RNA–Protein interactions for RNA: ENST00000358694.10

CTNND1-201, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-201ENST00000358694 MAP1BP46821 2468 aaKnown RBP7.44□□□□□ -1.22
CTNND1-201ENST00000358694 DEFB130BP0DP73 79 aa7.44□□□□□ -1.22
CTNND1-201ENST00000358694 DEFB130AP0DP74 79 aa7.44□□□□□ -1.22
CTNND1-201ENST00000358694 ATP5G3P48201 142 aa7.44□□□□□ -1.22
CTNND1-201ENST00000358694 RNF114Q9Y508 228 aa7.44□□□□□ -1.22
CTNND1-201ENST00000358694 ANKRD36CQ5JPF3 1778 aa7.44□□□□□ -1.22
CTNND1-201ENST00000358694 LYNX1G3V0Z9 82 aa7.44□□□□□ -1.22
CTNND1-201ENST00000358694 ZNF561-AS1K7EIQ3 104 aa7.44□□□□□ -1.22
CTNND1-201ENST00000358694 LYNX1P0DP58 116 aa7.44□□□□□ -1.22
CTNND1-201ENST00000358694 C1orf100Q5SVJ3 147 aa7.44□□□□□ -1.22
CTNND1-201ENST00000358694 ASPHD2Q6ICH7 369 aa7.44□□□□□ -1.22
CTNND1-201ENST00000358694 TTC3P53804 2025 aa7.43□□□□□ -1.22
CTNND1-201ENST00000358694 NPIPB13A6NJU9 1138 aa7.43□□□□□ -1.22
CTNND1-201ENST00000358694 NPIPB5A8MRT5 1133 aa7.43□□□□□ -1.22
CTNND1-201ENST00000358694 HLA-DQB1P01920 261 aa7.43□□□□□ -1.22
CTNND1-201ENST00000358694 ANXA2RQ3ZCQ2 193 aa7.43□□□□□ -1.22
CTNND1-201ENST00000358694 TEX43Q6ZNM6 134 aa7.43□□□□□ -1.22
CTNND1-201ENST00000358694 ATP5L2Q7Z4Y8 100 aa7.43□□□□□ -1.22
CTNND1-201ENST00000358694 C1orf159Q96HA4 380 aa7.43□□□□□ -1.22
CTNND1-201ENST00000358694 ZNF660Q6AZW8 331 aaPredicted RBP7.43□□□□□ -1.22
CTNND1-201ENST00000358694 POC1AQ8NBT0 407 aa7.43□□□□□ -1.22
CTNND1-201ENST00000358694 OR9G9P0C7N8 305 aa7.43□□□□□ -1.22
CTNND1-201ENST00000358694 PRTN3P24158 256 aa7.43□□□□□ -1.22
CTNND1-201ENST00000358694 NKAPP1Q8N9T2 125 aa7.43□□□□□ -1.22
CTNND1-201ENST00000358694 RNF166Q96A37 237 aaPredicted RBP7.43□□□□□ -1.22
CTNND1-201ENST00000358694 DNAJC30Q96LL9 226 aa7.43□□□□□ -1.22
CTNND1-201ENST00000358694 COX11Q9Y6N1 276 aa7.43□□□□□ -1.22
CTNND1-201ENST00000358694 ICE1Q9Y2F5 2266 aa7.43□□□□□ -1.22
CTNND1-201ENST00000358694 LEPROTO15243 131 aa7.43□□□□□ -1.22
CTNND1-201ENST00000358694 CD160O95971 181 aa7.43□□□□□ -1.22
CTNND1-201ENST00000358694 RFPL3SP0C7P2 107 aa7.43□□□□□ -1.22
CTNND1-201ENST00000358694 RCC1LQ96I51 464 aaKnown RBP7.43□□□□□ -1.22
CTNND1-201ENST00000358694 C1QTNF4Q9BXJ3 329 aa7.43□□□□□ -1.22
CTNND1-201ENST00000358694 TMEM133Q9H2Q1 129 aa7.43□□□□□ -1.22
CTNND1-201ENST00000358694 NRN1Q9NPD7 142 aa7.43□□□□□ -1.22
CTNND1-201ENST00000358694 UBR2Q8IWV8 1755 aa7.43□□□□□ -1.22
CTNND1-201ENST00000358694 TNFRSF6BO95407 300 aa7.43□□□□□ -1.22
CTNND1-201ENST00000358694 PRB4P10163 310 aaPredicted RBP7.43□□□□□ -1.22
CTNND1-201ENST00000358694 PSG8Q9UQ74 426 aa7.42□□□□□ -1.22
CTNND1-201ENST00000358694 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.42□□□□□ -1.22
CTNND1-201ENST00000358694 LCNL1Q6ZST4 164 aa7.42□□□□□ -1.22
CTNND1-201ENST00000358694 TMEM219Q86XT9 240 aa7.42□□□□□ -1.22
CTNND1-201ENST00000358694 KLHL30-AS1Q8NEE0 82 aa7.42□□□□□ -1.22
CTNND1-201ENST00000358694 MGST2Q99735 147 aa7.42□□□□□ -1.22
CTNND1-201ENST00000358694 PILRAQ9UKJ1 303 aa7.42□□□□□ -1.22
CTNND1-201ENST00000358694 SAA2-SAA4A0A096LPE2 208 aa7.42□□□□□ -1.22
CTNND1-201ENST00000358694 NDUFS5O43920 106 aa7.42□□□□□ -1.22
CTNND1-201ENST00000358694 SAA2P0DJI9 122 aaPredicted RBP7.42□□□□□ -1.22
CTNND1-201ENST00000358694 IRF3Q14653 427 aa7.42□□□□□ -1.22
CTNND1-201ENST00000358694 OCIAD2Q56VL3 154 aa7.42□□□□□ -1.22
CTNND1-201ENST00000358694 BHLHA9Q7RTU4 235 aa7.42□□□□□ -1.22
CTNND1-201ENST00000358694 RNASE7Q9H1E1 156 aaKnown RBP7.42□□□□□ -1.22
CTNND1-201ENST00000358694 MRPS18AQ9NVS2 196 aaKnown RBP7.42□□□□□ -1.22
CTNND1-201ENST00000358694 TRAV13-1A0A0B4J241 112 aa7.41□□□□□ -1.22
CTNND1-201ENST00000358694 IGHV1-2P23083 117 aa7.41□□□□□ -1.22
CTNND1-201ENST00000358694 PRDM13Q9H4Q3 707 aa7.41□□□□□ -1.22
CTNND1-201ENST00000358694 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.41□□□□□ -1.22
CTNND1-201ENST00000358694 TIMM23O14925 209 aa7.41□□□□□ -1.22
CTNND1-201ENST00000358694 PRCDQ00LT1 54 aa7.41□□□□□ -1.22
CTNND1-201ENST00000358694 OVOL2Q9BRP0 275 aa7.41□□□□□ -1.22
CTNND1-201ENST00000358694 DMRT1Q9Y5R6 373 aa7.41□□□□□ -1.22
CTNND1-201ENST00000358694 UPK2O00526 184 aa7.41□□□□□ -1.22
CTNND1-201ENST00000358694 PPBPP02775 128 aa7.41□□□□□ -1.22
CTNND1-201ENST00000358694 NMBP08949 121 aa7.41□□□□□ -1.22
CTNND1-201ENST00000358694 FUT5Q11128 374 aa7.41□□□□□ -1.22
CTNND1-201ENST00000358694 ZNF474Q6S9Z5 364 aaPredicted RBP7.41□□□□□ -1.22
CTNND1-201ENST00000358694 RASL11AQ6T310 242 aa7.41□□□□□ -1.22
CTNND1-201ENST00000358694 LAGE3Q14657 143 aa7.41□□□□□ -1.22
CTNND1-201ENST00000358694 FAM90A1Q86YD7 464 aa7.41□□□□□ -1.22
CTNND1-201ENST00000358694 LSM4Q9Y4Z0 139 aaKnown RBP7.41□□□□□ -1.22
CTNND1-201ENST00000358694 F2Z2F3 143 aa7.41□□□□□ -1.22
CTNND1-201ENST00000358694 F5H768 121 aa7.41□□□□□ -1.22
CTNND1-201ENST00000358694 CD5LO43866 347 aa7.41□□□□□ -1.22
CTNND1-201ENST00000358694 GAGE2BQ13066 116 aa7.41□□□□□ -1.22
CTNND1-201ENST00000358694 GAGE2AQ6NT46 116 aa7.41□□□□□ -1.22
CTNND1-201ENST00000358694 PLEKHB2Q96CS7 222 aa7.41□□□□□ -1.22
CTNND1-201ENST00000358694 ZNF479Q96JC4 524 aa7.41□□□□□ -1.22
CTNND1-201ENST00000358694 EPDR1Q9UM22 224 aa7.41□□□□□ -1.22
CTNND1-201ENST00000358694 NINQ8N4C6 2090 aa7.41□□□□□ -1.22
CTNND1-201ENST00000358694 LAMB4A4D0S4 1761 aa7.4□□□□□ -1.22
CTNND1-201ENST00000358694 SEC11AP67812 179 aa7.4□□□□□ -1.22
CTNND1-201ENST00000358694 C1orf122Q6ZSJ8 110 aa7.4□□□□□ -1.22
CTNND1-201ENST00000358694 FAM181AQ8N9Y4 354 aa7.4□□□□□ -1.22
CTNND1-201ENST00000358694 CFHR5Q9BXR6 569 aa7.4□□□□□ -1.22
CTNND1-201ENST00000358694 C15orf61A6NNL5 157 aa7.4□□□□□ -1.22
CTNND1-201ENST00000358694 C9orf106Q8NAJ2 232 aa7.4□□□□□ -1.22
CTNND1-201ENST00000358694 TRBV5-7A0A0A0MS05 114 aa7.4□□□□□ -1.22
CTNND1-201ENST00000358694 CD5P06127 495 aa7.4□□□□□ -1.22
CTNND1-201ENST00000358694 GATA4P43694 442 aa7.4□□□□□ -1.22
CTNND1-201ENST00000358694 PSG7Q13046 419 aa7.4□□□□□ -1.22
CTNND1-201ENST00000358694 GAGE13Q4V321 117 aa7.4□□□□□ -1.22
CTNND1-201ENST00000358694 SPRED2Q7Z698 418 aa7.4□□□□□ -1.22
CTNND1-201ENST00000358694 ZCCHC24Q8N2G6 241 aaKnown RBP7.4□□□□□ -1.22
CTNND1-201ENST00000358694 TOGARAM1Q9Y4F4 1720 aa7.4□□□□□ -1.22
CTNND1-201ENST00000358694 AHDC1Q5TGY3 1603 aaPredicted RBP7.4□□□□□ -1.23
CTNND1-201ENST00000358694 TRAV8-3A0A0A6YYJ7 113 aa7.4□□□□□ -1.23
CTNND1-201ENST00000358694 LIMS1P48059 325 aa7.4□□□□□ -1.23
CTNND1-201ENST00000358694 FOXL1Q12952 345 aa7.4□□□□□ -1.23
CTNND1-201ENST00000358694 C2orf82Q6UX34 121 aa7.4□□□□□ -1.23
CTNND1-201ENST00000358694 VMO1Q7Z5L0 202 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms