RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 LYZL2Q7Z4W2 148 aa16.79■□□□□ 0.28
SNX3-202ENST00000349379 IGHV3-21A0A0B4J1V1 117 aa16.78■□□□□ 0.28
SNX3-202ENST00000349379 PIGBOS1A0A0B4J2F0 54 aa16.78■□□□□ 0.28
SNX3-202ENST00000349379 DUXBA0A1W2PPF3 345 aa16.78■□□□□ 0.28
SNX3-202ENST00000349379 A8MWP6 167 aa16.78■□□□□ 0.28
SNX3-202ENST00000349379 SFT2D2O95562 160 aa16.78■□□□□ 0.28
SNX3-202ENST00000349379 SULT1A3P0DMM9 295 aa16.78■□□□□ 0.28
SNX3-202ENST00000349379 SULT1A4P0DMN0 295 aa16.78■□□□□ 0.28
SNX3-202ENST00000349379 HOXA1P49639 335 aaPredicted RBP16.78■□□□□ 0.28
SNX3-202ENST00000349379 UBE2MP61081 183 aaKnown RBP16.78■□□□□ 0.28
SNX3-202ENST00000349379 PPP1R1AQ13522 171 aa16.78■□□□□ 0.28
SNX3-202ENST00000349379 BSCL2Q96G97 398 aaPredicted RBP16.78■□□□□ 0.28
SNX3-202ENST00000349379 CCDC32Q9BV29 185 aa16.78■□□□□ 0.28
SNX3-202ENST00000349379 ZNF436Q9C0F3 470 aaPredicted RBP16.78■□□□□ 0.28
SNX3-202ENST00000349379 LINC00854A0A1B0GVQ3 168 aa16.77■□□□□ 0.28
SNX3-202ENST00000349379 C2orf70A6NJV1 201 aa16.77■□□□□ 0.28
SNX3-202ENST00000349379 CENPXA8MT69 81 aa16.77■□□□□ 0.28
SNX3-202ENST00000349379 PLA2G10O15496 165 aa16.77■□□□□ 0.28
SNX3-202ENST00000349379 MT-CO2P00403 227 aa16.77■□□□□ 0.28
SNX3-202ENST00000349379 DCTN2Q13561 401 aaKnown RBP16.77■□□□□ 0.28
SNX3-202ENST00000349379 ANKRD55Q3KP44 614 aa16.77■□□□□ 0.28
SNX3-202ENST00000349379 SPSB3Q6PJ21 355 aa16.77■□□□□ 0.28
SNX3-202ENST00000349379 PLET1Q6UQ28 207 aa16.77■□□□□ 0.28
SNX3-202ENST00000349379 MISP3Q96FF7 219 aa16.77■□□□□ 0.28
SNX3-202ENST00000349379 ZC4H2Q9NQZ6 224 aa16.77■□□□□ 0.28
SNX3-202ENST00000349379 TMEM213A2RRL7 107 aa16.76■□□□□ 0.27
SNX3-202ENST00000349379 OR2T8A6NH00 312 aa16.76■□□□□ 0.27
SNX3-202ENST00000349379 GP9P14770 177 aa16.76■□□□□ 0.27
SNX3-202ENST00000349379 VAMP1P23763 118 aa16.76■□□□□ 0.27
SNX3-202ENST00000349379 ADMP35318 185 aa16.76■□□□□ 0.27
SNX3-202ENST00000349379 SNCAP37840 140 aa16.76■□□□□ 0.27
SNX3-202ENST00000349379 FAM106AQ4KMX7 169 aa16.76■□□□□ 0.27
SNX3-202ENST00000349379 UNQ9165/PRO28630Q6UXU0 137 aa16.76■□□□□ 0.27
SNX3-202ENST00000349379 ZNF414Q96IQ9 312 aa16.76■□□□□ 0.27
SNX3-202ENST00000349379 ENY2Q9NPA8 101 aa16.76■□□□□ 0.27
SNX3-202ENST00000349379 PTTG2Q9NZH5 202 aa16.76■□□□□ 0.27
SNX3-202ENST00000349379 CACFD1Q9UGQ2 172 aa16.76■□□□□ 0.27
SNX3-202ENST00000349379 EDN2P20800 178 aa16.75■□□□□ 0.27
SNX3-202ENST00000349379 SMCO1Q147U7 214 aa16.75■□□□□ 0.27
SNX3-202ENST00000349379 DEFB121Q5J5C9 76 aa16.75■□□□□ 0.27
SNX3-202ENST00000349379 TXN2Q99757 166 aa16.75■□□□□ 0.27
SNX3-202ENST00000349379 CHRDL1Q9BU40 450 aa16.75■□□□□ 0.27
SNX3-202ENST00000349379 BATF3Q9NR55 127 aa16.75■□□□□ 0.27
SNX3-202ENST00000349379 GAR1Q9NY12 217 aaKnown RBP16.75■□□□□ 0.27
SNX3-202ENST00000349379 FLVCR2Q9UPI3 526 aa16.75■□□□□ 0.27
SNX3-202ENST00000349379 A0A1B0GU03 582 aa16.74■□□□□ 0.27
SNX3-202ENST00000349379 CORTO00230 105 aa16.74■□□□□ 0.27
SNX3-202ENST00000349379 LY86O95711 162 aa16.74■□□□□ 0.27
SNX3-202ENST00000349379 SUB1P53999 127 aaKnown RBP eCLIP16.74■□□□□ 0.27
SNX3-202ENST00000349379 MFAP4P55083 255 aa16.74■□□□□ 0.27
SNX3-202ENST00000349379 OR2K2Q8NGT1 345 aa16.74■□□□□ 0.27
SNX3-202ENST00000349379 S100ZQ8WXG8 99 aa16.74■□□□□ 0.27
SNX3-202ENST00000349379 TMEM190Q8WZ59 177 aa16.74■□□□□ 0.27
SNX3-202ENST00000349379 HSPB7Q9UBY9 170 aa16.74■□□□□ 0.27
SNX3-202ENST00000349379 LYRM1O43325 122 aa16.73■□□□□ 0.27
SNX3-202ENST00000349379 PITX3O75364 302 aa16.73■□□□□ 0.27
SNX3-202ENST00000349379 CTSGP08311 255 aa16.73■□□□□ 0.27
SNX3-202ENST00000349379 FOLR2P14207 255 aa16.73■□□□□ 0.27
SNX3-202ENST00000349379 ELLP55199 621 aaPredicted RBP16.73■□□□□ 0.27
SNX3-202ENST00000349379 Q56UQ5 140 aa16.73■□□□□ 0.27
SNX3-202ENST00000349379 PINX1Q96BK5 328 aaKnown RBP16.73■□□□□ 0.27
SNX3-202ENST00000349379 IGHV3-35A0A0C4DH35 117 aa16.72■□□□□ 0.27
SNX3-202ENST00000349379 C9orf170A2RU37 121 aa16.72■□□□□ 0.27
SNX3-202ENST00000349379 C8orf88P0DMB2 117 aa16.72■□□□□ 0.27
SNX3-202ENST00000349379 SLC25A6P12236 298 aa16.72■□□□□ 0.27
SNX3-202ENST00000349379 CBLN1P23435 193 aa16.72■□□□□ 0.27
SNX3-202ENST00000349379 HTR2BP41595 481 aa16.72■□□□□ 0.27
SNX3-202ENST00000349379 TNFRSF9Q07011 255 aa16.72■□□□□ 0.27
SNX3-202ENST00000349379 UBAC2Q8NBM4 344 aa16.72■□□□□ 0.27
SNX3-202ENST00000349379 TMED3Q9Y3Q3 217 aa16.72■□□□□ 0.27
SNX3-202ENST00000349379 DNAH9Q9NYC9 4486 aa16.71■□□□□ 0.27
SNX3-202ENST00000349379 ZNF320A2RRD8 509 aa16.71■□□□□ 0.27
SNX3-202ENST00000349379 IZUMO1RA6ND01 250 aa16.71■□□□□ 0.27
SNX3-202ENST00000349379 CEBPZOSA8MTT3 80 aa16.71■□□□□ 0.27
SNX3-202ENST00000349379 NDUFA4O00483 81 aa16.71■□□□□ 0.27
SNX3-202ENST00000349379 IGHV3-48P01763 117 aa16.71■□□□□ 0.27
SNX3-202ENST00000349379 DEFB114Q30KQ6 69 aa16.71■□□□□ 0.27
SNX3-202ENST00000349379 C2orf83Q53S99 150 aa16.71■□□□□ 0.27
SNX3-202ENST00000349379 LCN12Q6JVE5 192 aa16.71■□□□□ 0.27
SNX3-202ENST00000349379 CACNG8Q8WXS5 425 aa16.71■□□□□ 0.27
SNX3-202ENST00000349379 B9D2Q9BPU9 175 aa16.71■□□□□ 0.27
SNX3-202ENST00000349379 FNDC4Q9H6D8 234 aaPredicted RBP16.71■□□□□ 0.27
SNX3-202ENST00000349379 PALMDQ9NP74 551 aa16.71■□□□□ 0.27
SNX3-202ENST00000349379 HEYLQ9NQ87 328 aaPredicted RBP16.71■□□□□ 0.27
SNX3-202ENST00000349379 TECRQ9NZ01 308 aaKnown RBP16.71■□□□□ 0.27
SNX3-202ENST00000349379 NXPH3O95157 252 aa16.7■□□□□ 0.26
SNX3-202ENST00000349379 OR4E1P0C645 316 aa16.7■□□□□ 0.26
SNX3-202ENST00000349379 DHRS2Q13268 280 aa16.7■□□□□ 0.26
SNX3-202ENST00000349379 CD300EQ496F6 205 aaPredicted RBP16.7■□□□□ 0.26
SNX3-202ENST00000349379 TM4SF20Q53R12 229 aa16.7■□□□□ 0.26
SNX3-202ENST00000349379 C11orf87Q6NUJ2 197 aa16.7■□□□□ 0.26
SNX3-202ENST00000349379 Q8N1Y9 231 aa16.7■□□□□ 0.26
SNX3-202ENST00000349379 SLC24A4Q8NFF2 622 aa16.7■□□□□ 0.26
SNX3-202ENST00000349379 TMEM170AQ8WVE7 144 aa16.7■□□□□ 0.26
SNX3-202ENST00000349379 MARC2Q969Z3 335 aa16.7■□□□□ 0.26
SNX3-202ENST00000349379 UFC1Q9Y3C8 167 aa16.7■□□□□ 0.26
SNX3-202ENST00000349379 NUPL2O15504 423 aaKnown RBP16.69■□□□□ 0.26
SNX3-202ENST00000349379 ANXA7P20073 488 aaKnown RBP16.69■□□□□ 0.26
SNX3-202ENST00000349379 LYG2Q86SG7 212 aa16.69■□□□□ 0.26
SNX3-202ENST00000349379 DUSP18Q8NEJ0 188 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms