RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 CST9LQ9H4G1 147 aa4.66□□□□□ -1.66
PTPRD-202ENST00000356435 CACNA1GO43497 2377 aa4.66□□□□□ -1.66
PTPRD-202ENST00000356435 RALGAPA2Q2PPJ7 1873 aa4.65□□□□□ -1.66
PTPRD-202ENST00000356435 MST1P26927 711 aa4.65□□□□□ -1.66
PTPRD-202ENST00000356435 EFNA4P52798 201 aa4.65□□□□□ -1.66
PTPRD-202ENST00000356435 ANK1P16157 1881 aa4.65□□□□□ -1.66
PTPRD-202ENST00000356435 SAA2-SAA4A0A096LPE2 208 aa4.65□□□□□ -1.66
PTPRD-202ENST00000356435 OVOL1O14753 267 aa4.65□□□□□ -1.66
PTPRD-202ENST00000356435 SAA2P0DJI9 122 aaPredicted RBP4.65□□□□□ -1.66
PTPRD-202ENST00000356435 TDGF1P3P51864 188 aa4.65□□□□□ -1.66
PTPRD-202ENST00000356435 OR2K2Q8NGT1 345 aa4.65□□□□□ -1.66
PTPRD-202ENST00000356435 CACNG8Q8WXS5 425 aa4.65□□□□□ -1.66
PTPRD-202ENST00000356435 Q9H3A6 140 aa4.65□□□□□ -1.66
PTPRD-202ENST00000356435 ZNF257Q9Y2Q1 563 aa4.65□□□□□ -1.66
PTPRD-202ENST00000356435 MRPS18CQ9Y3D5 142 aaKnown RBP4.65□□□□□ -1.66
PTPRD-202ENST00000356435 SCN1AP35498 2009 aa4.65□□□□□ -1.66
PTPRD-202ENST00000356435 TRAV8-6A0A0B4J262 113 aa4.65□□□□□ -1.66
PTPRD-202ENST00000356435 VENTXO95231 258 aa4.65□□□□□ -1.66
PTPRD-202ENST00000356435 CFHR1Q03591 330 aa4.65□□□□□ -1.66
PTPRD-202ENST00000356435 SAA1P0DJI8 122 aaPredicted RBP4.65□□□□□ -1.66
PTPRD-202ENST00000356435 SRD5A1P18405 259 aa4.65□□□□□ -1.66
PTPRD-202ENST00000356435 TBL2Q9Y4P3 447 aaKnown RBP4.65□□□□□ -1.66
PTPRD-202ENST00000356435 DOCK5Q9H7D0 1870 aa4.65□□□□□ -1.67
PTPRD-202ENST00000356435 A0A087WWC5 75 aa4.65□□□□□ -1.67
PTPRD-202ENST00000356435 IGHV1-2P23083 117 aa4.65□□□□□ -1.67
PTPRD-202ENST00000356435 LTBRP36941 435 aa4.65□□□□□ -1.67
PTPRD-202ENST00000356435 RHOGP84095 191 aa4.65□□□□□ -1.67
PTPRD-202ENST00000356435 TBR1Q16650 682 aa4.65□□□□□ -1.67
PTPRD-202ENST00000356435 SIGLEC15Q6ZMC9 328 aa4.65□□□□□ -1.67
PTPRD-202ENST00000356435 TTC9CQ8N5M4 171 aa4.65□□□□□ -1.67
PTPRD-202ENST00000356435 RNF182Q8N6D2 247 aa4.65□□□□□ -1.67
PTPRD-202ENST00000356435 VCX2Q9H322 139 aa4.65□□□□□ -1.67
PTPRD-202ENST00000356435 TRAV21A0A0B4J279 112 aa4.65□□□□□ -1.67
PTPRD-202ENST00000356435 A0A1B0GUT8 65 aa4.65□□□□□ -1.67
PTPRD-202ENST00000356435 B4DSR2 109 aa4.65□□□□□ -1.67
PTPRD-202ENST00000356435 NBEAP1P0C6P0 100 aa4.65□□□□□ -1.67
PTPRD-202ENST00000356435 SLC25A16P16260 332 aa4.65□□□□□ -1.67
PTPRD-202ENST00000356435 CEACAM8P31997 349 aaPredicted RBP4.65□□□□□ -1.67
PTPRD-202ENST00000356435 CKS1BP61024 79 aa4.65□□□□□ -1.67
PTPRD-202ENST00000356435 TMEM105Q8N8V8 129 aa4.65□□□□□ -1.67
PTPRD-202ENST00000356435 OR5A1Q8NGJ0 315 aa4.65□□□□□ -1.67
PTPRD-202ENST00000356435 WDYHV1Q96HA8 205 aa4.65□□□□□ -1.67
PTPRD-202ENST00000356435 COL4A5P29400 1685 aa4.65□□□□□ -1.67
PTPRD-202ENST00000356435 CACNA1CQ13936 2221 aa4.65□□□□□ -1.67
PTPRD-202ENST00000356435 PRR32B1ATL7 298 aa4.65□□□□□ -1.67
PTPRD-202ENST00000356435 TIAF1O95411 115 aa4.65□□□□□ -1.67
PTPRD-202ENST00000356435 FHITP49789 147 aa4.65□□□□□ -1.67
PTPRD-202ENST00000356435 ASPHD2Q6ICH7 369 aa4.65□□□□□ -1.67
PTPRD-202ENST00000356435 GTF3AQ92664 365 aaKnown RBP4.65□□□□□ -1.67
PTPRD-202ENST00000356435 C1QTNF4Q9BXJ3 329 aa4.65□□□□□ -1.67
PTPRD-202ENST00000356435 ADARB2-AS1A8MUL3 147 aa4.65□□□□□ -1.67
PTPRD-202ENST00000356435 ZNF506Q5JVG8 444 aa4.65□□□□□ -1.67
PTPRD-202ENST00000356435 UNQ6494/PRO21346Q6UXR6 183 aa4.65□□□□□ -1.67
PTPRD-202ENST00000356435 C9orf106Q8NAJ2 232 aa4.65□□□□□ -1.67
PTPRD-202ENST00000356435 C1QTNF5Q9BXJ0 243 aa4.65□□□□□ -1.67
PTPRD-202ENST00000356435 SLC25A15Q9Y619 301 aa4.65□□□□□ -1.67
PTPRD-202ENST00000356435 A0A087WX48 190 aa4.64□□□□□ -1.67
PTPRD-202ENST00000356435 INSP01308 110 aa4.64□□□□□ -1.67
PTPRD-202ENST00000356435 FNDC1Q4ZHG4 1894 aaPredicted RBP4.64□□□□□ -1.67
PTPRD-202ENST00000356435 RNF125Q96EQ8 232 aa4.64□□□□□ -1.67
PTPRD-202ENST00000356435 AMELYQ99218 206 aa4.64□□□□□ -1.67
PTPRD-202ENST00000356435 SEPSECSQ9HD40 501 aaKnown RBP4.64□□□□□ -1.67
PTPRD-202ENST00000356435 TSC2P49815 1807 aa4.64□□□□□ -1.67
PTPRD-202ENST00000356435 GREM1O60565 184 aa4.64□□□□□ -1.67
PTPRD-202ENST00000356435 APOHP02749 345 aaPredicted RBP4.64□□□□□ -1.67
PTPRD-202ENST00000356435 RND3P61587 244 aa4.64□□□□□ -1.67
PTPRD-202ENST00000356435 FAM89BQ8N5H3 189 aa4.64□□□□□ -1.67
PTPRD-202ENST00000356435 C5orf66Q9H5L9 145 aa4.64□□□□□ -1.67
PTPRD-202ENST00000356435 MSGN1A6NI15 193 aa4.64□□□□□ -1.67
PTPRD-202ENST00000356435 IGHV3-48P01763 117 aa4.64□□□□□ -1.67
PTPRD-202ENST00000356435 C2orf68Q2NKX9 166 aa4.64□□□□□ -1.67
PTPRD-202ENST00000356435 SPAG17Q6Q759 2223 aa4.64□□□□□ -1.67
PTPRD-202ENST00000356435 IGHV2-5P01817 119 aa4.64□□□□□ -1.67
PTPRD-202ENST00000356435 DNAJC13O75165 2243 aa4.64□□□□□ -1.67
PTPRD-202ENST00000356435 PDCD11Q14690 1871 aaKnown RBP4.64□□□□□ -1.67
PTPRD-202ENST00000356435 IGKV1D-42A0A075B6H8 117 aa4.64□□□□□ -1.67
PTPRD-202ENST00000356435 A0A0G2JMM0 328 aa4.64□□□□□ -1.67
PTPRD-202ENST00000356435 A0A1W2PPB8 328 aa4.64□□□□□ -1.67
PTPRD-202ENST00000356435 A0A1W2PRS3 328 aa4.64□□□□□ -1.67
PTPRD-202ENST00000356435 KIR3DP1A8MWS1 328 aa4.64□□□□□ -1.67
PTPRD-202ENST00000356435 TMEM50AO95807 157 aa4.64□□□□□ -1.67
PTPRD-202ENST00000356435 LYL1P12980 280 aa4.64□□□□□ -1.67
PTPRD-202ENST00000356435 EGR4Q05215 589 aa4.64□□□□□ -1.67
PTPRD-202ENST00000356435 PAX8Q06710 450 aa4.64□□□□□ -1.67
PTPRD-202ENST00000356435 ORMDL3Q8N138 153 aa4.64□□□□□ -1.67
PTPRD-202ENST00000356435 VMO1Q7Z5L0 202 aa4.64□□□□□ -1.67
PTPRD-202ENST00000356435 IGFBP2P18065 325 aa4.64□□□□□ -1.67
PTPRD-202ENST00000356435 PAX2Q02962 417 aa4.64□□□□□ -1.67
PTPRD-202ENST00000356435 MESP2Q0VG99 397 aa4.64□□□□□ -1.67
PTPRD-202ENST00000356435 MORN3Q6PF18 240 aaPredicted RBP4.64□□□□□ -1.67
PTPRD-202ENST00000356435 BIVMQ86UB2 503 aa4.64□□□□□ -1.67
PTPRD-202ENST00000356435 TNFRSF14Q92956 283 aa4.64□□□□□ -1.67
PTPRD-202ENST00000356435 C18orf15Q96N68 181 aa4.64□□□□□ -1.67
PTPRD-202ENST00000356435 CYSLTR1Q9Y271 337 aa4.64□□□□□ -1.67
PTPRD-202ENST00000356435 IGHV3OR16-8A0A075B7F1 116 aa4.63□□□□□ -1.67
PTPRD-202ENST00000356435 IGLV3-19P01714 112 aa4.63□□□□□ -1.67
PTPRD-202ENST00000356435 TYMSP04818 313 aa4.63□□□□□ -1.67
PTPRD-202ENST00000356435 FAM201AQ5SY85 155 aa4.63□□□□□ -1.67
PTPRD-202ENST00000356435 PEF1Q9UBV8 284 aaKnown RBP4.63□□□□□ -1.67
PTPRD-202ENST00000356435 MDKP21741 143 aaPredicted RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms