RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 HTR1DP28221 377 aa10.19□□□□□ -0.78
COL20A1-201ENST00000358894 FAM162BQ5T6X4 162 aa10.19□□□□□ -0.78
COL20A1-201ENST00000358894 GBGT1Q8N5D6 347 aa10.19□□□□□ -0.78
COL20A1-201ENST00000358894 TMEM170AQ8WVE7 144 aa10.19□□□□□ -0.78
COL20A1-201ENST00000358894 MEGF9Q9H1U4 602 aa10.19□□□□□ -0.78
COL20A1-201ENST00000358894 RNF115Q9Y4L5 304 aa10.19□□□□□ -0.78
COL20A1-201ENST00000358894 KBTBD11-OT1A0A1B0GTJ5 212 aa10.18□□□□□ -0.78
COL20A1-201ENST00000358894 A0A1B0GUS0 222 aa10.18□□□□□ -0.78
COL20A1-201ENST00000358894 NUDT3O95989 172 aa10.18□□□□□ -0.78
COL20A1-201ENST00000358894 C1QTNF9P0C862 333 aa10.18□□□□□ -0.78
COL20A1-201ENST00000358894 CD40P25942 277 aa10.18□□□□□ -0.78
COL20A1-201ENST00000358894 PET117Q6UWS5 81 aa10.18□□□□□ -0.78
COL20A1-201ENST00000358894 TMEM14EPQ6UXP3 125 aa10.18□□□□□ -0.78
COL20A1-201ENST00000358894 C12orf54Q6X4T0 127 aa10.18□□□□□ -0.78
COL20A1-201ENST00000358894 SFRP2Q96HF1 295 aa10.18□□□□□ -0.78
COL20A1-201ENST00000358894 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.18□□□□□ -0.78
COL20A1-201ENST00000358894 TRBV24-1A0A075B6N3 115 aa10.18□□□□□ -0.78
COL20A1-201ENST00000358894 C19orf67A6NJJ6 358 aa10.18□□□□□ -0.78
COL20A1-201ENST00000358894 TNFSF13O75888 250 aa10.18□□□□□ -0.78
COL20A1-201ENST00000358894 CCL3L1P16619 93 aa10.18□□□□□ -0.78
COL20A1-201ENST00000358894 RND2P52198 227 aa10.18□□□□□ -0.78
COL20A1-201ENST00000358894 PRRX1P54821 245 aa10.18□□□□□ -0.78
COL20A1-201ENST00000358894 PRB3Q04118 309 aaPredicted RBP10.18□□□□□ -0.78
COL20A1-201ENST00000358894 DOLPP1Q86YN1 238 aa10.18□□□□□ -0.78
COL20A1-201ENST00000358894 H3BTX0 84 aa10.18□□□□□ -0.78
COL20A1-201ENST00000358894 PAXXQ9BUH6 204 aa10.18□□□□□ -0.78
COL20A1-201ENST00000358894 GNB4Q9HAV0 340 aa10.18□□□□□ -0.78
COL20A1-201ENST00000358894 OTOGLQ3ZCN5 2332 aa10.18□□□□□ -0.78
COL20A1-201ENST00000358894 TRAV3A0A0B4J244 114 aa10.18□□□□□ -0.78
COL20A1-201ENST00000358894 PMCHL1Q16048 86 aa10.18□□□□□ -0.78
COL20A1-201ENST00000358894 KRTCAP3Q53RY4 240 aa10.18□□□□□ -0.78
COL20A1-201ENST00000358894 BPIFA4PQ86YQ2 179 aa10.18□□□□□ -0.78
COL20A1-201ENST00000358894 SRRM5B3KS81 715 aa10.17□□□□□ -0.78
COL20A1-201ENST00000358894 ITGB1BP1O14713 200 aa10.17□□□□□ -0.78
COL20A1-201ENST00000358894 GNG7O60262 68 aa10.17□□□□□ -0.78
COL20A1-201ENST00000358894 NPIPB3Q92617 1050 aa10.17□□□□□ -0.78
COL20A1-201ENST00000358894 SFXN3Q9BWM7 321 aa10.17□□□□□ -0.78
COL20A1-201ENST00000358894 SSBP3Q9BWW4 388 aaPredicted RBP10.17□□□□□ -0.78
COL20A1-201ENST00000358894 WDR83OSQ9Y284 106 aa10.17□□□□□ -0.78
COL20A1-201ENST00000358894 TRAV1-1A0A0B4J248 108 aa10.17□□□□□ -0.78
COL20A1-201ENST00000358894 TEX50A0A1B0GTY4 177 aa10.17□□□□□ -0.78
COL20A1-201ENST00000358894 CRIP3Q6Q6R5 217 aa10.17□□□□□ -0.78
COL20A1-201ENST00000358894 TXNDC17Q9BRA2 123 aa10.17□□□□□ -0.78
COL20A1-201ENST00000358894 MBNL3Q9NUK0 354 aaKnown RBP10.17□□□□□ -0.78
COL20A1-201ENST00000358894 A0A1B0GW64 132 aa10.17□□□□□ -0.78
COL20A1-201ENST00000358894 YPEL1O60688 119 aa10.17□□□□□ -0.78
COL20A1-201ENST00000358894 UBE2V1Q13404 147 aa10.17□□□□□ -0.78
COL20A1-201ENST00000358894 OR8A1Q8NGG7 326 aa10.17□□□□□ -0.78
COL20A1-201ENST00000358894 YPEL2Q96QA6 119 aa10.17□□□□□ -0.78
COL20A1-201ENST00000358894 MALRD1Q5VYJ5 2156 aa10.16□□□□□ -0.78
COL20A1-201ENST00000358894 LRP4O75096 1905 aa10.16□□□□□ -0.78
COL20A1-201ENST00000358894 SAMD13Q5VXD3 122 aa10.16□□□□□ -0.78
COL20A1-201ENST00000358894 FAM90A2PQ658T7 463 aa10.16□□□□□ -0.78
COL20A1-201ENST00000358894 NUP210LQ5VU65 1888 aa10.16□□□□□ -0.78
COL20A1-201ENST00000358894 VENTXO95231 258 aa10.16□□□□□ -0.78
COL20A1-201ENST00000358894 CSN1S1P47710 185 aa10.16□□□□□ -0.78
COL20A1-201ENST00000358894 MIR17HGQ75NE6 70 aa10.16□□□□□ -0.78
COL20A1-201ENST00000358894 OR8B3Q8NGG8 313 aa10.16□□□□□ -0.78
COL20A1-201ENST00000358894 FOXA3P55318 350 aaPredicted RBP10.16□□□□□ -0.78
COL20A1-201ENST00000358894 CENPWQ5EE01 88 aa10.16□□□□□ -0.78
COL20A1-201ENST00000358894 IBA57Q5T440 356 aaKnown RBP10.16□□□□□ -0.78
COL20A1-201ENST00000358894 PEAR1Q5VY43 1037 aaPredicted RBP10.16□□□□□ -0.78
COL20A1-201ENST00000358894 WDR31Q8NA23 367 aa10.16□□□□□ -0.78
COL20A1-201ENST00000358894 DERL1Q9BUN8 251 aa10.16□□□□□ -0.78
COL20A1-201ENST00000358894 A6NDN8 102 aa10.15□□□□□ -0.78
COL20A1-201ENST00000358894 C8orf88P0DMB2 117 aa10.15□□□□□ -0.78
COL20A1-201ENST00000358894 MYOD1P15172 320 aa10.15□□□□□ -0.78
COL20A1-201ENST00000358894 RPL27AP46776 148 aaKnown RBP10.15□□□□□ -0.78
COL20A1-201ENST00000358894 CLEC2AQ6UVW9 174 aa10.15□□□□□ -0.78
COL20A1-201ENST00000358894 Q6ZSR3 168 aa10.15□□□□□ -0.78
COL20A1-201ENST00000358894 MMD2Q8IY49 270 aa10.15□□□□□ -0.78
COL20A1-201ENST00000358894 OR8B2Q96RD0 313 aa10.15□□□□□ -0.78
COL20A1-201ENST00000358894 MRPL20Q9BYC9 149 aaKnown RBP10.15□□□□□ -0.78
COL20A1-201ENST00000358894 PLSCR4Q9NRQ2 329 aa10.15□□□□□ -0.78
COL20A1-201ENST00000358894 SPG11Q96JI7 2443 aa10.15□□□□□ -0.78
COL20A1-201ENST00000358894 NPIPB11E5RHQ5 1161 aa10.15□□□□□ -0.78
COL20A1-201ENST00000358894 ISLRO14498 428 aa10.15□□□□□ -0.78
COL20A1-201ENST00000358894 SLC25A34Q6PIV7 304 aa10.15□□□□□ -0.78
COL20A1-201ENST00000358894 TREML4Q6UXN2 200 aa10.15□□□□□ -0.78
COL20A1-201ENST00000358894 IGKV1D-17A0A075B6S4 117 aa10.15□□□□□ -0.79
COL20A1-201ENST00000358894 DLL1O00548 723 aa10.15□□□□□ -0.79
COL20A1-201ENST00000358894 MOSP00540 346 aa10.15□□□□□ -0.79
COL20A1-201ENST00000358894 PRR31Q5SQ13 230 aa10.15□□□□□ -0.79
COL20A1-201ENST00000358894 FAM90A1Q86YD7 464 aa10.15□□□□□ -0.79
COL20A1-201ENST00000358894 OR4C13Q8NGP0 309 aa10.15□□□□□ -0.79
COL20A1-201ENST00000358894 RALYQ9UKM9 306 aaKnown RBP10.15□□□□□ -0.79
COL20A1-201ENST00000358894 IGKV3-15P01624 115 aa10.14□□□□□ -0.79
COL20A1-201ENST00000358894 FAM87AP0C7U9 286 aa10.14□□□□□ -0.79
COL20A1-201ENST00000358894 GNB2P62879 340 aa10.14□□□□□ -0.79
COL20A1-201ENST00000358894 RELBQ01201 579 aa10.14□□□□□ -0.79
COL20A1-201ENST00000358894 BSPH1Q075Z2 132 aa10.14□□□□□ -0.79
COL20A1-201ENST00000358894 GAGE1Q13065 139 aa10.14□□□□□ -0.79
COL20A1-201ENST00000358894 Q6ZR03 302 aa10.14□□□□□ -0.79
COL20A1-201ENST00000358894 ABHD17AQ96GS6 310 aa10.14□□□□□ -0.79
COL20A1-201ENST00000358894 MUC6Q6W4X9 2439 aa10.14□□□□□ -0.79
COL20A1-201ENST00000358894 OR2J3O76001 311 aa10.14□□□□□ -0.79
COL20A1-201ENST00000358894 NMUP48645 174 aa10.14□□□□□ -0.79
COL20A1-201ENST00000358894 TPTE2P1Q5T6R2 138 aa10.14□□□□□ -0.79
COL20A1-201ENST00000358894 PERPQ96FX8 193 aa10.14□□□□□ -0.79
COL20A1-201ENST00000358894 MAP1LC3CQ9BXW4 147 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms