RNA–Protein interactions for RNA: ENST00000350773.8

TSC2-202, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSC2, Length 5,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-202ENST00000350773 VSIRQ9H7M9 311 aa13.4□□□□□ -0.26
TSC2-202ENST00000350773 C21orf62Q9NYP8 219 aa13.4□□□□□ -0.26
TSC2-202ENST00000350773 NAPSAO96009 420 aa13.4□□□□□ -0.26
TSC2-202ENST00000350773 MTURNQ8N3F0 131 aa13.4□□□□□ -0.26
TSC2-202ENST00000350773 RP1P56715 2156 aa13.4□□□□□ -0.26
TSC2-202ENST00000350773 NABP1Q96AH0 204 aa13.4□□□□□ -0.26
TSC2-202ENST00000350773 IGHV3-35A0A0C4DH35 117 aa13.39□□□□□ -0.27
TSC2-202ENST00000350773 RRN3P1Q2M238 152 aa13.39□□□□□ -0.27
TSC2-202ENST00000350773 FAM74A4Q5TZK3 123 aa13.39□□□□□ -0.27
TSC2-202ENST00000350773 CXCL1P09341 107 aa13.39□□□□□ -0.27
TSC2-202ENST00000350773 ASIPP42127 132 aa13.39□□□□□ -0.27
TSC2-202ENST00000350773 SNRPD3P62318 126 aaKnown RBP13.39□□□□□ -0.27
TSC2-202ENST00000350773 FBXL7Q9UJT9 491 aa13.39□□□□□ -0.27
TSC2-202ENST00000350773 FOXH1O75593 365 aa13.39□□□□□ -0.27
TSC2-202ENST00000350773 IGKV1D-33P01593 117 aa13.39□□□□□ -0.27
TSC2-202ENST00000350773 IGKV1-33P01594 117 aa13.39□□□□□ -0.27
TSC2-202ENST00000350773 LTBRP36941 435 aa13.39□□□□□ -0.27
TSC2-202ENST00000350773 FER1L6-AS1Q8NA97 138 aa13.39□□□□□ -0.27
TSC2-202ENST00000350773 OCC1Q8TAD7 63 aa13.39□□□□□ -0.27
TSC2-202ENST00000350773 OR9G9P0C7N8 305 aa13.39□□□□□ -0.27
TSC2-202ENST00000350773 TEX38Q6PEX7 206 aa13.39□□□□□ -0.27
TSC2-202ENST00000350773 ZIC4Q8N9L1 334 aa13.39□□□□□ -0.27
TSC2-202ENST00000350773 EFNA2O43921 213 aa13.38□□□□□ -0.27
TSC2-202ENST00000350773 DUTP33316 252 aaKnown RBP13.38□□□□□ -0.27
TSC2-202ENST00000350773 EFNB3Q15768 340 aa13.38□□□□□ -0.27
TSC2-202ENST00000350773 TET1Q8NFU7 2136 aa13.38□□□□□ -0.27
TSC2-202ENST00000350773 FOXC2Q99958 501 aa13.38□□□□□ -0.27
TSC2-202ENST00000350773 WDR90Q96KV7 1748 aa13.38□□□□□ -0.27
TSC2-202ENST00000350773 IGHV3-23P01764 117 aa13.38□□□□□ -0.27
TSC2-202ENST00000350773 C9orf106Q8NAJ2 232 aa13.38□□□□□ -0.27
TSC2-202ENST00000350773 ARPC1AQ92747 370 aa13.38□□□□□ -0.27
TSC2-202ENST00000350773 EPDR1Q9UM22 224 aa13.38□□□□□ -0.27
TSC2-202ENST00000350773 PRCDQ00LT1 54 aa13.38□□□□□ -0.27
TSC2-202ENST00000350773 LY6EQ16553 131 aa13.38□□□□□ -0.27
TSC2-202ENST00000350773 TCRBV4S1A1TA0A5B7 111 aa13.38□□□□□ -0.27
TSC2-202ENST00000350773 PDLIM4P50479 330 aa13.38□□□□□ -0.27
TSC2-202ENST00000350773 BSPH1Q075Z2 132 aa13.38□□□□□ -0.27
TSC2-202ENST00000350773 FGFBP3Q8TAT2 258 aa13.38□□□□□ -0.27
TSC2-202ENST00000350773 DEPPQ9NTK1 212 aa13.38□□□□□ -0.27
TSC2-202ENST00000350773 PRR19A6NJB7 356 aa13.37□□□□□ -0.27
TSC2-202ENST00000350773 C19orf67A6NJJ6 358 aa13.37□□□□□ -0.27
TSC2-202ENST00000350773 C17orf100A8MU93 164 aa13.37□□□□□ -0.27
TSC2-202ENST00000350773 SNAI2O43623 268 aa13.37□□□□□ -0.27
TSC2-202ENST00000350773 CLPSP04118 112 aa13.37□□□□□ -0.27
TSC2-202ENST00000350773 GNG5P63218 68 aa13.37□□□□□ -0.27
TSC2-202ENST00000350773 GEMIN7Q9H840 131 aaKnown RBP13.37□□□□□ -0.27
TSC2-202ENST00000350773 MRPL16Q9NX20 251 aaKnown RBP13.37□□□□□ -0.27
TSC2-202ENST00000350773 TTC32Q5I0X7 151 aa13.37□□□□□ -0.27
TSC2-202ENST00000350773 CLDN16Q9Y5I7 305 aa13.37□□□□□ -0.27
TSC2-202ENST00000350773 TRAV9-2A0A087WT02 112 aa13.37□□□□□ -0.27
TSC2-202ENST00000350773 SCGB3A1Q96QR1 104 aa13.37□□□□□ -0.27
TSC2-202ENST00000350773 TRGV3P03979 118 aa13.37□□□□□ -0.27
TSC2-202ENST00000350773 GPR183P32249 361 aa13.37□□□□□ -0.27
TSC2-202ENST00000350773 CD69Q07108 199 aa13.37□□□□□ -0.27
TSC2-202ENST00000350773 FAM57AQ8TBR7 257 aa13.37□□□□□ -0.27
TSC2-202ENST00000350773 ZSWIM8A7E2V4 1837 aa13.37□□□□□ -0.27
TSC2-202ENST00000350773 S4R3C0 116 aa13.36□□□□□ -0.27
TSC2-202ENST00000350773 IGKV1-27A0A075B6S5 117 aa13.36□□□□□ -0.27
TSC2-202ENST00000350773 LINC01560Q8TB33 94 aa13.36□□□□□ -0.27
TSC2-202ENST00000350773 M0R381 172 aa13.36□□□□□ -0.27
TSC2-202ENST00000350773 TMEM170BQ5T4T1 132 aa13.36□□□□□ -0.27
TSC2-202ENST00000350773 PVRIGQ6DKI7 326 aa13.36□□□□□ -0.27
TSC2-202ENST00000350773 DUX5Q96PT3 197 aa13.36□□□□□ -0.27
TSC2-202ENST00000350773 IGHV3OR16-13A0A075B7E8 117 aa13.36□□□□□ -0.27
TSC2-202ENST00000350773 IGHV3-74A0A0B4J1X5 117 aa13.36□□□□□ -0.27
TSC2-202ENST00000350773 QRFPP83859 136 aa13.36□□□□□ -0.27
TSC2-202ENST00000350773 PPP1R27Q86WC6 154 aa13.36□□□□□ -0.27
TSC2-202ENST00000350773 TEX29Q8N6K0 151 aa13.36□□□□□ -0.27
TSC2-202ENST00000350773 ST6GALNAC3Q8NDV1 305 aa13.36□□□□□ -0.27
TSC2-202ENST00000350773 SPCS1Q9Y6A9 102 aa13.36□□□□□ -0.27
TSC2-202ENST00000350773 PGPEP1LA6NFU8 196 aa13.35□□□□□ -0.27
TSC2-202ENST00000350773 LYL1P12980 280 aa13.35□□□□□ -0.27
TSC2-202ENST00000350773 SSBP4Q9BWG4 385 aaPredicted RBP13.35□□□□□ -0.27
TSC2-202ENST00000350773 NMSQ5H8A3 153 aa13.35□□□□□ -0.27
TSC2-202ENST00000350773 PNRC2Q9NPJ4 139 aaKnown RBP13.35□□□□□ -0.27
TSC2-202ENST00000350773 GCSAMLQ5JQS6 135 aa13.35□□□□□ -0.27
TSC2-202ENST00000350773 MEIG1Q5JSS6 88 aa13.35□□□□□ -0.27
TSC2-202ENST00000350773 ALKBH7Q9BT30 221 aaPredicted RBP13.35□□□□□ -0.27
TSC2-202ENST00000350773 H7C1H1 209 aa13.35□□□□□ -0.27
TSC2-202ENST00000350773 IGHV3OR16-12A0A075B7B8 117 aa13.35□□□□□ -0.27
TSC2-202ENST00000350773 C9orf172C9J069 976 aa13.35□□□□□ -0.27
TSC2-202ENST00000350773 AMBPP02760 352 aa13.35□□□□□ -0.27
TSC2-202ENST00000350773 SCGB1A1P11684 91 aa13.35□□□□□ -0.27
TSC2-202ENST00000350773 NEU4Q8WWR8 484 aaPredicted RBP13.35□□□□□ -0.27
TSC2-202ENST00000350773 MRPS16Q9Y3D3 137 aaKnown RBP13.35□□□□□ -0.27
TSC2-202ENST00000350773 NPFFO15130 113 aa13.34□□□□□ -0.27
TSC2-202ENST00000350773 CEACAM4O75871 244 aa13.34□□□□□ -0.27
TSC2-202ENST00000350773 CCL3L1P16619 93 aa13.34□□□□□ -0.27
TSC2-202ENST00000350773 FOXL1Q12952 345 aa13.34□□□□□ -0.27
TSC2-202ENST00000350773 TREML4Q6UXN2 200 aa13.34□□□□□ -0.27
TSC2-202ENST00000350773 ALPK2Q86TB3 2170 aa13.34□□□□□ -0.27
TSC2-202ENST00000350773 MUC21A0A0G2JKD1 596 aa13.34□□□□□ -0.27
TSC2-202ENST00000350773 MUC21A0A140T8X8 626 aa13.34□□□□□ -0.27
TSC2-202ENST00000350773 STAG3L3P0CL85 134 aa13.34□□□□□ -0.27
TSC2-202ENST00000350773 TIMP3P35625 211 aa13.34□□□□□ -0.27
TSC2-202ENST00000350773 MUC21Q5SSG8 566 aa13.34□□□□□ -0.27
TSC2-202ENST00000350773 IGHV3-66A0A0C4DH42 116 aa13.34□□□□□ -0.27
TSC2-202ENST00000350773 ATXN7O15265 892 aaPredicted RBP13.34□□□□□ -0.27
TSC2-202ENST00000350773 LINC00614P0C842 121 aa13.34□□□□□ -0.27
TSC2-202ENST00000350773 PYYP10082 97 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms