RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 MS4A6AQ9H2W1 248 aa15.38■□□□□ 0.05
CD47-202ENST00000361309 DNASE2O00115 360 aaPredicted RBP15.37■□□□□ 0.05
CD47-202ENST00000361309 ST8SIA3O43173 380 aa15.37■□□□□ 0.05
CD47-202ENST00000361309 XRCC3O43542 346 aa15.37■□□□□ 0.05
CD47-202ENST00000361309 CD5P06127 495 aa15.37■□□□□ 0.05
CD47-202ENST00000361309 TOMM20LQ6UXN7 152 aa15.37■□□□□ 0.05
CD47-202ENST00000361309 FAM24BQ8N5W8 94 aa15.37■□□□□ 0.05
CD47-202ENST00000361309 Q8NAQ8 132 aa15.37■□□□□ 0.05
CD47-202ENST00000361309 GINS3Q9BRX5 216 aa15.37■□□□□ 0.05
CD47-202ENST00000361309 ANAPC10Q9UM13 185 aa15.37■□□□□ 0.05
CD47-202ENST00000361309 IGHV3-66A0A0C4DH42 116 aa15.36■□□□□ 0.05
CD47-202ENST00000361309 C11orf94C9JXX5 98 aa15.36■□□□□ 0.05
CD47-202ENST00000361309 DFFBO76075 338 aa15.36■□□□□ 0.05
CD47-202ENST00000361309 PHLDA2Q53GA4 152 aa15.36■□□□□ 0.05
CD47-202ENST00000361309 ZNF114Q8NC26 417 aa15.36■□□□□ 0.05
CD47-202ENST00000361309 OR5H2Q8NGV7 314 aa15.36■□□□□ 0.05
CD47-202ENST00000361309 VSIRQ9H7M9 311 aa15.36■□□□□ 0.05
CD47-202ENST00000361309 FAT2Q9NYQ8 4349 aa15.36■□□□□ 0.05
CD47-202ENST00000361309 RPL11P62913 178 aaKnown RBP15.35■□□□□ 0.05
CD47-202ENST00000361309 STHQ8IWL8 128 aa15.35■□□□□ 0.05
CD47-202ENST00000361309 OR4A16Q8NH70 328 aa15.35■□□□□ 0.05
CD47-202ENST00000361309 S100A16Q96FQ6 103 aaKnown RBP15.35■□□□□ 0.05
CD47-202ENST00000361309 SEC22AQ96IW7 307 aa15.35■□□□□ 0.05
CD47-202ENST00000361309 HRH4Q9H3N8 390 aa15.35■□□□□ 0.05
CD47-202ENST00000361309 DNAH17Q9UFH2 4485 aa15.34■□□□□ 0.05
CD47-202ENST00000361309 RBMY1A1P0DJD3 496 aaKnown RBP15.34■□□□□ 0.05
CD47-202ENST00000361309 RBMY1CP0DJD4 496 aa15.34■□□□□ 0.05
CD47-202ENST00000361309 TAS2R46P59540 309 aa15.34■□□□□ 0.05
CD47-202ENST00000361309 PRCDQ00LT1 54 aa15.34■□□□□ 0.05
CD47-202ENST00000361309 RBMY1FQ15415 496 aaKnown RBP15.34■□□□□ 0.05
CD47-202ENST00000361309 H2BFWTQ7Z2G1 175 aa15.34■□□□□ 0.05
CD47-202ENST00000361309 DUSP18Q8NEJ0 188 aa15.34■□□□□ 0.05
CD47-202ENST00000361309 OR6F1Q8NGZ6 308 aa15.34■□□□□ 0.05
CD47-202ENST00000361309 DNAH2Q9P225 4427 aa15.33■□□□□ 0.05
CD47-202ENST00000361309 TRAV2A0A0B4J234 112 aa15.33■□□□□ 0.04
CD47-202ENST00000361309 IGHV4-28A0A0C4DH34 117 aa15.33■□□□□ 0.04
CD47-202ENST00000361309 IGKV1-39P01597 117 aa15.33■□□□□ 0.04
CD47-202ENST00000361309 IGKV1D-39P04432 117 aa15.33■□□□□ 0.04
CD47-202ENST00000361309 GIG44P09565 113 aaPredicted RBP15.33■□□□□ 0.04
CD47-202ENST00000361309 NAT1P18440 290 aa15.33■□□□□ 0.04
CD47-202ENST00000361309 ZFAND3Q9H8U3 227 aa15.33■□□□□ 0.04
CD47-202ENST00000361309 FAM212BQ9NTI7 297 aaPredicted RBP15.33■□□□□ 0.04
CD47-202ENST00000361309 RABAC1Q9UI14 185 aa15.33■□□□□ 0.04
CD47-202ENST00000361309 PUS1Q9Y606 427 aaKnown RBP eCLIP15.33■□□□□ 0.04
CD47-202ENST00000361309 PKHD1P08F94 4074 aa15.33■□□□□ 0.04
CD47-202ENST00000361309 HLA-DMBP28068 263 aa15.32■□□□□ 0.04
CD47-202ENST00000361309 HRH1P35367 487 aa15.32■□□□□ 0.04
CD47-202ENST00000361309 NPBWR1P48145 328 aa15.32■□□□□ 0.04
CD47-202ENST00000361309 TAS2R20P59543 309 aa15.32■□□□□ 0.04
CD47-202ENST00000361309 ERHP84090 104 aaKnown RBP15.32■□□□□ 0.04
CD47-202ENST00000361309 ZNF600Q6ZNG1 722 aa15.32■□□□□ 0.04
CD47-202ENST00000361309 TBC1D26Q86UD7 250 aa15.32■□□□□ 0.04
CD47-202ENST00000361309 RYR1P21817 5038 aa15.32■□□□□ 0.04
CD47-202ENST00000361309 MUC4Q99102 2169 aa15.32■□□□□ 0.04
CD47-202ENST00000361309 TMEM127O75204 238 aa15.31■□□□□ 0.04
CD47-202ENST00000361309 HLA-DMAP28067 261 aa15.31■□□□□ 0.04
CD47-202ENST00000361309 HSPE1P61604 102 aaKnown RBP15.31■□□□□ 0.04
CD47-202ENST00000361309 SPINK9Q5DT21 86 aa15.31■□□□□ 0.04
CD47-202ENST00000361309 UBE2NLQ5JXB2 153 aa15.31■□□□□ 0.04
CD47-202ENST00000361309 TMEM69Q5SWH9 247 aa15.31■□□□□ 0.04
CD47-202ENST00000361309 Q6ZTC4 211 aa15.31■□□□□ 0.04
CD47-202ENST00000361309 LYSMD2Q8IV50 215 aa15.31■□□□□ 0.04
CD47-202ENST00000361309 MRGPRFQ96AM1 343 aa15.31■□□□□ 0.04
CD47-202ENST00000361309 A0A1B0GU03 582 aa15.3■□□□□ 0.04
CD47-202ENST00000361309 MIFP14174 115 aa15.3■□□□□ 0.04
CD47-202ENST00000361309 S100GP29377 79 aa15.3■□□□□ 0.04
CD47-202ENST00000361309 LPCAT3Q6P1A2 487 aa15.3■□□□□ 0.04
CD47-202ENST00000361309 LINC00336Q6ZUF6 198 aa15.3■□□□□ 0.04
CD47-202ENST00000361309 TRPT1Q86TN4 253 aaKnown RBP15.3■□□□□ 0.04
CD47-202ENST00000361309 YTHDF1Q9BYJ9 559 aaKnown RBP15.3■□□□□ 0.04
CD47-202ENST00000361309 TMEM231Q9H6L2 316 aa15.3■□□□□ 0.04
CD47-202ENST00000361309 IGHV4-4A0A075B6R2 117 aa15.29■□□□□ 0.04
CD47-202ENST00000361309 TRAV10A0A0B4J240 114 aa15.29■□□□□ 0.04
CD47-202ENST00000361309 TMEM50AO95807 157 aa15.29■□□□□ 0.04
CD47-202ENST00000361309 PRSS3P35030 304 aa15.29■□□□□ 0.04
CD47-202ENST00000361309 TGFBR1P36897 503 aa15.29■□□□□ 0.04
CD47-202ENST00000361309 TSPAN5P62079 268 aa15.29■□□□□ 0.04
CD47-202ENST00000361309 TMEM41BQ5BJD5 291 aa15.29■□□□□ 0.04
CD47-202ENST00000361309 ELOA3CA0A087WX78 387 aaPredicted RBP15.28■□□□□ 0.04
CD47-202ENST00000361309 ZNF705EA8MWA4 302 aaPredicted RBP15.28■□□□□ 0.04
CD47-202ENST00000361309 K7EQG2 157 aa15.28■□□□□ 0.04
CD47-202ENST00000361309 SPP1P10451 314 aa15.28■□□□□ 0.04
CD47-202ENST00000361309 C4BPBP20851 252 aa15.28■□□□□ 0.04
CD47-202ENST00000361309 NPPCP23582 126 aa15.28■□□□□ 0.04
CD47-202ENST00000361309 IZUMO4Q1ZYL8 232 aa15.28■□□□□ 0.04
CD47-202ENST00000361309 MORN3Q6PF18 240 aaPredicted RBP15.28■□□□□ 0.04
CD47-202ENST00000361309 SAMD12Q8N8I0 201 aa15.28■□□□□ 0.04
CD47-202ENST00000361309 STXBP6Q8NFX7 210 aa15.28■□□□□ 0.04
CD47-202ENST00000361309 X6R8D5 127 aa15.28■□□□□ 0.04
CD47-202ENST00000361309 KNCNA6PVL3 124 aa15.27■□□□□ 0.04
CD47-202ENST00000361309 SNCAP37840 140 aa15.27■□□□□ 0.04
CD47-202ENST00000361309 NEDD8Q15843 81 aa15.27■□□□□ 0.04
CD47-202ENST00000361309 CROCCP3Q8IVE0 287 aa15.27■□□□□ 0.04
CD47-202ENST00000361309 CENPSQ8N2Z9 138 aa15.27■□□□□ 0.04
CD47-202ENST00000361309 A0A1B0GVY2 172 aa15.26■□□□□ 0.03
CD47-202ENST00000361309 A0A1W2PS18 150 aa15.26■□□□□ 0.03
CD47-202ENST00000361309 ZNF688P0C7X2 276 aa15.26■□□□□ 0.03
CD47-202ENST00000361309 GRAMD2BQ96HH9 432 aa15.26■□□□□ 0.03
CD47-202ENST00000361309 CLEC5AQ9NY25 188 aa15.26■□□□□ 0.03
CD47-202ENST00000361309 P2RY1P47900 373 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms