RNA–Protein interactions for RNA: ENST00000361115.4

CCL28-201, Transcript of C-C motif chemokine ligand 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL28, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-201ENST00000361115 C3orf79P0CE67 100 aa6.35□□□□□ -1.39
CCL28-201ENST00000361115 COX5AP20674 150 aa6.35□□□□□ -1.39
CCL28-201ENST00000361115 USF1P22415 310 aaPredicted RBP6.35□□□□□ -1.39
CCL28-201ENST00000361115 AMTP48728 403 aa6.35□□□□□ -1.39
CCL28-201ENST00000361115 FUT6P51993 359 aa6.35□□□□□ -1.39
CCL28-201ENST00000361115 TMEM249Q2WGJ8 235 aa6.35□□□□□ -1.39
CCL28-201ENST00000361115 KIAA1644Q3SXP7 199 aa6.35□□□□□ -1.39
CCL28-201ENST00000361115 ZNF585BQ52M93 769 aa6.35□□□□□ -1.39
CCL28-201ENST00000361115 SLC25A53Q5H9E4 307 aa6.35□□□□□ -1.39
CCL28-201ENST00000361115 LDLRAD2Q5SZI1 272 aa6.35□□□□□ -1.39
CCL28-201ENST00000361115 C10orf128Q5T292 105 aa6.35□□□□□ -1.39
CCL28-201ENST00000361115 C12orf54Q6X4T0 127 aa6.35□□□□□ -1.39
CCL28-201ENST00000361115 C10orf105Q8TEF2 133 aa6.35□□□□□ -1.39
CCL28-201ENST00000361115 TMEM54Q969K7 222 aa6.35□□□□□ -1.39
CCL28-201ENST00000361115 LSM10Q969L4 123 aaKnown RBP6.35□□□□□ -1.39
CCL28-201ENST00000361115 BET1LQ9NYM9 111 aa6.35□□□□□ -1.39
CCL28-201ENST00000361115 SMPXQ9UHP9 88 aa6.35□□□□□ -1.39
CCL28-201ENST00000361115 A0A1W2PS18 150 aa6.35□□□□□ -1.39
CCL28-201ENST00000361115 SNURFLB1AK76 121 aa6.35□□□□□ -1.39
CCL28-201ENST00000361115 J3QLI3 93 aa6.35□□□□□ -1.39
CCL28-201ENST00000361115 SYNGR3O43761 229 aa6.35□□□□□ -1.39
CCL28-201ENST00000361115 ZNF253O75346 499 aa6.35□□□□□ -1.39
CCL28-201ENST00000361115 IGLV2-14P01704 120 aa6.35□□□□□ -1.39
CCL28-201ENST00000361115 LCN12Q6JVE5 192 aa6.35□□□□□ -1.39
CCL28-201ENST00000361115 NIT1Q86X76 327 aa6.35□□□□□ -1.39
CCL28-201ENST00000361115 ZIC4Q8N9L1 334 aa6.35□□□□□ -1.39
CCL28-201ENST00000361115 APOBEC3DQ96AK3 386 aaPredicted RBP6.35□□□□□ -1.39
CCL28-201ENST00000361115 TMEM45BQ96B21 275 aa6.35□□□□□ -1.39
CCL28-201ENST00000361115 HSPB7Q9UBY9 170 aa6.35□□□□□ -1.39
CCL28-201ENST00000361115 TP73-AS1Q9UF72 201 aa6.35□□□□□ -1.39
CCL28-201ENST00000361115 DOCK7Q96N67 2140 aa6.35□□□□□ -1.39
CCL28-201ENST00000361115 LOC102724200A0A096LPH7 203 aaPredicted RBP6.34□□□□□ -1.39
CCL28-201ENST00000361115 TRAV38-1A0A0B4J264 116 aa6.34□□□□□ -1.39
CCL28-201ENST00000361115 HELTA6NFD8 242 aa6.34□□□□□ -1.39
CCL28-201ENST00000361115 K7EN84 100 aa6.34□□□□□ -1.39
CCL28-201ENST00000361115 ZNHIT1O43257 154 aa6.34□□□□□ -1.39
CCL28-201ENST00000361115 THBDP07204 575 aa6.34□□□□□ -1.39
CCL28-201ENST00000361115 ZNF83P51522 516 aa6.34□□□□□ -1.39
CCL28-201ENST00000361115 LGALS4P56470 323 aa6.34□□□□□ -1.39
CCL28-201ENST00000361115 EFNB3Q15768 340 aa6.34□□□□□ -1.39
CCL28-201ENST00000361115 SMIM21Q3B7S5 101 aa6.34□□□□□ -1.39
CCL28-201ENST00000361115 TMEM177Q53S58 311 aa6.34□□□□□ -1.39
CCL28-201ENST00000361115 FAM19A2Q8N3H0 131 aa6.34□□□□□ -1.39
CCL28-201ENST00000361115 GLMPQ8WWB7 406 aa6.34□□□□□ -1.39
CCL28-201ENST00000361115 NPCDR1Q9BY65 106 aa6.34□□□□□ -1.39
CCL28-201ENST00000361115 OR2W1Q9Y3N9 320 aa6.34□□□□□ -1.39
CCL28-201ENST00000361115 IGHV2-26A0A0B4J1V2 119 aa6.34□□□□□ -1.39
CCL28-201ENST00000361115 SCO2A0A1W2PP80 73 aa6.34□□□□□ -1.39
CCL28-201ENST00000361115 A0A1W2PPV4 95 aa6.34□□□□□ -1.39
CCL28-201ENST00000361115 IGLC7A0M8Q6 106 aa6.34□□□□□ -1.39
CCL28-201ENST00000361115 DPRXA6NFQ7 191 aa6.34□□□□□ -1.39
CCL28-201ENST00000361115 SIRPB1O00241 398 aa6.34□□□□□ -1.39
CCL28-201ENST00000361115 PDE6DO43924 150 aa6.34□□□□□ -1.39
CCL28-201ENST00000361115 SPINK4O60575 86 aa6.34□□□□□ -1.39
CCL28-201ENST00000361115 GATA3P23771 443 aa6.34□□□□□ -1.39
CCL28-201ENST00000361115 COL8A2P25067 703 aa6.34□□□□□ -1.39
CCL28-201ENST00000361115 VAMP3Q15836 100 aa6.34□□□□□ -1.39
CCL28-201ENST00000361115 TMEM147Q9BVK8 224 aa6.34□□□□□ -1.39
CCL28-201ENST00000361115 FGF23Q9GZV9 251 aaPredicted RBP6.34□□□□□ -1.39
CCL28-201ENST00000361115 CST9LQ9H4G1 147 aa6.34□□□□□ -1.39
CCL28-201ENST00000361115 IL36BQ9NZH7 164 aa6.34□□□□□ -1.39
CCL28-201ENST00000361115 OR1A1Q9P1Q5 309 aa6.34□□□□□ -1.39
CCL28-201ENST00000361115 CLN8Q9UBY8 286 aa6.34□□□□□ -1.39
CCL28-201ENST00000361115 MRPS16Q9Y3D3 137 aaKnown RBP6.34□□□□□ -1.39
CCL28-201ENST00000361115 TRAV30A0A087WSZ9 112 aa6.34□□□□□ -1.4
CCL28-201ENST00000361115 hCG_38984A0A1B0GV85 526 aa6.34□□□□□ -1.4
CCL28-201ENST00000361115 PMS2P5A8MQ11 134 aa6.34□□□□□ -1.4
CCL28-201ENST00000361115 RNF223E7ERA6 249 aa6.34□□□□□ -1.4
CCL28-201ENST00000361115 PSG1P11464 419 aa6.34□□□□□ -1.4
CCL28-201ENST00000361115 OCIAD2Q56VL3 154 aa6.34□□□□□ -1.4
CCL28-201ENST00000361115 Q6ZT83 130 aa6.34□□□□□ -1.4
CCL28-201ENST00000361115 CIARTQ8N365 385 aaPredicted RBP6.34□□□□□ -1.4
CCL28-201ENST00000361115 OR4F17Q8NGA8 305 aa6.34□□□□□ -1.4
CCL28-201ENST00000361115 UBALD1Q8TB05 177 aa6.34□□□□□ -1.4
CCL28-201ENST00000361115 SPSB4Q96A44 273 aa6.34□□□□□ -1.4
CCL28-201ENST00000361115 SMR3AQ99954 134 aa6.34□□□□□ -1.4
CCL28-201ENST00000361115 QTRT1Q9BXR0 403 aaKnown RBP6.34□□□□□ -1.4
CCL28-201ENST00000361115 KCNIP2Q9NS61 270 aa6.34□□□□□ -1.4
CCL28-201ENST00000361115 PSG11Q9UQ72 335 aa6.34□□□□□ -1.4
CCL28-201ENST00000361115 KIR2DS1A0A191URI9 304 aa6.33□□□□□ -1.4
CCL28-201ENST00000361115 A0A1W2PPR1 153 aa6.33□□□□□ -1.4
CCL28-201ENST00000361115 IGHV4-31P0DP07 118 aa6.33□□□□□ -1.4
CCL28-201ENST00000361115 KIR2DS4P43632 304 aa6.33□□□□□ -1.4
CCL28-201ENST00000361115 KIR2DS1Q14954 304 aa6.33□□□□□ -1.4
CCL28-201ENST00000361115 SRSF7Q16629 238 aaKnown RBP eCLIP6.33□□□□□ -1.4
CCL28-201ENST00000361115 KRTAP24-1Q3LI83 254 aa6.33□□□□□ -1.4
CCL28-201ENST00000361115 OR1F12Q8NHA8 337 aa6.33□□□□□ -1.4
CCL28-201ENST00000361115 IL1F10Q8WWZ1 152 aa6.33□□□□□ -1.4
CCL28-201ENST00000361115 FAM168AQ92567 244 aa6.33□□□□□ -1.4
CCL28-201ENST00000361115 KCNS1Q96KK3 526 aa6.33□□□□□ -1.4
CCL28-201ENST00000361115 IGKV3D-15A0A087WSY6 115 aa6.33□□□□□ -1.4
CCL28-201ENST00000361115 IGHV1-69-2A0A0G2JMI3 117 aa6.33□□□□□ -1.4
CCL28-201ENST00000361115 DEGS1O15121 323 aa6.33□□□□□ -1.4
CCL28-201ENST00000361115 ZIC3O60481 467 aa6.33□□□□□ -1.4
CCL28-201ENST00000361115 SCGB2A1O75556 95 aa6.33□□□□□ -1.4
CCL28-201ENST00000361115 CA2P00918 260 aa6.33□□□□□ -1.4
CCL28-201ENST00000361115 S100GP29377 79 aa6.33□□□□□ -1.4
CCL28-201ENST00000361115 RAB31Q13636 194 aa6.33□□□□□ -1.4
CCL28-201ENST00000361115 TCTEX1D1Q8N7M0 179 aa6.33□□□□□ -1.4
CCL28-201ENST00000361115 Q8N7P7 452 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms