RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 IGFBP3P17936 291 aaPredicted RBP8.89□□□□□ -0.99
PTPRK-205ENST00000368213 DEFA6Q01524 100 aa8.89□□□□□ -0.99
PTPRK-205ENST00000368213 DEFB113Q30KQ7 82 aa8.89□□□□□ -0.99
PTPRK-205ENST00000368213 OR1N2Q8NGR9 330 aa8.89□□□□□ -0.99
PTPRK-205ENST00000368213 E9PQ18 207 aa8.88□□□□□ -0.99
PTPRK-205ENST00000368213 M0R381 172 aa8.88□□□□□ -0.99
PTPRK-205ENST00000368213 TDGF1P13385 188 aa8.88□□□□□ -0.99
PTPRK-205ENST00000368213 PAX1P15863 534 aa8.88□□□□□ -0.99
PTPRK-205ENST00000368213 RPL35AP18077 110 aaKnown RBP8.88□□□□□ -0.99
PTPRK-205ENST00000368213 TCF24Q7RTU0 167 aa8.88□□□□□ -0.99
PTPRK-205ENST00000368213 DCAF16Q9NXF7 216 aa8.88□□□□□ -0.99
PTPRK-205ENST00000368213 C7orf66A4D0T2 115 aa8.88□□□□□ -0.99
PTPRK-205ENST00000368213 C15orf61A6NNL5 157 aa8.88□□□□□ -0.99
PTPRK-205ENST00000368213 B4DEV8 164 aa8.88□□□□□ -0.99
PTPRK-205ENST00000368213 M0R3E3 92 aa8.88□□□□□ -0.99
PTPRK-205ENST00000368213 C15orf32Q32M92 178 aa8.88□□□□□ -0.99
PTPRK-205ENST00000368213 SLX1AQ9BQ83 275 aa8.88□□□□□ -0.99
PTPRK-205ENST00000368213 BUB1B-PAK6H3BSN5 160 aa8.88□□□□□ -0.99
PTPRK-205ENST00000368213 NUDT3O95989 172 aa8.88□□□□□ -0.99
PTPRK-205ENST00000368213 PSMG4Q5JS54 123 aa8.88□□□□□ -0.99
PTPRK-205ENST00000368213 TOMM20LQ6UXN7 152 aa8.88□□□□□ -0.99
PTPRK-205ENST00000368213 ANGPTL6Q8NI99 470 aa8.88□□□□□ -0.99
PTPRK-205ENST00000368213 GGACTQ9BVM4 153 aa8.88□□□□□ -0.99
PTPRK-205ENST00000368213 ZNF660Q6AZW8 331 aaPredicted RBP8.88□□□□□ -0.99
PTPRK-205ENST00000368213 SPSB4Q96A44 273 aa8.88□□□□□ -0.99
PTPRK-205ENST00000368213 KIR2DL4Q99706 377 aa8.88□□□□□ -0.99
PTPRK-205ENST00000368213 FAM215AQ9Y5M1 114 aa8.88□□□□□ -0.99
PTPRK-205ENST00000368213 KLF2Q9Y5W3 355 aaPredicted RBP8.88□□□□□ -0.99
PTPRK-205ENST00000368213 NBASA2RRP1 2371 aa8.88□□□□□ -0.99
PTPRK-205ENST00000368213 GCGP01275 180 aa8.88□□□□□ -0.99
PTPRK-205ENST00000368213 PRTN3P24158 256 aa8.88□□□□□ -0.99
PTPRK-205ENST00000368213 UCP1P25874 307 aa8.88□□□□□ -0.99
PTPRK-205ENST00000368213 OR52E5Q8NH55 327 aa8.88□□□□□ -0.99
PTPRK-205ENST00000368213 RNF125Q96EQ8 232 aa8.88□□□□□ -0.99
PTPRK-205ENST00000368213 VAMP8Q9BV40 100 aa8.88□□□□□ -0.99
PTPRK-205ENST00000368213 IGHV1-69DA0A0B4J2H0 117 aa8.87□□□□□ -0.99
PTPRK-205ENST00000368213 EIF3GO75821 320 aaKnown RBP eCLIP8.87□□□□□ -0.99
PTPRK-205ENST00000368213 IGHV1-69P01742 117 aa8.87□□□□□ -0.99
PTPRK-205ENST00000368213 GCSHP23434 173 aa8.87□□□□□ -0.99
PTPRK-205ENST00000368213 FUT9Q9Y231 359 aa8.87□□□□□ -0.99
PTPRK-205ENST00000368213 TRGV4A0A0C4DH28 118 aa8.87□□□□□ -0.99
PTPRK-205ENST00000368213 FAM74A7A6NL05 159 aa8.87□□□□□ -0.99
PTPRK-205ENST00000368213 ZNF502Q8TBZ5 544 aa8.87□□□□□ -0.99
PTPRK-205ENST00000368213 SLC50A1Q9BRV3 221 aa8.87□□□□□ -0.99
PTPRK-205ENST00000368213 H3BQ15 152 aa8.87□□□□□ -0.99
PTPRK-205ENST00000368213 GCHFRP30047 84 aa8.87□□□□□ -0.99
PTPRK-205ENST00000368213 GPX4P36969 197 aaPredicted RBP8.87□□□□□ -0.99
PTPRK-205ENST00000368213 PRSS8Q16651 343 aa8.87□□□□□ -0.99
PTPRK-205ENST00000368213 HSPB8Q9UJY1 196 aa8.87□□□□□ -0.99
PTPRK-205ENST00000368213 SNRNP200O75643 2136 aaKnown RBP8.87□□□□□ -0.99
PTPRK-205ENST00000368213 DUTP33316 252 aaKnown RBP8.86□□□□□ -0.99
PTPRK-205ENST00000368213 AWAT1Q58HT5 328 aa8.86□□□□□ -0.99
PTPRK-205ENST00000368213 DMRTC2Q8IXT2 367 aaPredicted RBP8.86□□□□□ -0.99
PTPRK-205ENST00000368213 RNF5Q99942 180 aa8.86□□□□□ -0.99
PTPRK-205ENST00000368213 TMEM191AQ9H0A3 160 aa8.86□□□□□ -0.99
PTPRK-205ENST00000368213 CCKARP32238 428 aa8.86□□□□□ -0.99
PTPRK-205ENST00000368213 PSMB2P49721 201 aa8.86□□□□□ -0.99
PTPRK-205ENST00000368213 MEF2BQ02080 365 aaPredicted RBP8.86□□□□□ -0.99
PTPRK-205ENST00000368213 C5orf64Q2M2E5 130 aa8.86□□□□□ -0.99
PTPRK-205ENST00000368213 UBE2E1P51965 193 aa8.86□□□□□ -0.99
PTPRK-205ENST00000368213 SIGIRRQ6IA17 410 aa8.86□□□□□ -0.99
PTPRK-205ENST00000368213 MAP1LC3AQ9H492 121 aa8.86□□□□□ -0.99
PTPRK-205ENST00000368213 RBFOX2O43251 390 aaKnown RBP eCLIP8.86□□□□□ -0.991e-6■■■■■ 27.3
PTPRK-205ENST00000368213 PSPNO60542 156 aa8.86□□□□□ -0.99
PTPRK-205ENST00000368213 CD5P06127 495 aa8.86□□□□□ -0.99
PTPRK-205ENST00000368213 CD7P09564 240 aa8.86□□□□□ -0.99
PTPRK-205ENST00000368213 SRSF9Q13242 221 aaKnown RBP eCLIP8.86□□□□□ -0.99
PTPRK-205ENST00000368213 DHRS11Q6UWP2 260 aa8.86□□□□□ -0.99
PTPRK-205ENST00000368213 OR5AN1Q8NGI8 311 aa8.86□□□□□ -0.99
PTPRK-205ENST00000368213 PRO3102Q9H379 93 aa8.86□□□□□ -0.99
PTPRK-205ENST00000368213 GEMIN7Q9H840 131 aaKnown RBP8.86□□□□□ -0.99
PTPRK-205ENST00000368213 IGHV2-70DA0A0C4DH43 119 aa8.86□□□□□ -0.99
PTPRK-205ENST00000368213 PRSS2P07478 247 aa8.86□□□□□ -0.99
PTPRK-205ENST00000368213 SLC25A48Q6ZT89 311 aaKnown RBP8.86□□□□□ -0.99
PTPRK-205ENST00000368213 DTX2Q86UW9 622 aa8.86□□□□□ -0.99
PTPRK-205ENST00000368213 SGMS2Q8NHU3 365 aa8.86□□□□□ -0.99
PTPRK-205ENST00000368213 VGLL1Q99990 258 aa8.86□□□□□ -0.99
PTPRK-205ENST00000368213 IGKV1D-13A0A0B4J2D9 117 aa8.85□□□□□ -0.99
PTPRK-205ENST00000368213 IGKV1-13P0DP09 117 aa8.85□□□□□ -0.99
PTPRK-205ENST00000368213 AGAP20933 346 aa8.85□□□□□ -0.99
PTPRK-205ENST00000368213 SULT1A2P50226 295 aa8.85□□□□□ -0.99
PTPRK-205ENST00000368213 SIGLEC15Q6ZMC9 328 aa8.85□□□□□ -0.99
PTPRK-205ENST00000368213 CHAC2Q8WUX2 184 aa8.85□□□□□ -0.99
PTPRK-205ENST00000368213 USMG5Q96IX5 58 aa8.85□□□□□ -0.99
PTPRK-205ENST00000368213 NPCDR1Q9BY65 106 aa8.85□□□□□ -0.99
PTPRK-205ENST00000368213 GSX1Q9H4S2 264 aaPredicted RBP8.85□□□□□ -0.99
PTPRK-205ENST00000368213 RAMP3O60896 148 aa8.85□□□□□ -0.99
PTPRK-205ENST00000368213 GATA2P23769 480 aaPredicted RBP8.85□□□□□ -0.99
PTPRK-205ENST00000368213 GATA4P43694 442 aa8.85□□□□□ -0.99
PTPRK-205ENST00000368213 ELOBQ15370 118 aa8.85□□□□□ -0.99
PTPRK-205ENST00000368213 MUC21Q5SSG8 566 aa8.85□□□□□ -0.99
PTPRK-205ENST00000368213 HIST1H2BAQ96A08 127 aa8.85□□□□□ -0.99
PTPRK-205ENST00000368213 IGKV1-12A0A0C4DH73 117 aa8.85□□□□□ -0.99
PTPRK-205ENST00000368213 OR11H12B2RN74 326 aa8.85□□□□□ -0.99
PTPRK-205ENST00000368213 IGKV1D-12P01611 117 aa8.85□□□□□ -0.99
PTPRK-205ENST00000368213 PMS2P11Q13670 270 aa8.85□□□□□ -0.99
PTPRK-205ENST00000368213 ZNF415Q09FC8 603 aa8.85□□□□□ -0.99
PTPRK-205ENST00000368213 WFDC12Q8WWY7 111 aa8.85□□□□□ -0.99
PTPRK-205ENST00000368213 BET1LQ9NYM9 111 aa8.85□□□□□ -0.99
PTPRK-205ENST00000368213 IGKV1D-17A0A075B6S4 117 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms