RNA–Protein interactions for RNA: ENST00000360428.8

DSC3-201, Transcript of desmocollin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DSC3, Length 6,939 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSC3-201ENST00000360428 TNS1Q9HBL0 1735 aaKnown RBP4.99□□□□□ -1.61
DSC3-201ENST00000360428 ITGBL1O95965 494 aaPredicted RBP4.99□□□□□ -1.61
DSC3-201ENST00000360428 DPM3Q9P2X0 92 aa4.99□□□□□ -1.61
DSC3-201ENST00000360428 PILRBQ9UKJ0 227 aa4.99□□□□□ -1.61
DSC3-201ENST00000360428 MAP1BP46821 2468 aaKnown RBP4.99□□□□□ -1.61
DSC3-201ENST00000360428 A0A1W2PRE2 83 aa4.98□□□□□ -1.61
DSC3-201ENST00000360428 LDLRAD4O15165 306 aa4.98□□□□□ -1.61
DSC3-201ENST00000360428 TOMM40O96008 361 aa4.98□□□□□ -1.61
DSC3-201ENST00000360428 ATP5G3P48201 142 aa4.98□□□□□ -1.61
DSC3-201ENST00000360428 EGR4Q05215 589 aa4.98□□□□□ -1.61
DSC3-201ENST00000360428 FAM19A2Q8N3H0 131 aa4.98□□□□□ -1.61
DSC3-201ENST00000360428 PLEKHB2Q96CS7 222 aa4.98□□□□□ -1.61
DSC3-201ENST00000360428 DNAJC30Q96LL9 226 aa4.98□□□□□ -1.61
DSC3-201ENST00000360428 FOXA2Q9Y261 457 aaPredicted RBP4.98□□□□□ -1.61
DSC3-201ENST00000360428 BRCA1P38398 1863 aaKnown RBP4.98□□□□□ -1.61
DSC3-201ENST00000360428 SPINT1O43278 529 aa4.98□□□□□ -1.61
DSC3-201ENST00000360428 SNAI2O43623 268 aa4.98□□□□□ -1.61
DSC3-201ENST00000360428 SMIM10L1P0DMW3 83 aa4.98□□□□□ -1.61
DSC3-201ENST00000360428 ZP1P60852 638 aa4.98□□□□□ -1.61
DSC3-201ENST00000360428 SMIM10Q96HG1 83 aa4.98□□□□□ -1.61
DSC3-201ENST00000360428 RTBDNQ9BSG5 229 aaPredicted RBP4.98□□□□□ -1.61
DSC3-201ENST00000360428 TRAV2A0A0B4J234 112 aa4.98□□□□□ -1.61
DSC3-201ENST00000360428 A0A1B0GW64 132 aa4.98□□□□□ -1.61
DSC3-201ENST00000360428 F8VVB4 439 aa4.98□□□□□ -1.61
DSC3-201ENST00000360428 F8VWA3 439 aa4.98□□□□□ -1.61
DSC3-201ENST00000360428 GLRXP35754 106 aa4.98□□□□□ -1.61
DSC3-201ENST00000360428 RIPPLY3P57055 190 aa4.98□□□□□ -1.61
DSC3-201ENST00000360428 FAM166AQ6J272 317 aa4.98□□□□□ -1.61
DSC3-201ENST00000360428 EPDR1Q9UM22 224 aa4.98□□□□□ -1.61
DSC3-201ENST00000360428 H3BTX0 84 aa4.98□□□□□ -1.61
DSC3-201ENST00000360428 LY6EQ16553 131 aa4.98□□□□□ -1.61
DSC3-201ENST00000360428 LINC01590Q5TEZ4 76 aa4.98□□□□□ -1.61
DSC3-201ENST00000360428 HS3ST3B1Q9Y662 390 aa4.98□□□□□ -1.61
DSC3-201ENST00000360428 COL11A1P12107 1806 aaPredicted RBP4.98□□□□□ -1.61
DSC3-201ENST00000360428 MIR17HGQ75NE6 70 aa4.98□□□□□ -1.61
DSC3-201ENST00000360428 FGF11Q92914 225 aa4.98□□□□□ -1.61
DSC3-201ENST00000360428 MRPL20Q9BYC9 149 aaKnown RBP4.98□□□□□ -1.61
DSC3-201ENST00000360428 LOC285556D6RIA3 1793 aa4.98□□□□□ -1.61
DSC3-201ENST00000360428 TGFAP01135 160 aa4.97□□□□□ -1.61
DSC3-201ENST00000360428 ESDP10768 282 aa4.97□□□□□ -1.61
DSC3-201ENST00000360428 EGR1P18146 543 aa4.97□□□□□ -1.61
DSC3-201ENST00000360428 LAGE3Q14657 143 aa4.97□□□□□ -1.61
DSC3-201ENST00000360428 SRXN1Q9BYN0 137 aa4.97□□□□□ -1.61
DSC3-201ENST00000360428 CHD5Q8TDI0 1954 aa4.97□□□□□ -1.61
DSC3-201ENST00000360428 TRAV12-3A0A0B4J271 114 aa4.97□□□□□ -1.61
DSC3-201ENST00000360428 LINC00271P0C7V0 271 aa4.97□□□□□ -1.61
DSC3-201ENST00000360428 SRSF7Q16629 238 aaKnown RBP eCLIP4.97□□□□□ -1.61
DSC3-201ENST00000360428 Q5BKY6 102 aa4.97□□□□□ -1.61
DSC3-201ENST00000360428 Q6ZT83 130 aa4.97□□□□□ -1.61
DSC3-201ENST00000360428 TMEM167AQ8TBQ9 72 aa4.97□□□□□ -1.61
DSC3-201ENST00000360428 LEAP2Q969E1 77 aa4.97□□□□□ -1.61
DSC3-201ENST00000360428 OVOL1O14753 267 aa4.97□□□□□ -1.61
DSC3-201ENST00000360428 YPEL1O60688 119 aa4.97□□□□□ -1.61
DSC3-201ENST00000360428 IGKV3-20P01619 116 aa4.97□□□□□ -1.61
DSC3-201ENST00000360428 MPZP25189 248 aa4.97□□□□□ -1.61
DSC3-201ENST00000360428 TSKUQ8WUA8 353 aa4.97□□□□□ -1.61
DSC3-201ENST00000360428 IFI27L1Q96BM0 104 aa4.97□□□□□ -1.61
DSC3-201ENST00000360428 YPEL2Q96QA6 119 aa4.97□□□□□ -1.61
DSC3-201ENST00000360428 DMRTA2Q96SC8 542 aa4.97□□□□□ -1.61
DSC3-201ENST00000360428 VKORC1Q9BQB6 163 aa4.97□□□□□ -1.61
DSC3-201ENST00000360428 WBP1LQ9NX94 342 aa4.97□□□□□ -1.61
DSC3-201ENST00000360428 LINC00312Q9Y6C7 94 aa4.97□□□□□ -1.61
DSC3-201ENST00000360428 IGKV1-8A0A0C4DH67 115 aa4.97□□□□□ -1.61
DSC3-201ENST00000360428 TCRBV4S1A1TA0A5B7 111 aa4.97□□□□□ -1.61
DSC3-201ENST00000360428 ADARB2-AS1A8MUL3 147 aa4.97□□□□□ -1.61
DSC3-201ENST00000360428 UPK2O00526 184 aa4.97□□□□□ -1.61
DSC3-201ENST00000360428 CD28P10747 220 aa4.97□□□□□ -1.61
DSC3-201ENST00000360428 TDGF1P3P51864 188 aa4.97□□□□□ -1.61
DSC3-201ENST00000360428 IGLV3-21P80748 117 aaPredicted RBP4.97□□□□□ -1.61
DSC3-201ENST00000360428 TMEM155Q4W5P6 130 aa4.97□□□□□ -1.61
DSC3-201ENST00000360428 RPL39P5Q59GN2 51 aa4.97□□□□□ -1.61
DSC3-201ENST00000360428 LDLRAD2Q5SZI1 272 aa4.97□□□□□ -1.61
DSC3-201ENST00000360428 HEPN1Q6WQI6 88 aa4.97□□□□□ -1.61
DSC3-201ENST00000360428 NR2C2APQ86WQ0 139 aa4.97□□□□□ -1.61
DSC3-201ENST00000360428 STHQ8IWL8 128 aa4.97□□□□□ -1.61
DSC3-201ENST00000360428 ITLN2Q8WWU7 325 aaPredicted RBP4.97□□□□□ -1.61
DSC3-201ENST00000360428 SPANXCQ9NY87 97 aa4.97□□□□□ -1.61
DSC3-201ENST00000360428 MRPS18CQ9Y3D5 142 aaKnown RBP4.97□□□□□ -1.61
DSC3-201ENST00000360428 LAMA1P25391 3075 aa4.97□□□□□ -1.61
DSC3-201ENST00000360428 TRAV14DV4A0A0A6YYC5 116 aa4.97□□□□□ -1.61
DSC3-201ENST00000360428 SAA1P0DJI8 122 aaPredicted RBP4.97□□□□□ -1.61
DSC3-201ENST00000360428 ARID1AO14497 2285 aa4.97□□□□□ -1.61
DSC3-201ENST00000360428 TRGV2A0A075B6R0 118 aa4.97□□□□□ -1.61
DSC3-201ENST00000360428 ATXN7O15265 892 aaPredicted RBP4.97□□□□□ -1.61
DSC3-201ENST00000360428 COX6A1P12074 109 aa4.97□□□□□ -1.61
DSC3-201ENST00000360428 DLX4Q92988 240 aaPredicted RBP4.97□□□□□ -1.61
DSC3-201ENST00000360428 IGKV1D-42A0A075B6H8 117 aa4.96□□□□□ -1.61
DSC3-201ENST00000360428 IGKV1D-33P01593 117 aa4.96□□□□□ -1.61
DSC3-201ENST00000360428 IGKV1-33P01594 117 aa4.96□□□□□ -1.61
DSC3-201ENST00000360428 TMEM249Q2WGJ8 235 aa4.96□□□□□ -1.61
DSC3-201ENST00000360428 ZIC4Q8N9L1 334 aa4.96□□□□□ -1.61
DSC3-201ENST00000360428 CTHRC1Q96CG8 243 aa4.96□□□□□ -1.61
DSC3-201ENST00000360428 VGLL1Q99990 258 aa4.96□□□□□ -1.61
DSC3-201ENST00000360428 C1QTNF5Q9BXJ0 243 aa4.96□□□□□ -1.61
DSC3-201ENST00000360428 CFHR5Q9BXR6 569 aa4.96□□□□□ -1.61
DSC3-201ENST00000360428 RNF222A6NCQ9 220 aa4.96□□□□□ -1.62
DSC3-201ENST00000360428 C15orf61A6NNL5 157 aa4.96□□□□□ -1.62
DSC3-201ENST00000360428 VWC2LB2RUY7 222 aa4.96□□□□□ -1.62
DSC3-201ENST00000360428 RAMP1O60894 148 aa4.96□□□□□ -1.62
DSC3-201ENST00000360428 CD7P09564 240 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms