RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 SCO2A0A1W2PP80 73 aa10.19□□□□□ -0.78
PTPRK-203ENST00000368207 MARVELD3Q96A59 401 aa10.19□□□□□ -0.78
PTPRK-203ENST00000368207 ADIPOQQ15848 244 aa10.19□□□□□ -0.78
PTPRK-203ENST00000368207 CACNG8Q8WXS5 425 aa10.19□□□□□ -0.78
PTPRK-203ENST00000368207 SFRP2Q96HF1 295 aa10.19□□□□□ -0.78
PTPRK-203ENST00000368207 MRPL18Q9H0U6 180 aaKnown RBP10.19□□□□□ -0.78
PTPRK-203ENST00000368207 IGKV1D-17A0A075B6S4 117 aa10.19□□□□□ -0.78
PTPRK-203ENST00000368207 IGKV1-5P01602 117 aa10.19□□□□□ -0.78
PTPRK-203ENST00000368207 IGHV3-11P01762 117 aa10.19□□□□□ -0.78
PTPRK-203ENST00000368207 MT-ND6P03923 174 aa10.19□□□□□ -0.78
PTPRK-203ENST00000368207 SMIM6P0DI80 62 aa10.19□□□□□ -0.78
PTPRK-203ENST00000368207 GCSAMLQ5JQS6 135 aa10.19□□□□□ -0.78
PTPRK-203ENST00000368207 HEPN1Q6WQI6 88 aa10.19□□□□□ -0.78
PTPRK-203ENST00000368207 COLCA1Q6ZS62 124 aa10.19□□□□□ -0.78
PTPRK-203ENST00000368207 DOCK11Q5JSL3 2073 aa10.19□□□□□ -0.78
PTPRK-203ENST00000368207 ZNF503-AS2A6NEH8 195 aa10.18□□□□□ -0.78
PTPRK-203ENST00000368207 IGKV3-20P01619 116 aa10.18□□□□□ -0.78
PTPRK-203ENST00000368207 TMEM200BQ69YZ2 307 aa10.18□□□□□ -0.78
PTPRK-203ENST00000368207 ZNF383Q8NA42 475 aa10.18□□□□□ -0.78
PTPRK-203ENST00000368207 SLC25A33Q9BSK2 321 aa10.18□□□□□ -0.78
PTPRK-203ENST00000368207 GPR61Q9BZJ8 451 aa10.18□□□□□ -0.78
PTPRK-203ENST00000368207 ANKHD1Q8IWZ3 2542 aaKnown RBP10.18□□□□□ -0.78
PTPRK-203ENST00000368207 C2orf16Q68DN1 1984 aa10.18□□□□□ -0.78
PTPRK-203ENST00000368207 CENPFP49454 3210 aa10.18□□□□□ -0.78
PTPRK-203ENST00000368207 ZNF98A6NK75 572 aa10.18□□□□□ -0.78
PTPRK-203ENST00000368207 SLC17A3O00476 420 aa10.18□□□□□ -0.78
PTPRK-203ENST00000368207 CCL20P78556 96 aa10.18□□□□□ -0.78
PTPRK-203ENST00000368207 RELQ04864 619 aaPredicted RBP10.18□□□□□ -0.78
PTPRK-203ENST00000368207 CLDND2Q8NHS1 167 aa10.18□□□□□ -0.78
PTPRK-203ENST00000368207 NEU1Q99519 415 aa10.18□□□□□ -0.78
PTPRK-203ENST00000368207 MAP1LC3CQ9BXW4 147 aa10.18□□□□□ -0.78
PTPRK-203ENST00000368207 MED13Q9UHV7 2174 aa10.18□□□□□ -0.78
PTPRK-203ENST00000368207 FOXI3A8MTJ6 420 aaPredicted RBP10.18□□□□□ -0.78
PTPRK-203ENST00000368207 OR52E5Q8NH55 327 aa10.18□□□□□ -0.78
PTPRK-203ENST00000368207 HSPB9Q9BQS6 159 aa10.18□□□□□ -0.78
PTPRK-203ENST00000368207 CXorf65A6NEN9 183 aa10.18□□□□□ -0.78
PTPRK-203ENST00000368207 RSPO1Q2MKA7 263 aaPredicted RBP10.18□□□□□ -0.78
PTPRK-203ENST00000368207 Q6ZN92 141 aa10.18□□□□□ -0.78
PTPRK-203ENST00000368207 RNASEH2CQ8TDP1 164 aaKnown RBP10.18□□□□□ -0.78
PTPRK-203ENST00000368207 NCOR2Q9Y618 2525 aa10.17□□□□□ -0.78
PTPRK-203ENST00000368207 IGHV3OR16-12A0A075B7B8 117 aa10.17□□□□□ -0.78
PTPRK-203ENST00000368207 K7ENP7 123 aa10.17□□□□□ -0.78
PTPRK-203ENST00000368207 HLA-DQA1P01909 254 aa10.17□□□□□ -0.78
PTPRK-203ENST00000368207 TCTAP57738 103 aa10.17□□□□□ -0.78
PTPRK-203ENST00000368207 SRSF7Q16629 238 aaKnown RBP eCLIP10.17□□□□□ -0.78
PTPRK-203ENST00000368207 CLEC19AQ6UXS0 136 aa10.17□□□□□ -0.78
PTPRK-203ENST00000368207 CARHSP1Q9Y2V2 147 aaKnown RBP10.17□□□□□ -0.78
PTPRK-203ENST00000368207 CSPG4Q6UVK1 2322 aa10.17□□□□□ -0.78
PTPRK-203ENST00000368207 A0A087X0M5 115 aa10.17□□□□□ -0.78
PTPRK-203ENST00000368207 A0A1B0GX30 115 aa10.17□□□□□ -0.78
PTPRK-203ENST00000368207 GRIFINA4D1Z8 144 aa10.17□□□□□ -0.78
PTPRK-203ENST00000368207 RFNGQ9Y644 331 aa10.17□□□□□ -0.78
PTPRK-203ENST00000368207 CA7P43166 264 aa10.17□□□□□ -0.78
PTPRK-203ENST00000368207 PSG9Q00887 426 aa10.17□□□□□ -0.78
PTPRK-203ENST00000368207 HERPUD1Q15011 391 aa10.17□□□□□ -0.78
PTPRK-203ENST00000368207 NMSQ5H8A3 153 aa10.17□□□□□ -0.78
PTPRK-203ENST00000368207 LEMD1Q68G75 181 aa10.17□□□□□ -0.78
PTPRK-203ENST00000368207 VSIRQ9H7M9 311 aa10.17□□□□□ -0.78
PTPRK-203ENST00000368207 LINC00473A8K010 186 aa10.17□□□□□ -0.78
PTPRK-203ENST00000368207 TRGC1P0CF51 173 aa10.17□□□□□ -0.78
PTPRK-203ENST00000368207 CBLN1P23435 193 aa10.17□□□□□ -0.78
PTPRK-203ENST00000368207 CKS2P33552 79 aa10.17□□□□□ -0.78
PTPRK-203ENST00000368207 MAS1LP35410 378 aa10.17□□□□□ -0.78
PTPRK-203ENST00000368207 DLX6P56179 175 aa10.17□□□□□ -0.78
PTPRK-203ENST00000368207 CX3CL1P78423 397 aa10.17□□□□□ -0.78
PTPRK-203ENST00000368207 RELBQ01201 579 aa10.17□□□□□ -0.78
PTPRK-203ENST00000368207 C1orf147Q96MC9 270 aaPredicted RBP10.17□□□□□ -0.78
PTPRK-203ENST00000368207 TRAV3A0A0B4J244 114 aa10.16□□□□□ -0.78
PTPRK-203ENST00000368207 SRIP30626 198 aa10.16□□□□□ -0.78
PTPRK-203ENST00000368207 PRCDQ00LT1 54 aa10.16□□□□□ -0.78
PTPRK-203ENST00000368207 TBX15Q96SF7 602 aa10.16□□□□□ -0.78
PTPRK-203ENST00000368207 GSX1Q9H4S2 264 aaPredicted RBP10.16□□□□□ -0.78
PTPRK-203ENST00000368207 LINC00527Q9UJ94 153 aa10.16□□□□□ -0.78
PTPRK-203ENST00000368207 PLXNB3Q9ULL4 1909 aa10.16□□□□□ -0.78
PTPRK-203ENST00000368207 GPX4P36969 197 aaPredicted RBP10.16□□□□□ -0.78
PTPRK-203ENST00000368207 KLRD1Q13241 179 aa10.16□□□□□ -0.78
PTPRK-203ENST00000368207 ASCL4Q6XD76 172 aa10.16□□□□□ -0.78
PTPRK-203ENST00000368207 DIRC3C9JPN6 131 aa10.16□□□□□ -0.78
PTPRK-203ENST00000368207 IGHV1-8P0DP01 117 aa10.16□□□□□ -0.78
PTPRK-203ENST00000368207 WT1P19544 449 aaPredicted RBP10.16□□□□□ -0.78
PTPRK-203ENST00000368207 G0S2P27469 103 aa10.16□□□□□ -0.78
PTPRK-203ENST00000368207 WDR83OSQ9Y284 106 aa10.16□□□□□ -0.78
PTPRK-203ENST00000368207 FREM1Q5H8C1 2179 aa10.16□□□□□ -0.78
PTPRK-203ENST00000368207 IGHV2-26A0A0B4J1V2 119 aa10.15□□□□□ -0.78
PTPRK-203ENST00000368207 SIAH2O43255 324 aa10.15□□□□□ -0.78
PTPRK-203ENST00000368207 HIST1H1AQ02539 215 aaPredicted RBP10.15□□□□□ -0.78
PTPRK-203ENST00000368207 CD69Q07108 199 aa10.15□□□□□ -0.78
PTPRK-203ENST00000368207 LYPD2Q6UXB3 125 aa10.15□□□□□ -0.78
PTPRK-203ENST00000368207 MYOD1P15172 320 aa10.15□□□□□ -0.78
PTPRK-203ENST00000368207 ZNF841Q6ZN19 808 aa10.15□□□□□ -0.78
PTPRK-203ENST00000368207 PIP4P1Q86T03 277 aa10.15□□□□□ -0.78
PTPRK-203ENST00000368207 TEX45Q8NA69 505 aa10.15□□□□□ -0.78
PTPRK-203ENST00000368207 OR1P1Q8NH06 330 aa10.15□□□□□ -0.78
PTPRK-203ENST00000368207 GAFA1Q96PS6 74 aa10.15□□□□□ -0.78
PTPRK-203ENST00000368207 TRAV40A0A0B4J280 105 aa10.15□□□□□ -0.78
PTPRK-203ENST00000368207 C1QTNF9BB2RNN3 333 aa10.15□□□□□ -0.78
PTPRK-203ENST00000368207 GPX1P07203 203 aa10.15□□□□□ -0.78
PTPRK-203ENST00000368207 ANOS1P23352 680 aa10.15□□□□□ -0.78
PTPRK-203ENST00000368207 RAB9AP51151 201 aa10.15□□□□□ -0.78
PTPRK-203ENST00000368207 PRSS33Q8NF86 280 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms