RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 TGIF2-C20orf24A0A0A6YYL0 155 aa15.45■□□□□ 0.06
CLIP2-202ENST00000361545 HTN3P15516 51 aa15.45■□□□□ 0.06
CLIP2-202ENST00000361545 B3GALT5-AS1P59052 145 aa15.45■□□□□ 0.06
CLIP2-202ENST00000361545 CDC42EP3Q9UKI2 254 aa15.45■□□□□ 0.06
CLIP2-202ENST00000361545 IGKV1D-8A0A087WSZ0 117 aa15.45■□□□□ 0.06
CLIP2-202ENST00000361545 NSUN5P1Q3KNT7 163 aa15.45■□□□□ 0.06
CLIP2-202ENST00000361545 TMEM219Q86XT9 240 aa15.45■□□□□ 0.06
CLIP2-202ENST00000361545 C20orf204Q6ZNR8 217 aa15.44■□□□□ 0.06
CLIP2-202ENST00000361545 DSCR9P59020 149 aa15.44■□□□□ 0.06
CLIP2-202ENST00000361545 MIR17HGQ75NE6 70 aa15.44■□□□□ 0.06
CLIP2-202ENST00000361545 CACNG8Q8WXS5 425 aa15.44■□□□□ 0.06
CLIP2-202ENST00000361545 HSPB9Q9BQS6 159 aa15.44■□□□□ 0.06
CLIP2-202ENST00000361545 LYRM7Q5U5X0 104 aa15.44■□□□□ 0.06
CLIP2-202ENST00000361545 ZNF474Q6S9Z5 364 aaPredicted RBP15.44■□□□□ 0.06
CLIP2-202ENST00000361545 VMO1Q7Z5L0 202 aa15.44■□□□□ 0.06
CLIP2-202ENST00000361545 A0A0B4J293 547 aa15.44■□□□□ 0.06
CLIP2-202ENST00000361545 C5orf63A6NC05 138 aa15.44■□□□□ 0.06
CLIP2-202ENST00000361545 C8orf46Q8TAG6 207 aa15.44■□□□□ 0.06
CLIP2-202ENST00000361545 HIST1H2BAQ96A08 127 aa15.44■□□□□ 0.06
CLIP2-202ENST00000361545 TMEM178BH3BS89 294 aa15.43■□□□□ 0.06
CLIP2-202ENST00000361545 IGHG3P01860 377 aa15.43■□□□□ 0.06
CLIP2-202ENST00000361545 BRD3OSQ6XYD6 125 aa15.43■□□□□ 0.06
CLIP2-202ENST00000361545 NEUROG1Q92886 237 aa15.43■□□□□ 0.06
CLIP2-202ENST00000361545 C15orf61A6NNL5 157 aa15.43■□□□□ 0.06
CLIP2-202ENST00000361545 RBFOX2O43251 390 aaKnown RBP eCLIP15.43■□□□□ 0.062e-8■■□□□ 12.2
CLIP2-202ENST00000361545 WNT2P09544 360 aa15.43■□□□□ 0.06
CLIP2-202ENST00000361545 FAM89BQ8N5H3 189 aa15.43■□□□□ 0.06
CLIP2-202ENST00000361545 TCRBV4S1A1TA0A5B7 111 aa15.43■□□□□ 0.06
CLIP2-202ENST00000361545 GCSHP23434 173 aa15.43■□□□□ 0.06
CLIP2-202ENST00000361545 CRIM1Q9NZV1 1036 aa15.43■□□□□ 0.06
CLIP2-202ENST00000361545 USF3Q68DE3 2245 aa15.43■□□□□ 0.06
CLIP2-202ENST00000361545 IGKV1-27A0A075B6S5 117 aa15.43■□□□□ 0.06
CLIP2-202ENST00000361545 SFRP2Q96HF1 295 aa15.43■□□□□ 0.06
CLIP2-202ENST00000361545 FBLN5Q9UBX5 448 aa15.43■□□□□ 0.06
CLIP2-202ENST00000361545 FER1L5A0AVI2 2057 aa15.42■□□□□ 0.06
CLIP2-202ENST00000361545 IGHV2-26A0A0B4J1V2 119 aa15.42■□□□□ 0.06
CLIP2-202ENST00000361545 LILRA1O75019 489 aa15.42■□□□□ 0.06
CLIP2-202ENST00000361545 SRIP30626 198 aa15.42■□□□□ 0.06
CLIP2-202ENST00000361545 TMEM200BQ69YZ2 307 aa15.42■□□□□ 0.06
CLIP2-202ENST00000361545 TCF24Q7RTU0 167 aa15.42■□□□□ 0.06
CLIP2-202ENST00000361545 GLMPQ8WWB7 406 aa15.42■□□□□ 0.06
CLIP2-202ENST00000361545 TRBV20OR9-2A0A075B6H5 130 aa15.42■□□□□ 0.06
CLIP2-202ENST00000361545 PSPNO60542 156 aa15.42■□□□□ 0.06
CLIP2-202ENST00000361545 DUTP33316 252 aaKnown RBP15.42■□□□□ 0.06
CLIP2-202ENST00000361545 LEMD1Q68G75 181 aa15.42■□□□□ 0.06
CLIP2-202ENST00000361545 LINC01587Q99440 93 aa15.42■□□□□ 0.06
CLIP2-202ENST00000361545 C1QTNF9BB2RNN3 333 aa15.42■□□□□ 0.06
CLIP2-202ENST00000361545 C1QTNF9P0C862 333 aa15.42■□□□□ 0.06
CLIP2-202ENST00000361545 GPX4P36969 197 aaPredicted RBP15.42■□□□□ 0.06
CLIP2-202ENST00000361545 PRSS8Q16651 343 aa15.42■□□□□ 0.06
CLIP2-202ENST00000361545 ZNF324BQ6AW86 544 aaPredicted RBP15.41■□□□□ 0.06
CLIP2-202ENST00000361545 SELENOKQ9Y6D0 94 aa15.41■□□□□ 0.06
CLIP2-202ENST00000361545 F8VVB4 439 aa15.41■□□□□ 0.06
CLIP2-202ENST00000361545 F8VWA3 439 aa15.41■□□□□ 0.06
CLIP2-202ENST00000361545 RNASE4P34096 147 aaKnown RBP15.41■□□□□ 0.06
CLIP2-202ENST00000361545 GFI1Q99684 422 aa15.41■□□□□ 0.06
CLIP2-202ENST00000361545 KIR2DL4Q99706 377 aa15.41■□□□□ 0.06
CLIP2-202ENST00000361545 PSMB11A5LHX3 300 aa15.41■□□□□ 0.06
CLIP2-202ENST00000361545 MLNRO43193 412 aa15.41■□□□□ 0.06
CLIP2-202ENST00000361545 RPUSD1Q9UJJ7 312 aaKnown RBP15.41■□□□□ 0.06
CLIP2-202ENST00000361545 ASIPP42127 132 aa15.41■□□□□ 0.06
CLIP2-202ENST00000361545 CD177Q8N6Q3 437 aa15.41■□□□□ 0.06
CLIP2-202ENST00000361545 TTC28Q96AY4 2481 aa15.41■□□□□ 0.06
CLIP2-202ENST00000361545 ZFHX2Q9C0A1 2572 aaPredicted RBP15.41■□□□□ 0.06
CLIP2-202ENST00000361545 LY6G6EA0A0G2JKS1 128 aa15.4■□□□□ 0.06
CLIP2-202ENST00000361545 LEPROTL1O95214 131 aa15.4■□□□□ 0.06
CLIP2-202ENST00000361545 U3KQA8 63 aa15.4■□□□□ 0.06
CLIP2-202ENST00000361545 SCN8AQ9UQD0 1980 aa15.4■□□□□ 0.06
CLIP2-202ENST00000361545 B4DSR2 109 aa15.4■□□□□ 0.06
CLIP2-202ENST00000361545 CD55P08174 381 aa15.4■□□□□ 0.06
CLIP2-202ENST00000361545 MYOD1P15172 320 aa15.4■□□□□ 0.06
CLIP2-202ENST00000361545 MGAMO43451 1857 aa15.4■□□□□ 0.06
CLIP2-202ENST00000361545 PEX7O00628 323 aa15.4■□□□□ 0.06
CLIP2-202ENST00000361545 NPFFO15130 113 aa15.4■□□□□ 0.06
CLIP2-202ENST00000361545 OR9G9P0C7N8 305 aa15.4■□□□□ 0.06
CLIP2-202ENST00000361545 ZNF525Q8N782 197 aa15.4■□□□□ 0.06
CLIP2-202ENST00000361545 BDP1A6H8Y1 2624 aa15.4■□□□□ 0.06
CLIP2-202ENST00000361545 DPRXA6NFQ7 191 aa15.4■□□□□ 0.06
CLIP2-202ENST00000361545 IGHV1-8P0DP01 117 aa15.4■□□□□ 0.06
CLIP2-202ENST00000361545 LDLRAD2Q5SZI1 272 aa15.4■□□□□ 0.06
CLIP2-202ENST00000361545 CADP27708 2225 aa15.39■□□□□ 0.06
CLIP2-202ENST00000361545 SCO2A0A1W2PP80 73 aa15.39■□□□□ 0.05
CLIP2-202ENST00000361545 OTX1P32242 354 aaPredicted RBP15.39■□□□□ 0.05
CLIP2-202ENST00000361545 TMEM144Q7Z5S9 345 aa15.39■□□□□ 0.05
CLIP2-202ENST00000361545 COL25A1Q9BXS0 654 aaPredicted RBP15.39■□□□□ 0.05
CLIP2-202ENST00000361545 NHLRC3Q5JS37 347 aa15.39■□□□□ 0.05
CLIP2-202ENST00000361545 C18orf12Q96KH6 178 aa15.39■□□□□ 0.05
CLIP2-202ENST00000361545 MOB4Q9Y3A3 225 aa15.39■□□□□ 0.05
CLIP2-202ENST00000361545 GRIFINA4D1Z8 144 aa15.39■□□□□ 0.05
CLIP2-202ENST00000361545 ATP5G3P48201 142 aa15.39■□□□□ 0.05
CLIP2-202ENST00000361545 C10orf55Q5SWW7 151 aa15.39■□□□□ 0.05
CLIP2-202ENST00000361545 HEATR1Q9H583 2144 aaKnown RBP15.39■□□□□ 0.05
CLIP2-202ENST00000361545 COL5A1-AS1Q5SY13 56 aa15.39■□□□□ 0.05
CLIP2-202ENST00000361545 RPRMLQ8N4K4 120 aa15.39■□□□□ 0.05
CLIP2-202ENST00000361545 OR10W1Q8NGF6 305 aa15.39■□□□□ 0.05
CLIP2-202ENST00000361545 MARVELD3Q96A59 401 aa15.39■□□□□ 0.05
CLIP2-202ENST00000361545 Q9H3A6 140 aa15.39■□□□□ 0.05
CLIP2-202ENST00000361545 PNRC2Q9NPJ4 139 aaKnown RBP15.38■□□□□ 0.05
CLIP2-202ENST00000361545 RNF125Q96EQ8 232 aa15.38■□□□□ 0.05
CLIP2-202ENST00000361545 H7C2G1 150 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms