RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 YTHDF2Q9Y5A9 579 aaKnown RBP10.22□□□□□ -0.77
VAMP4-202ENST00000367740 PUS1Q9Y606 427 aaKnown RBP eCLIP10.22□□□□□ -0.77
VAMP4-202ENST00000367740 LRP1Q07954 4544 aaKnown RBP10.22□□□□□ -0.77
VAMP4-202ENST00000367740 TMEM272A0A1B0GTI8 110 aa10.21□□□□□ -0.77
VAMP4-202ENST00000367740 H3BMM0 161 aa10.21□□□□□ -0.77
VAMP4-202ENST00000367740 FAM229AH3BQW9 127 aa10.21□□□□□ -0.77
VAMP4-202ENST00000367740 GNG7O60262 68 aa10.21□□□□□ -0.77
VAMP4-202ENST00000367740 UCHL1P09936 223 aa10.21□□□□□ -0.77
VAMP4-202ENST00000367740 CCL18P55774 89 aa10.21□□□□□ -0.77
VAMP4-202ENST00000367740 DAD1P61803 113 aa10.21□□□□□ -0.77
VAMP4-202ENST00000367740 C2orf76Q3KRA6 126 aa10.21□□□□□ -0.77
VAMP4-202ENST00000367740 TTC32Q5I0X7 151 aa10.21□□□□□ -0.77
VAMP4-202ENST00000367740 GSG1LQ6UXU4 331 aa10.21□□□□□ -0.77
VAMP4-202ENST00000367740 DMBX1Q8NFW5 382 aa10.21□□□□□ -0.77
VAMP4-202ENST00000367740 OR10R2Q8NGX6 335 aa10.21□□□□□ -0.77
VAMP4-202ENST00000367740 OR1P1Q8NH06 330 aa10.21□□□□□ -0.77
VAMP4-202ENST00000367740 PYDC1Q8WXC3 89 aa10.21□□□□□ -0.77
VAMP4-202ENST00000367740 Q9H3A6 140 aa10.21□□□□□ -0.77
VAMP4-202ENST00000367740 ELF5Q9UKW6 265 aaPredicted RBP10.21□□□□□ -0.77
VAMP4-202ENST00000367740 A0A1B0GU03 582 aa10.2□□□□□ -0.78
VAMP4-202ENST00000367740 RPS10-NUDT3A0A1W2PQS6 291 aa10.2□□□□□ -0.78
VAMP4-202ENST00000367740 HELTA6NFD8 242 aa10.2□□□□□ -0.78
VAMP4-202ENST00000367740 SULT1C2O00338 296 aa10.2□□□□□ -0.78
VAMP4-202ENST00000367740 NUDT3O95989 172 aa10.2□□□□□ -0.78
VAMP4-202ENST00000367740 HPRT1P00492 218 aa10.2□□□□□ -0.78
VAMP4-202ENST00000367740 TALDO1P37837 337 aa10.2□□□□□ -0.78
VAMP4-202ENST00000367740 P2RY1P47900 373 aa10.2□□□□□ -0.78
VAMP4-202ENST00000367740 KRTAP10-1P60331 282 aa10.2□□□□□ -0.78
VAMP4-202ENST00000367740 ST3GAL4Q11206 333 aa10.2□□□□□ -0.78
VAMP4-202ENST00000367740 MS4A15Q8N5U1 240 aa10.2□□□□□ -0.78
VAMP4-202ENST00000367740 MISP3Q96FF7 219 aa10.2□□□□□ -0.78
VAMP4-202ENST00000367740 Q9H8V8 135 aa10.2□□□□□ -0.78
VAMP4-202ENST00000367740 AK6Q9Y3D8 172 aaKnown RBP10.2□□□□□ -0.78
VAMP4-202ENST00000367740 MYL12BO14950 172 aa10.19□□□□□ -0.78
VAMP4-202ENST00000367740 MT-CO2P00403 227 aa10.19□□□□□ -0.78
VAMP4-202ENST00000367740 CTXN2P0C2S0 81 aa10.19□□□□□ -0.78
VAMP4-202ENST00000367740 DTYMKP23919 212 aa10.19□□□□□ -0.78
VAMP4-202ENST00000367740 GNRHRP30968 328 aa10.19□□□□□ -0.78
VAMP4-202ENST00000367740 ICAM4Q14773 271 aa10.19□□□□□ -0.78
VAMP4-202ENST00000367740 OGFRL1Q5TC84 451 aaPredicted RBP10.19□□□□□ -0.78
VAMP4-202ENST00000367740 CDPF1Q6NVV7 123 aa10.19□□□□□ -0.78
VAMP4-202ENST00000367740 ZNF600Q6ZNG1 722 aa10.19□□□□□ -0.78
VAMP4-202ENST00000367740 SSX7Q7RTT5 188 aa10.19□□□□□ -0.78
VAMP4-202ENST00000367740 PLA2G2DQ9UNK4 145 aa10.19□□□□□ -0.78
VAMP4-202ENST00000367740 RNF213Q63HN8 5207 aa10.18□□□□□ -0.78
VAMP4-202ENST00000367740 LOC102723971A0A1B0GUV8 181 aa10.18□□□□□ -0.78
VAMP4-202ENST00000367740 A0A1W2PS18 150 aa10.18□□□□□ -0.78
VAMP4-202ENST00000367740 GADD45AP24522 165 aa10.18□□□□□ -0.78
VAMP4-202ENST00000367740 ALDH3B2P48448 385 aa10.18□□□□□ -0.78
VAMP4-202ENST00000367740 DHRS2Q13268 280 aa10.18□□□□□ -0.78
VAMP4-202ENST00000367740 CCL28Q9NRJ3 127 aa10.18□□□□□ -0.78
VAMP4-202ENST00000367740 RAB22AQ9UL26 194 aa10.18□□□□□ -0.78
VAMP4-202ENST00000367740 HLA-DRB4P13762 266 aa10.17□□□□□ -0.78
VAMP4-202ENST00000367740 NPPCP23582 126 aa10.17□□□□□ -0.78
VAMP4-202ENST00000367740 CRYBB3P26998 211 aa10.17□□□□□ -0.78
VAMP4-202ENST00000367740 FXYD7P58549 80 aa10.17□□□□□ -0.78
VAMP4-202ENST00000367740 HAMPP81172 84 aa10.17□□□□□ -0.78
VAMP4-202ENST00000367740 MSMO1Q15800 293 aa10.17□□□□□ -0.78
VAMP4-202ENST00000367740 KCTD21Q4G0X4 260 aa10.17□□□□□ -0.78
VAMP4-202ENST00000367740 Q6ZRN7 208 aaPredicted RBP10.17□□□□□ -0.78
VAMP4-202ENST00000367740 SECTM1Q8WVN6 248 aa10.17□□□□□ -0.78
VAMP4-202ENST00000367740 PLEKHA2Q9HB19 425 aa10.17□□□□□ -0.78
VAMP4-202ENST00000367740 COMMD9Q9P000 198 aa10.17□□□□□ -0.78
VAMP4-202ENST00000367740 NSG2Q9Y328 171 aa10.17□□□□□ -0.78
VAMP4-202ENST00000367740 OR51B2Q9Y5P1 312 aa10.17□□□□□ -0.78
VAMP4-202ENST00000367740 HLA-DRB4X5D2U9 266 aa10.17□□□□□ -0.78
VAMP4-202ENST00000367740 MARCH11A6NNE9 402 aa10.16□□□□□ -0.78
VAMP4-202ENST00000367740 USF2Q15853 346 aaPredicted RBP10.16□□□□□ -0.78
VAMP4-202ENST00000367740 CNIH2Q6PI25 160 aa10.16□□□□□ -0.78
VAMP4-202ENST00000367740 Q8N3U1 123 aa10.16□□□□□ -0.78
VAMP4-202ENST00000367740 NANOGP1Q8N7R0 232 aa10.16□□□□□ -0.78
VAMP4-202ENST00000367740 PINX1Q96BK5 328 aaKnown RBP10.16□□□□□ -0.78
VAMP4-202ENST00000367740 MOB3AQ96BX8 217 aa10.16□□□□□ -0.78
VAMP4-202ENST00000367740 A0A1W2PPQ1 181 aa10.15□□□□□ -0.78
VAMP4-202ENST00000367740 DBX1A6NMT0 343 aa10.15□□□□□ -0.78
VAMP4-202ENST00000367740 FAM90A26D6RGX4 464 aa10.15□□□□□ -0.78
VAMP4-202ENST00000367740 HBE1P02100 147 aa10.15□□□□□ -0.78
VAMP4-202ENST00000367740 PPP5CP53041 499 aa10.15□□□□□ -0.78
VAMP4-202ENST00000367740 CATR1Q13166 79 aa10.15□□□□□ -0.78
VAMP4-202ENST00000367740 GDF5OSQ5U4N7 250 aa10.15□□□□□ -0.78
VAMP4-202ENST00000367740 ZNF709Q8N972 641 aa10.15□□□□□ -0.78
VAMP4-202ENST00000367740 RNF141Q8WVD5 230 aa10.15□□□□□ -0.78
VAMP4-202ENST00000367740 TMEM56Q96MV1 263 aa10.15□□□□□ -0.78
VAMP4-202ENST00000367740 METTL26Q96S19 204 aa10.15□□□□□ -0.78
VAMP4-202ENST00000367740 FAT3Q8TDW7 4589 aa10.14□□□□□ -0.79
VAMP4-202ENST00000367740 IGKV3-20P01619 116 aa10.14□□□□□ -0.79
VAMP4-202ENST00000367740 LINC00315P59091 139 aa10.14□□□□□ -0.79
VAMP4-202ENST00000367740 HES5Q5TA89 166 aa10.14□□□□□ -0.79
VAMP4-202ENST00000367740 C1orf158Q8N1D5 194 aa10.14□□□□□ -0.79
VAMP4-202ENST00000367740 ZNF114Q8NC26 417 aa10.14□□□□□ -0.79
VAMP4-202ENST00000367740 OR13F1Q8NGS4 319 aa10.14□□□□□ -0.79
VAMP4-202ENST00000367740 OR51H1Q8NH63 302 aa10.14□□□□□ -0.79
VAMP4-202ENST00000367740 C9orf16Q9BUW7 83 aa10.14□□□□□ -0.79
VAMP4-202ENST00000367740 ZNF586Q9NXT0 402 aa10.14□□□□□ -0.79
VAMP4-202ENST00000367740 ERICH4A6NGS2 130 aa10.13□□□□□ -0.79
VAMP4-202ENST00000367740 F5H768 121 aa10.13□□□□□ -0.79
VAMP4-202ENST00000367740 NPBWR1P48145 328 aa10.13□□□□□ -0.79
VAMP4-202ENST00000367740 DEFB1P60022 68 aa10.13□□□□□ -0.79
VAMP4-202ENST00000367740 ERVK-16P61578 105 aa10.13□□□□□ -0.79
VAMP4-202ENST00000367740 SNRPD3P62318 126 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms