RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 CHEK1O14757 476 aa11□□□□□ -0.65
CTSD-202ENST00000367196 HPGDSO60760 199 aa11□□□□□ -0.65
CTSD-202ENST00000367196 MT-CO2P00403 227 aa11□□□□□ -0.65
CTSD-202ENST00000367196 PGAM2P15259 253 aa11□□□□□ -0.65
CTSD-202ENST00000367196 ELK1P19419 428 aa11□□□□□ -0.65
CTSD-202ENST00000367196 SNCAP37840 140 aa11□□□□□ -0.65
CTSD-202ENST00000367196 NPBWR1P48145 328 aa11□□□□□ -0.65
CTSD-202ENST00000367196 AKR1C2P52895 323 aa11□□□□□ -0.65
CTSD-202ENST00000367196 SUB1P53999 127 aaKnown RBP eCLIP11□□□□□ -0.65
CTSD-202ENST00000367196 PMS2P11Q13670 270 aa11□□□□□ -0.65
CTSD-202ENST00000367196 SLC35G3Q8N808 338 aa11□□□□□ -0.65
CTSD-202ENST00000367196 RNF183Q96D59 192 aa11□□□□□ -0.65
CTSD-202ENST00000367196 RNF2Q99496 336 aa11□□□□□ -0.65
CTSD-202ENST00000367196 IGKV1-39P01597 117 aa10.99□□□□□ -0.65
CTSD-202ENST00000367196 IGKV1D-39P04432 117 aa10.99□□□□□ -0.65
CTSD-202ENST00000367196 CCDC71LQ8N9Z2 235 aa10.99□□□□□ -0.65
CTSD-202ENST00000367196 DUSP18Q8NEJ0 188 aa10.99□□□□□ -0.65
CTSD-202ENST00000367196 TMEM231Q9H6L2 316 aa10.99□□□□□ -0.65
CTSD-202ENST00000367196 MAP6D1Q9H9H5 199 aa10.99□□□□□ -0.65
CTSD-202ENST00000367196 KLK5Q9Y337 293 aaPredicted RBP10.99□□□□□ -0.65
CTSD-202ENST00000367196 INS-IGF2F8WCM5 200 aa10.98□□□□□ -0.65
CTSD-202ENST00000367196 M0QYG6 137 aa10.98□□□□□ -0.65
CTSD-202ENST00000367196 B3GALNT1O75752 331 aa10.98□□□□□ -0.65
CTSD-202ENST00000367196 IFNA17P01571 189 aa10.98□□□□□ -0.65
CTSD-202ENST00000367196 RPL35AP18077 110 aaKnown RBP10.98□□□□□ -0.65
CTSD-202ENST00000367196 PIGPP57054 158 aa10.98□□□□□ -0.65
CTSD-202ENST00000367196 ZFAND1Q8TCF1 268 aa10.98□□□□□ -0.65
CTSD-202ENST00000367196 LINC00476Q8WZB0 136 aa10.98□□□□□ -0.65
CTSD-202ENST00000367196 ENY2Q9NPA8 101 aa10.98□□□□□ -0.65
CTSD-202ENST00000367196 COPZ2Q9P299 210 aa10.98□□□□□ -0.65
CTSD-202ENST00000367196 C3orf85A0A1B0GTC6 90 aa10.97□□□□□ -0.65
CTSD-202ENST00000367196 MPTX1A8MV57 137 aa10.97□□□□□ -0.65
CTSD-202ENST00000367196 LHFPL1Q86WI0 220 aa10.97□□□□□ -0.65
CTSD-202ENST00000367196 RNASE11Q8TAA1 199 aaKnown RBP10.97□□□□□ -0.65
CTSD-202ENST00000367196 GATAD1Q8WUU5 269 aa10.97□□□□□ -0.65
CTSD-202ENST00000367196 RRNAD1Q96FB5 475 aaKnown RBP10.97□□□□□ -0.65
CTSD-202ENST00000367196 CSTL1Q9H114 145 aa10.97□□□□□ -0.65
CTSD-202ENST00000367196 EXTL2Q9UBQ6 330 aa10.97□□□□□ -0.65
CTSD-202ENST00000367196 ALMS1Q8TCU4 4167 aa10.96□□□□□ -0.65
CTSD-202ENST00000367196 ZNF182P17025 639 aaPredicted RBP10.96□□□□□ -0.65
CTSD-202ENST00000367196 TFPI2P48307 235 aa10.96□□□□□ -0.65
CTSD-202ENST00000367196 HOXA1P49639 335 aaPredicted RBP10.96□□□□□ -0.65
CTSD-202ENST00000367196 TAS2R19P59542 299 aa10.96□□□□□ -0.65
CTSD-202ENST00000367196 TRIM16LQ309B1 348 aa10.96□□□□□ -0.65
CTSD-202ENST00000367196 CEMP1Q6PRD7 247 aaPredicted RBP10.96□□□□□ -0.65
CTSD-202ENST00000367196 ZNF600Q6ZNG1 722 aa10.96□□□□□ -0.65
CTSD-202ENST00000367196 APRG1Q8IVJ8 170 aa10.96□□□□□ -0.65
CTSD-202ENST00000367196 KLK11Q9UBX7 282 aa10.96□□□□□ -0.65
CTSD-202ENST00000367196 MTFP1Q9UDX5 166 aa10.96□□□□□ -0.65
CTSD-202ENST00000367196 EPPK1P58107 5090 aaKnown RBP10.96□□□□□ -0.66
CTSD-202ENST00000367196 IGKV3-7A0A075B6H7 116 aa10.95□□□□□ -0.66
CTSD-202ENST00000367196 IGHV3-49A0A0A0MS15 119 aa10.95□□□□□ -0.66
CTSD-202ENST00000367196 TRAV2A0A0B4J234 112 aa10.95□□□□□ -0.66
CTSD-202ENST00000367196 A0A1W2PS18 150 aa10.95□□□□□ -0.66
CTSD-202ENST00000367196 DNASE2O00115 360 aaPredicted RBP10.95□□□□□ -0.66
CTSD-202ENST00000367196 ST8SIA3O43173 380 aa10.95□□□□□ -0.66
CTSD-202ENST00000367196 DFFBO76075 338 aa10.95□□□□□ -0.66
CTSD-202ENST00000367196 GABARAPO95166 117 aa10.95□□□□□ -0.66
CTSD-202ENST00000367196 LY6G6CO95867 125 aa10.95□□□□□ -0.66
CTSD-202ENST00000367196 IGKV1-5P01602 117 aa10.95□□□□□ -0.66
CTSD-202ENST00000367196 CD3DP04234 171 aa10.95□□□□□ -0.66
CTSD-202ENST00000367196 PPP5CP53041 499 aa10.95□□□□□ -0.66
CTSD-202ENST00000367196 MRPS10P82664 201 aaKnown RBP10.95□□□□□ -0.66
CTSD-202ENST00000367196 RNASE12Q5GAN4 147 aaKnown RBP10.95□□□□□ -0.66
CTSD-202ENST00000367196 FAM90A2PQ658T7 463 aa10.95□□□□□ -0.66
CTSD-202ENST00000367196 TCF24Q7RTU0 167 aa10.95□□□□□ -0.66
CTSD-202ENST00000367196 OR52I2Q8NH67 350 aa10.95□□□□□ -0.66
CTSD-202ENST00000367196 TERB2Q8NHR7 220 aa10.95□□□□□ -0.66
CTSD-202ENST00000367196 NARS2Q96I59 477 aaKnown RBP10.95□□□□□ -0.66
CTSD-202ENST00000367196 TP53RKQ96S44 253 aa10.95□□□□□ -0.66
CTSD-202ENST00000367196 IGHV3-48P01763 117 aa10.94□□□□□ -0.66
CTSD-202ENST00000367196 PI3P19957 117 aa10.94□□□□□ -0.66
CTSD-202ENST00000367196 OPRK1P41145 380 aa10.94□□□□□ -0.66
CTSD-202ENST00000367196 SSBP1Q04837 148 aaKnown RBP10.94□□□□□ -0.66
CTSD-202ENST00000367196 SCGB2B2Q4G0G5 96 aa10.94□□□□□ -0.66
CTSD-202ENST00000367196 SPINK9Q5DT21 86 aa10.94□□□□□ -0.66
CTSD-202ENST00000367196 TOMM20LQ6UXN7 152 aa10.94□□□□□ -0.66
CTSD-202ENST00000367196 FAM219AQ8IW50 185 aa10.94□□□□□ -0.66
CTSD-202ENST00000367196 TMEM229BQ8NBD8 167 aa10.94□□□□□ -0.66
CTSD-202ENST00000367196 MFFQ9GZY8 342 aa10.94□□□□□ -0.66
CTSD-202ENST00000367196 VSIRQ9H7M9 311 aa10.94□□□□□ -0.66
CTSD-202ENST00000367196 PUS1Q9Y606 427 aaKnown RBP eCLIP10.94□□□□□ -0.66
CTSD-202ENST00000367196 HYDINQ4G0P3 5121 aa10.93□□□□□ -0.66
CTSD-202ENST00000367196 IGHV3OR16-13A0A075B7E8 117 aa10.93□□□□□ -0.66
CTSD-202ENST00000367196 IGHV3-74A0A0B4J1X5 117 aa10.93□□□□□ -0.66
CTSD-202ENST00000367196 A0A0B4J293 547 aa10.93□□□□□ -0.66
CTSD-202ENST00000367196 RAB3DO95716 219 aa10.93□□□□□ -0.66
CTSD-202ENST00000367196 CD74P04233 296 aa10.93□□□□□ -0.66
CTSD-202ENST00000367196 P0C879 139 aa10.93□□□□□ -0.66
CTSD-202ENST00000367196 UCP1P25874 307 aa10.93□□□□□ -0.66
CTSD-202ENST00000367196 RPL11P62913 178 aaKnown RBP10.93□□□□□ -0.66
CTSD-202ENST00000367196 MEF2DQ14814 521 aa10.93□□□□□ -0.66
CTSD-202ENST00000367196 CTF1Q16619 201 aa10.93□□□□□ -0.66
CTSD-202ENST00000367196 IZUMO4Q1ZYL8 232 aa10.93□□□□□ -0.66
CTSD-202ENST00000367196 PVRIGQ6DKI7 326 aa10.93□□□□□ -0.66
CTSD-202ENST00000367196 GBGT1Q8N5D6 347 aa10.93□□□□□ -0.66
CTSD-202ENST00000367196 ST8SIA2Q92186 375 aa10.93□□□□□ -0.66
CTSD-202ENST00000367196 ZNF414Q96IQ9 312 aa10.93□□□□□ -0.66
CTSD-202ENST00000367196 METTL26Q96S19 204 aa10.93□□□□□ -0.66
CTSD-202ENST00000367196 RARRES2Q99969 163 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms