RNA–Protein interactions for RNA: ENST00000362093.4

CKLF-204, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 412 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-204ENST00000362093 FOLR2P14207 255 aa12.82□□□□□ -0.36
CKLF-204ENST00000362093 EDN2P20800 178 aa12.82□□□□□ -0.36
CKLF-204ENST00000362093 SNCAP37840 140 aa12.82□□□□□ -0.36
CKLF-204ENST00000362093 CCR6P51684 374 aa12.82□□□□□ -0.36
CKLF-204ENST00000362093 SRPXP78539 464 aa12.82□□□□□ -0.36
CKLF-204ENST00000362093 RBMS2Q15434 407 aaKnown RBP12.82□□□□□ -0.36
CKLF-204ENST00000362093 NMSQ5H8A3 153 aa12.82□□□□□ -0.36
CKLF-204ENST00000362093 SPSB3Q6PJ21 355 aa12.82□□□□□ -0.36
CKLF-204ENST00000362093 UNQ9165/PRO28630Q6UXU0 137 aa12.82□□□□□ -0.36
CKLF-204ENST00000362093 LYZL2Q7Z4W2 148 aa12.82□□□□□ -0.36
CKLF-204ENST00000362093 ZNF320A2RRD8 509 aa12.81□□□□□ -0.36
CKLF-204ENST00000362093 A8MWP6 167 aa12.81□□□□□ -0.36
CKLF-204ENST00000362093 NDUFB6O95139 128 aa12.81□□□□□ -0.36
CKLF-204ENST00000362093 MT-CO2P00403 227 aa12.81□□□□□ -0.36
CKLF-204ENST00000362093 FCGR2BP31994 310 aaPredicted RBP12.81□□□□□ -0.36
CKLF-204ENST00000362093 ADMP35318 185 aa12.81□□□□□ -0.36
CKLF-204ENST00000362093 DEFB114Q30KQ6 69 aa12.81□□□□□ -0.36
CKLF-204ENST00000362093 BSXQ3C1V8 233 aa12.81□□□□□ -0.36
CKLF-204ENST00000362093 LINC00299Q6ZSB3 139 aa12.81□□□□□ -0.36
CKLF-204ENST00000362093 LRTM2Q8N967 370 aa12.81□□□□□ -0.36
CKLF-204ENST00000362093 OR2K2Q8NGT1 345 aa12.81□□□□□ -0.36
CKLF-204ENST00000362093 TXN2Q99757 166 aa12.81□□□□□ -0.36
CKLF-204ENST00000362093 B9D2Q9BPU9 175 aa12.81□□□□□ -0.36
CKLF-204ENST00000362093 CHRDL1Q9BU40 450 aa12.81□□□□□ -0.36
CKLF-204ENST00000362093 ENY2Q9NPA8 101 aa12.81□□□□□ -0.36
CKLF-204ENST00000362093 CACFD1Q9UGQ2 172 aa12.81□□□□□ -0.36
CKLF-204ENST00000362093 IGHV3-35A0A0C4DH35 117 aa12.8□□□□□ -0.36
CKLF-204ENST00000362093 LINC00854A0A1B0GVQ3 168 aa12.8□□□□□ -0.36
CKLF-204ENST00000362093 TMEM213A2RRL7 107 aa12.8□□□□□ -0.36
CKLF-204ENST00000362093 IZUMO1RA6ND01 250 aa12.8□□□□□ -0.36
CKLF-204ENST00000362093 SFT2D2O95562 160 aa12.8□□□□□ -0.36
CKLF-204ENST00000362093 CTSGP08311 255 aa12.8□□□□□ -0.36
CKLF-204ENST00000362093 SULT1A3P0DMM9 295 aa12.8□□□□□ -0.36
CKLF-204ENST00000362093 SULT1A4P0DMN0 295 aa12.8□□□□□ -0.36
CKLF-204ENST00000362093 CBLN1P23435 193 aa12.8□□□□□ -0.36
CKLF-204ENST00000362093 BTCP35070 178 aa12.8□□□□□ -0.36
CKLF-204ENST00000362093 HOXA1P49639 335 aaPredicted RBP12.8□□□□□ -0.36
CKLF-204ENST00000362093 SUB1P53999 127 aaKnown RBP eCLIP12.8□□□□□ -0.36
CKLF-204ENST00000362093 MFAP4P55083 255 aa12.8□□□□□ -0.36
CKLF-204ENST00000362093 CNPY1Q3B7I2 92 aa12.8□□□□□ -0.36
CKLF-204ENST00000362093 TM4SF20Q53R12 229 aa12.8□□□□□ -0.36
CKLF-204ENST00000362093 Q8N1Y9 231 aa12.8□□□□□ -0.36
CKLF-204ENST00000362093 CENPSQ8N2Z9 138 aa12.8□□□□□ -0.36
CKLF-204ENST00000362093 ZNF414Q96IQ9 312 aa12.8□□□□□ -0.36
CKLF-204ENST00000362093 C7orf50Q9BRJ6 194 aaKnown RBP12.8□□□□□ -0.36
CKLF-204ENST00000362093 GAR1Q9NY12 217 aaKnown RBP12.8□□□□□ -0.36
CKLF-204ENST00000362093 SMAD5-AS1Q9Y6J3 95 aa12.8□□□□□ -0.36
CKLF-204ENST00000362093 PIGBOS1A0A0B4J2F0 54 aa12.79□□□□□ -0.36
CKLF-204ENST00000362093 DUXBA0A1W2PPF3 345 aa12.79□□□□□ -0.36
CKLF-204ENST00000362093 C8orf88P0DMB2 117 aa12.79□□□□□ -0.36
CKLF-204ENST00000362093 ELLP55199 621 aaPredicted RBP12.79□□□□□ -0.36
CKLF-204ENST00000362093 PPP1R1AQ13522 171 aa12.79□□□□□ -0.36
CKLF-204ENST00000362093 SMCO1Q147U7 214 aa12.79□□□□□ -0.36
CKLF-204ENST00000362093 ANKRD55Q3KP44 614 aa12.79□□□□□ -0.36
CKLF-204ENST00000362093 CD300EQ496F6 205 aaPredicted RBP12.79□□□□□ -0.36
CKLF-204ENST00000362093 Q56UQ5 140 aa12.79□□□□□ -0.36
CKLF-204ENST00000362093 LCN12Q6JVE5 192 aa12.79□□□□□ -0.36
CKLF-204ENST00000362093 UBAC2Q8NBM4 344 aa12.79□□□□□ -0.36
CKLF-204ENST00000362093 PINX1Q96BK5 328 aaKnown RBP12.79□□□□□ -0.36
CKLF-204ENST00000362093 PALMDQ9NP74 551 aa12.79□□□□□ -0.36
CKLF-204ENST00000362093 TECRQ9NZ01 308 aaKnown RBP12.79□□□□□ -0.36
CKLF-204ENST00000362093 A0A1B0GU03 582 aa12.78□□□□□ -0.36
CKLF-204ENST00000362093 ZNF785A8K8V0 405 aa12.78□□□□□ -0.36
CKLF-204ENST00000362093 CENPXA8MT69 81 aa12.78□□□□□ -0.36
CKLF-204ENST00000362093 CORTO00230 105 aa12.78□□□□□ -0.36
CKLF-204ENST00000362093 NDUFA4O00483 81 aa12.78□□□□□ -0.36
CKLF-204ENST00000362093 PLA2G10O15496 165 aa12.78□□□□□ -0.36
CKLF-204ENST00000362093 IGHV3-48P01763 117 aa12.78□□□□□ -0.36
CKLF-204ENST00000362093 VAMP1P23763 118 aa12.78□□□□□ -0.36
CKLF-204ENST00000362093 UBE2MP61081 183 aaKnown RBP12.78□□□□□ -0.36
CKLF-204ENST00000362093 CD69Q07108 199 aa12.78□□□□□ -0.36
CKLF-204ENST00000362093 MLANAQ16655 118 aa12.78□□□□□ -0.36
CKLF-204ENST00000362093 UXS1Q8NBZ7 420 aa12.78□□□□□ -0.36
CKLF-204ENST00000362093 CACNG8Q8WXS5 425 aa12.78□□□□□ -0.36
CKLF-204ENST00000362093 FLVCR2Q9UPI3 526 aa12.78□□□□□ -0.36
CKLF-204ENST00000362093 CEBPZOSA8MTT3 80 aa12.77□□□□□ -0.37
CKLF-204ENST00000362093 PITX3O75364 302 aa12.77□□□□□ -0.37
CKLF-204ENST00000362093 HTR2BP41595 481 aa12.77□□□□□ -0.37
CKLF-204ENST00000362093 C2orf83Q53S99 150 aa12.77□□□□□ -0.37
CKLF-204ENST00000362093 DYNLRB2Q8TF09 96 aa12.77□□□□□ -0.37
CKLF-204ENST00000362093 TMEM190Q8WZ59 177 aa12.77□□□□□ -0.37
CKLF-204ENST00000362093 FNDC4Q9H6D8 234 aaPredicted RBP12.77□□□□□ -0.37
CKLF-204ENST00000362093 HEYLQ9NQ87 328 aaPredicted RBP12.77□□□□□ -0.37
CKLF-204ENST00000362093 MRPL27Q9P0M9 148 aaKnown RBP12.77□□□□□ -0.37
CKLF-204ENST00000362093 HSPB7Q9UBY9 170 aa12.77□□□□□ -0.37
CKLF-204ENST00000362093 UFC1Q9Y3C8 167 aa12.77□□□□□ -0.37
CKLF-204ENST00000362093 K7EMT4 169 aa12.76□□□□□ -0.37
CKLF-204ENST00000362093 NUPL2O15504 423 aaKnown RBP12.76□□□□□ -0.37
CKLF-204ENST00000362093 NXPH3O95157 252 aa12.76□□□□□ -0.37
CKLF-204ENST00000362093 SLC25A6P12236 298 aa12.76□□□□□ -0.37
CKLF-204ENST00000362093 TNFRSF9Q07011 255 aa12.76□□□□□ -0.37
CKLF-204ENST00000362093 DUSP18Q8NEJ0 188 aa12.76□□□□□ -0.37
CKLF-204ENST00000362093 MARC2Q969Z3 335 aa12.76□□□□□ -0.37
CKLF-204ENST00000362093 CCDC32Q9BV29 185 aa12.76□□□□□ -0.37
CKLF-204ENST00000362093 MLXQ9UH92 298 aa12.76□□□□□ -0.37
CKLF-204ENST00000362093 C9orf170A2RU37 121 aa12.75□□□□□ -0.37
CKLF-204ENST00000362093 NPBWR1P48145 328 aa12.75□□□□□ -0.37
CKLF-204ENST00000362093 RELQ04864 619 aaPredicted RBP12.75□□□□□ -0.37
CKLF-204ENST00000362093 C11orf87Q6NUJ2 197 aa12.75□□□□□ -0.37
CKLF-204ENST00000362093 S100ZQ8WXG8 99 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms