 201 aa17.02■□□□□ 0.32
ECHDC1-203ENST00000368291 IGHV3-48P01763 117 aa17.02■□□□□ 0.32
ECHDC1-203ENST00000368291 ADMP35318 185 aa17.02■□□□□ 0.32
ECHDC1-203ENST00000368291 SMCO1Q147U7 214 aa17.02■□□□□ 0.32
ECHDC1-203ENST00000368291 UNQ9165/PRO28630Q6UXU0 137 aa17.02■□□□□ 0.32
ECHDC1-203ENST00000368291 ZNF436Q9C0F3 470 aaPredicted RBP17.02■□□□□ 0.32
ECHDC1-203ENST00000368291 ENY2Q9NPA8 101 aa17.02■□□□□ 0.32
ECHDC1-203ENST00000368291 C9orf170A2RU37 121 aa17.02■□□□□ 0.31
ECHDC1-203ENST00000368291 A8MWP6 167 aa17.02■□□□□ 0.31
ECHDC1-203ENST00000368291 FCGR2BP31994 310 aaPredicted RBP17.02■□□□□ 0.31
ECHDC1-203ENST00000368291 FAM106AQ4KMX7 169 aa17.02■□□□□ 0.31
ECHDC1-203ENST00000368291 PINX1Q96BK5 328 aaKnown RBP17.02■□□□□ 0.31
ECHDC1-203ENST00000368291 HSPB7Q9UBY9 170 aa17.02■□□□□ 0.31
ECHDC1-203ENST00000368291 A0A1B0GU03 582 aa17.01■□□□□ 0.31
ECHDC1-203ENST00000368291 TMEM213A2RRL7 107 aa17.01■□□□□ 0.31
ECHDC1-203ENST00000368291 PITX3O75364 302 aa17.01■□□□□ 0.31
ECHDC1-203ENST00000368291 LY86O95711 162 aa17.01■□□□□ 0.31
ECHDC1-203ENST00000368291 CTSGP08311 255 aa17.01■□□□□ 0.31
ECHDC1-203ENST00000368291 GP9P14770 177 aa17.01■□□□□ 0.31
ECHDC1-203ENST00000368291 TNFRSF9Q07011 255 aa17.01■□□□□ 0.31
ECHDC1-203ENST00000368291 DEFB121Q5J5C9 76 aa17.01■□□□□ 0.31
ECHDC1-203ENST00000368291 SPSB3Q6PJ21 355 aa17.01■□□□□ 0.31
ECHDC1-203ENST00000368291 UBAC2Q8NBM4 344 aa17.01■□□□□ 0.31
ECHDC1-203ENST00000368291 PIGBOS1A0A0B4J2F0 54 aa17■□□□□ 0.31
ECHDC1-203ENST00000368291 ZNF320A2RRD8 509 aa17■□□□□ 0.31
ECHDC1-203ENST00000368291 CEBPZOSA8MTT3 80 aa17■□□□□ 0.31
ECHDC1-203ENST00000368291 OR4E1P0C645 316 aa17■□□□□ 0.31
ECHDC1-203ENST00000368291 ANXA7P20073 488 aaKnown RBP17■□□□□ 0.31
ECHDC1-203ENST00000368291 MFAP4P55083 255 aa17■□□□□ 0.31
ECHDC1-203ENST00000368291 Q56UQ5 140 aa17■□□□□ 0.31
ECHDC1-203ENST00000368291 TMEM170AQ8WVE7 144 aa17■□□□□ 0.31
ECHDC1-203ENST00000368291 FNDC4Q9H6D8 234 aaPredicted RBP17■□□□□ 0.31
ECHDC1-203ENST00000368291 HEYLQ9NQ87 328 aaPredicted RBP17■□□□□ 0.31
ECHDC1-203ENST00000368291 IZUMO1RA6ND01 250 aa16.99■□□□□ 0.31
ECHDC1-203ENST00000368291 FOLR2P14207 255 aa16.99■□□□□ 0.31
ECHDC1-203ENST00000368291 SUB1P53999 127 aaKnown RBP eCLIP16.99■□□□□ 0.31
ECHDC1-203ENST00000368291 DHRS2Q13268 280 aa16.99■□□□□ 0.31
ECHDC1-203ENST00000368291 CACNG8Q8WXS5 425 aa16.99■□□□□ 0.31
ECHDC1-203ENST00000368291 TXN2Q99757 166 aa16.99■□□□□ 0.31
ECHDC1-203ENST00000368291 CACFD1Q9UGQ2 172 aa16.99■□□□□ 0.31
ECHDC1-203ENST00000368291 TBC1D24Q9ULP9 559 aa16.99■□□□□ 0.31
ECHDC1-203ENST00000368291 TMED3Q9Y3Q3 217 aa16.99■□□□□ 0.31
ECHDC1-203ENST00000368291 DNAH9Q9NYC9 4486 aa16.99■□□□□ 0.31
ECHDC1-203ENST00000368291 HOXB5P09067 269 aa16.98■□□□□ 0.31
ECHDC1-203ENST00000368291 SLC25A6P12236 298 aa16.98■□□□□ 0.31
ECHDC1-203ENST00000368291 CBLN1P23435 193 aa16.98■□□□□ 0.31
ECHDC1-203ENST00000368291 HTR2BP41595 481 aa16.98■□□□□ 0.31
ECHDC1-203ENST00000368291 MLANAQ16655 118 aa16.98■□□□□ 0.31
ECHDC1-203ENST00000368291 TM4SF20Q53R12 229 aa16.98■□□□□ 0.31
ECHDC1-203ENST00000368291 C2orf83Q53S99 150 aa16.98■□□□□ 0.31
ECHDC1-203ENST00000368291 LYG2Q86SG7 212 aa16.98■□□□□ 0.31
ECHDC1-203ENST00000368291 C20orf85Q9H1P6 137 aa16.98■□□□□ 0.31
ECHDC1-203ENST00000368291 RBKSQ9H477 322 aa16.98■□□□□ 0.31
ECHDC1-203ENST00000368291 MRPL36Q9P0J6 103 aaKnown RBP16.98■□□□□ 0.31
ECHDC1-203ENST00000368291 CORTO00230 105 aa16.97■□□□□ 0.31
ECHDC1-203ENST00000368291 TCRBP04435 133 aa16.97■□□□□ 0.31
ECHDC1-203ENST00000368291 GGNBP1Q5YKI7 109 aa16.97■□□□□ 0.31
ECHDC1-203ENST00000368291 SLC24A4Q8NFF2 622 aa16.97■□□□□ 0.31
ECHDC1-203ENST00000368291 OR1S1Q8NH92 325 aa16.97■□□□□ 0.31
ECHDC1-203ENST00000368291 TMEM190Q8WZ59 177 aa16.97■□□□□ 0.31
ECHDC1-203ENST00000368291 WDR12Q9GZL7 423 aaKnown RBP16.97■□□□□ 0.31
ECHDC1-203ENST00000368291 GAR1Q9NY12 217 aaKnown RBP16.97■□□□□ 0.31
ECHDC1-203ENST00000368291 ZNF846Q147U1 533 aa16.96■□□□□ 0.31
ECHDC1-203ENST00000368291 DEFB114Q30KQ6 69 aa16.96■□□□□ 0.31
ECHDC1-203ENST00000368291 CD300EQ496F6 205 aaPredicted RBP16.96■□□□□ 0.31
ECHDC1-203ENST00000368291 NDUFA4O00483 81 aa16.95■□□□□ 0.3
ECHDC1-203ENST00000368291 ADAP1O75689 374 aa16.95■□□□□ 0.3
ECHDC1-203ENST00000368291 C8orf88P0DMB2 117 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms