RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 DCUN1D5Q9BTE7 237 aa6□□□□□ -1.45
HMGB1P39-201ENST00000366304 PECRQ9BY49 303 aa6□□□□□ -1.45
HMGB1P39-201ENST00000366304 CCDC59Q9P031 241 aaKnown RBP6□□□□□ -1.45
HMGB1P39-201ENST00000366304 MDFICQ9P1T7 246 aa6□□□□□ -1.45
HMGB1P39-201ENST00000366304 GHRLQ9UBU3 117 aa6□□□□□ -1.45
HMGB1P39-201ENST00000366304 TBC1D24Q9ULP9 559 aa6□□□□□ -1.45
HMGB1P39-201ENST00000366304 NBDYA0A0U1RRE5 68 aa5.99□□□□□ -1.45
HMGB1P39-201ENST00000366304 LINC00862A6NCI5 91 aa5.99□□□□□ -1.45
HMGB1P39-201ENST00000366304 C15orf62A8K5M9 175 aa5.99□□□□□ -1.45
HMGB1P39-201ENST00000366304 J3QRK9 145 aa5.99□□□□□ -1.45
HMGB1P39-201ENST00000366304 CREBL2O60519 120 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P39-201ENST00000366304 CTSGP08311 255 aa5.99□□□□□ -1.45
HMGB1P39-201ENST00000366304 UBBP0CG47 229 aa5.99□□□□□ -1.45
HMGB1P39-201ENST00000366304 CD37P11049 281 aa5.99□□□□□ -1.45
HMGB1P39-201ENST00000366304 RAB14P61106 215 aa5.99□□□□□ -1.45
HMGB1P39-201ENST00000366304 TPBGQ13641 420 aa5.99□□□□□ -1.45
HMGB1P39-201ENST00000366304 ZFP69Q49AA0 526 aa5.99□□□□□ -1.45
HMGB1P39-201ENST00000366304 H1FOOQ8IZA3 346 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P39-201ENST00000366304 NKAIN3Q8N8D7 197 aa5.99□□□□□ -1.45
HMGB1P39-201ENST00000366304 OR10J5Q8NHC4 309 aa5.99□□□□□ -1.45
HMGB1P39-201ENST00000366304 ZNRF2Q8NHG8 242 aa5.99□□□□□ -1.45
HMGB1P39-201ENST00000366304 Q96MT0 163 aa5.99□□□□□ -1.45
HMGB1P39-201ENST00000366304 GFI1Q99684 422 aa5.99□□□□□ -1.45
HMGB1P39-201ENST00000366304 CMSS1Q9BQ75 279 aaKnown RBP5.99□□□□□ -1.45
HMGB1P39-201ENST00000366304 KRTAP1-5Q9BYS1 174 aa5.99□□□□□ -1.45
HMGB1P39-201ENST00000366304 MS4A6AQ9H2W1 248 aa5.99□□□□□ -1.45
HMGB1P39-201ENST00000366304 HSF4Q9ULV5 492 aa5.99□□□□□ -1.45
HMGB1P39-201ENST00000366304 MGAT4AQ9UM21 535 aa5.99□□□□□ -1.45
HMGB1P39-201ENST00000366304 DIMT1Q9UNQ2 313 aaKnown RBP5.99□□□□□ -1.45
HMGB1P39-201ENST00000366304 TRAV6A0A075B6T7 132 aa5.98□□□□□ -1.45
HMGB1P39-201ENST00000366304 IGKV1D-13A0A0B4J2D9 117 aa5.98□□□□□ -1.45
HMGB1P39-201ENST00000366304 K7EIM0 57 aa5.98□□□□□ -1.45
HMGB1P39-201ENST00000366304 NUPL2O15504 423 aaKnown RBP5.98□□□□□ -1.45
HMGB1P39-201ENST00000366304 DHFRP00374 187 aa5.98□□□□□ -1.45
HMGB1P39-201ENST00000366304 FCGR3AP08637 254 aa5.98□□□□□ -1.45
HMGB1P39-201ENST00000366304 GNAO1P09471 354 aa5.98□□□□□ -1.45
HMGB1P39-201ENST00000366304 IGKV1-13P0DP09 117 aa5.98□□□□□ -1.45
HMGB1P39-201ENST00000366304 HLA-GP17693 338 aa5.98□□□□□ -1.45
HMGB1P39-201ENST00000366304 CRHBPP24387 322 aa5.98□□□□□ -1.45
HMGB1P39-201ENST00000366304 MAS1LP35410 378 aa5.98□□□□□ -1.45
HMGB1P39-201ENST00000366304 CMC4P56277 68 aaPredicted RBP5.98□□□□□ -1.45
HMGB1P39-201ENST00000366304 RPL8P62917 257 aaKnown RBP5.98□□□□□ -1.45
HMGB1P39-201ENST00000366304 WT1-ASQ06250 92 aa5.98□□□□□ -1.45
HMGB1P39-201ENST00000366304 P2RY14Q15391 338 aa5.98□□□□□ -1.45
HMGB1P39-201ENST00000366304 TMPRSS11AQ6ZMR5 421 aa5.98□□□□□ -1.45
HMGB1P39-201ENST00000366304 KCTD9Q7L273 389 aa5.98□□□□□ -1.45
HMGB1P39-201ENST00000366304 TCF24Q7RTU0 167 aa5.98□□□□□ -1.45
HMGB1P39-201ENST00000366304 C8orf59Q8N0T1 100 aaPredicted RBP5.98□□□□□ -1.45
HMGB1P39-201ENST00000366304 OR13F1Q8NGS4 319 aa5.98□□□□□ -1.45
HMGB1P39-201ENST00000366304 SVIPQ8NHG7 77 aa5.98□□□□□ -1.45
HMGB1P39-201ENST00000366304 VN1R17PQ8TDU5 208 aa5.98□□□□□ -1.45
HMGB1P39-201ENST00000366304 SCARB1Q8WTV0 552 aa5.98□□□□□ -1.45
HMGB1P39-201ENST00000366304 ST8SIA2Q92186 375 aa5.98□□□□□ -1.45
HMGB1P39-201ENST00000366304 BSCL2Q96G97 398 aaPredicted RBP5.98□□□□□ -1.45
HMGB1P39-201ENST00000366304 OR10C1Q96KK4 312 aa5.98□□□□□ -1.45
HMGB1P39-201ENST00000366304 IGHV3-66A0A0C4DH42 116 aa5.97□□□□□ -1.45
HMGB1P39-201ENST00000366304 DFFBO76075 338 aa5.97□□□□□ -1.45
HMGB1P39-201ENST00000366304 HOXA5P20719 270 aa5.97□□□□□ -1.45
HMGB1P39-201ENST00000366304 FLI1Q01543 452 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P39-201ENST00000366304 GPR107Q5VW38 600 aa5.97□□□□□ -1.45
HMGB1P39-201ENST00000366304 TMEM88Q6PEY1 159 aa5.97□□□□□ -1.45
HMGB1P39-201ENST00000366304 PRSS48Q7RTY5 328 aa5.97□□□□□ -1.45
HMGB1P39-201ENST00000366304 STHQ8IWL8 128 aa5.97□□□□□ -1.45
HMGB1P39-201ENST00000366304 ZNF680Q8NEM1 530 aa5.97□□□□□ -1.45
HMGB1P39-201ENST00000366304 OR5H6Q8NGV6 325 aa5.97□□□□□ -1.45
HMGB1P39-201ENST00000366304 TMEM14BQ9NUH8 114 aa5.97□□□□□ -1.45
HMGB1P39-201ENST00000366304 EXTL2Q9UBQ6 330 aa5.97□□□□□ -1.45
HMGB1P39-201ENST00000366304 IRGMA1A4Y4 181 aa5.96□□□□□ -1.46
HMGB1P39-201ENST00000366304 ZNF98A6NK75 572 aa5.96□□□□□ -1.46
HMGB1P39-201ENST00000366304 KRTAP9-7A8MTY7 169 aa5.96□□□□□ -1.46
HMGB1P39-201ENST00000366304 SPP1P10451 314 aa5.96□□□□□ -1.46
HMGB1P39-201ENST00000366304 EMP1P54849 157 aa5.96□□□□□ -1.46
HMGB1P39-201ENST00000366304 TIMM50Q3ZCQ8 353 aa5.96□□□□□ -1.46
HMGB1P39-201ENST00000366304 RBM48Q5RL73 367 aaKnown RBP5.96□□□□□ -1.46
HMGB1P39-201ENST00000366304 PXDC1Q5TGL8 231 aa5.96□□□□□ -1.46
HMGB1P39-201ENST00000366304 UBE2UQ5VVX9 321 aa5.96□□□□□ -1.46
HMGB1P39-201ENST00000366304 SPSB3Q6PJ21 355 aa5.96□□□□□ -1.46
HMGB1P39-201ENST00000366304 NOXA1Q86UR1 476 aa5.96□□□□□ -1.46
HMGB1P39-201ENST00000366304 UBAC2Q8NBM4 344 aa5.96□□□□□ -1.46
HMGB1P39-201ENST00000366304 OR6F1Q8NGZ6 308 aa5.96□□□□□ -1.46
HMGB1P39-201ENST00000366304 FAM210BQ96KR6 192 aa5.96□□□□□ -1.46
HMGB1P39-201ENST00000366304 VSIRQ9H7M9 311 aa5.96□□□□□ -1.46
HMGB1P39-201ENST00000366304 C21orf62Q9NYP8 219 aa5.96□□□□□ -1.46
HMGB1P39-201ENST00000366304 ELF5Q9UKW6 265 aaPredicted RBP5.96□□□□□ -1.46
HMGB1P39-201ENST00000366304 CBY1Q9Y3M2 126 aa5.96□□□□□ -1.46
HMGB1P39-201ENST00000366304 RBM7Q9Y580 266 aaKnown RBP5.96□□□□□ -1.46
HMGB1P39-201ENST00000366304 K7EQG2 157 aa5.95□□□□□ -1.46
HMGB1P39-201ENST00000366304 SSX5O60225 188 aa5.95□□□□□ -1.46
HMGB1P39-201ENST00000366304 UPK1BO75841 260 aa5.95□□□□□ -1.46
HMGB1P39-201ENST00000366304 SMR3BP02814 79 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P39-201ENST00000366304 CDK1P06493 297 aa5.95□□□□□ -1.46
HMGB1P39-201ENST00000366304 OR13C7P0DN81 318 aa5.95□□□□□ -1.46
HMGB1P39-201ENST00000366304 HTN3P15516 51 aa5.95□□□□□ -1.46
HMGB1P39-201ENST00000366304 NPY1RP25929 384 aa5.95□□□□□ -1.46
HMGB1P39-201ENST00000366304 CLDN12P56749 244 aa5.95□□□□□ -1.46
HMGB1P39-201ENST00000366304 ACTL10Q5JWF8 245 aa5.95□□□□□ -1.46
HMGB1P39-201ENST00000366304 HES5Q5TA89 166 aa5.95□□□□□ -1.46
HMGB1P39-201ENST00000366304 LIPKQ5VXJ0 399 aa5.95□□□□□ -1.46
HMGB1P39-201ENST00000366304 LAIR2Q6ISS4 152 aa5.95□□□□□ -1.46
HMGB1P39-201ENST00000366304 SLC25A24Q6NUK1 477 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms