RNA–Protein interactions for RNA: ENST00000344140.5

CACNB1-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene CACNB1, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-201ENST00000344140 TMEM144Q7Z5S9 345 aa17.48■□□□□ 0.39
CACNB1-201ENST00000344140 LYPD6BQ8NI32 183 aa17.48■□□□□ 0.39
CACNB1-201ENST00000344140 MARC2Q969Z3 335 aa17.48■□□□□ 0.39
CACNB1-201ENST00000344140 RBM14Q96PK6 669 aaKnown RBP17.48■□□□□ 0.39
CACNB1-201ENST00000344140 KCNIP2Q9NS61 270 aa17.48■□□□□ 0.39
CACNB1-201ENST00000344140 NOTCH2Q04721 2471 aa17.47■□□□□ 0.39
CACNB1-201ENST00000344140 TSPAN9O75954 239 aa17.47■□□□□ 0.39
CACNB1-201ENST00000344140 APELAP0DMC3 54 aa17.47■□□□□ 0.39
CACNB1-201ENST00000344140 ETFRF1Q6IPR1 90 aa17.47■□□□□ 0.39
CACNB1-201ENST00000344140 SLC16A13Q7RTY0 426 aa17.47■□□□□ 0.39
CACNB1-201ENST00000344140 NANPQ8TBE9 248 aa17.47■□□□□ 0.39
CACNB1-201ENST00000344140 SLC35E1Q96K37 410 aa17.47■□□□□ 0.39
CACNB1-201ENST00000344140 FAM210AQ96ND0 272 aa17.47■□□□□ 0.39
CACNB1-201ENST00000344140 OPRK1P41145 380 aa17.46■□□□□ 0.39
CACNB1-201ENST00000344140 GAMTQ14353 236 aa17.46■□□□□ 0.39
CACNB1-201ENST00000344140 TMEM41BQ5BJD5 291 aa17.46■□□□□ 0.39
CACNB1-201ENST00000344140 IL34Q6ZMJ4 242 aa17.46■□□□□ 0.39
CACNB1-201ENST00000344140 EIF4E3Q8N5X7 224 aaKnown RBP17.46■□□□□ 0.39
CACNB1-201ENST00000344140 OR1L6Q8NGR2 347 aa17.46■□□□□ 0.39
CACNB1-201ENST00000344140 SLC25A33Q9BSK2 321 aa17.46■□□□□ 0.39
CACNB1-201ENST00000344140 MOB4Q9Y3A3 225 aa17.46■□□□□ 0.39
CACNB1-201ENST00000344140 TEX46H3BTG2 121 aa17.46■□□□□ 0.38
CACNB1-201ENST00000344140 MGST2Q99735 147 aa17.46■□□□□ 0.38
CACNB1-201ENST00000344140 RPRMQ9NS64 109 aa17.46■□□□□ 0.38
CACNB1-201ENST00000344140 IGHV7-81A0A0B4J1V7 117 aa17.45■□□□□ 0.38
CACNB1-201ENST00000344140 RAB19A4D1S5 217 aa17.45■□□□□ 0.38
CACNB1-201ENST00000344140 FSHBP01225 129 aa17.45■□□□□ 0.38
CACNB1-201ENST00000344140 CTRB1P17538 263 aa17.45■□□□□ 0.38
CACNB1-201ENST00000344140 ELLP55199 621 aaPredicted RBP17.45■□□□□ 0.38
CACNB1-201ENST00000344140 CTRB2Q6GPI1 263 aa17.45■□□□□ 0.38
CACNB1-201ENST00000344140 TSPAN15O95858 294 aa17.44■□□□□ 0.38
CACNB1-201ENST00000344140 FFAR4Q5NUL3 377 aa17.44■□□□□ 0.38
CACNB1-201ENST00000344140 C5orf56Q8N8D9 126 aa17.44■□□□□ 0.38
CACNB1-201ENST00000344140 FAM103A1Q9BTL3 118 aaKnown RBP17.44■□□□□ 0.38
CACNB1-201ENST00000344140 GGTLC1Q9BX51 225 aa17.44■□□□□ 0.38
CACNB1-201ENST00000344140 PITPNC1Q9UKF7 332 aa17.44■□□□□ 0.38
CACNB1-201ENST00000344140 SOX21Q9Y651 276 aaPredicted RBP17.44■□□□□ 0.38
CACNB1-201ENST00000344140 CRYGCP07315 174 aa17.44■□□□□ 0.38
CACNB1-201ENST00000344140 H2AFB1P0C5Y9 115 aa17.44■□□□□ 0.38
CACNB1-201ENST00000344140 MFAP2P55001 183 aa17.44■□□□□ 0.38
CACNB1-201ENST00000344140 NDPQ00604 133 aa17.44■□□□□ 0.38
CACNB1-201ENST00000344140 MLANAQ16655 118 aa17.44■□□□□ 0.38
CACNB1-201ENST00000344140 COMMD1Q8N668 190 aa17.44■□□□□ 0.38
CACNB1-201ENST00000344140 MISP3Q96FF7 219 aa17.44■□□□□ 0.38
CACNB1-201ENST00000344140 WNT10AQ9GZT5 417 aa17.44■□□□□ 0.38
CACNB1-201ENST00000344140 FNDC4Q9H6D8 234 aaPredicted RBP17.44■□□□□ 0.38
CACNB1-201ENST00000344140 CSPG4Q6UVK1 2322 aa17.43■□□□□ 0.38
CACNB1-201ENST00000344140 NPIPB5A8MRT5 1133 aa17.43■□□□□ 0.38
CACNB1-201ENST00000344140 H3BUX3 64 aa17.43■□□□□ 0.38
CACNB1-201ENST00000344140 AGPAT2O15120 278 aa17.43■□□□□ 0.38
CACNB1-201ENST00000344140 DEFA4P12838 97 aa17.43■□□□□ 0.38
CACNB1-201ENST00000344140 ACSM6Q6P461 480 aa17.43■□□□□ 0.38
CACNB1-201ENST00000344140 TMEM219Q86XT9 240 aa17.43■□□□□ 0.38
CACNB1-201ENST00000344140 ABCA1O95477 2261 aa17.43■□□□□ 0.38
CACNB1-201ENST00000344140 C9orf139Q6ZV77 190 aa17.42■□□□□ 0.38
CACNB1-201ENST00000344140 VSIRQ9H7M9 311 aa17.42■□□□□ 0.38
CACNB1-201ENST00000344140 A6NDX4 124 aa17.41■□□□□ 0.38
CACNB1-201ENST00000344140 BTBD17A6NE02 478 aa17.41■□□□□ 0.38
CACNB1-201ENST00000344140 ACOT6Q3I5F7 207 aaPredicted RBP17.41■□□□□ 0.38
CACNB1-201ENST00000344140 TTC9CQ8N5M4 171 aa17.41■□□□□ 0.38
CACNB1-201ENST00000344140 LFNGQ8NES3 379 aa17.41■□□□□ 0.38
CACNB1-201ENST00000344140 OR2T6Q8NHC8 308 aa17.41■□□□□ 0.38
CACNB1-201ENST00000344140 C22orf15Q8WYQ4 148 aa17.41■□□□□ 0.38
CACNB1-201ENST00000344140 M0QZK8 103 aa17.41■□□□□ 0.38
CACNB1-201ENST00000344140 CYB5BO43169 146 aa17.41■□□□□ 0.38
CACNB1-201ENST00000344140 HBE1P02100 147 aa17.41■□□□□ 0.38
CACNB1-201ENST00000344140 M6PRP20645 277 aa17.41■□□□□ 0.38
CACNB1-201ENST00000344140 RPL29P47914 159 aaKnown RBP17.41■□□□□ 0.38
CACNB1-201ENST00000344140 RAB2AP61019 212 aa17.41■□□□□ 0.38
CACNB1-201ENST00000344140 UQCC3Q6UW78 93 aa17.41■□□□□ 0.38
CACNB1-201ENST00000344140 C19orf35Q6ZS72 473 aa17.41■□□□□ 0.38
CACNB1-201ENST00000344140 CIARTQ8N365 385 aaPredicted RBP17.41■□□□□ 0.38
CACNB1-201ENST00000344140 TEX29Q8N6K0 151 aa17.41■□□□□ 0.38
CACNB1-201ENST00000344140 ACY3Q96HD9 319 aa17.41■□□□□ 0.38
CACNB1-201ENST00000344140 HSPB9Q9BQS6 159 aa17.41■□□□□ 0.38
CACNB1-201ENST00000344140 PXMP4Q9Y6I8 212 aa17.41■□□□□ 0.38
CACNB1-201ENST00000344140 TRAV1-1A0A0B4J248 108 aa17.4■□□□□ 0.38
CACNB1-201ENST00000344140 EGR2P11161 476 aaPredicted RBP17.4■□□□□ 0.38
CACNB1-201ENST00000344140 ASPHD1Q5U4P2 390 aa17.4■□□□□ 0.38
CACNB1-201ENST00000344140 C16orf82Q7Z2V1 217 aa17.4■□□□□ 0.38
CACNB1-201ENST00000344140 OR10G4Q8NGN3 311 aa17.4■□□□□ 0.38
CACNB1-201ENST00000344140 OR10G9Q8NGN4 311 aa17.4■□□□□ 0.38
CACNB1-201ENST00000344140 OR10G7Q8NGN6 311 aa17.4■□□□□ 0.38
CACNB1-201ENST00000344140 SGMS2Q8NHU3 365 aa17.4■□□□□ 0.38
CACNB1-201ENST00000344140 SFT2D1Q8WV19 159 aa17.4■□□□□ 0.38
CACNB1-201ENST00000344140 RCC1LQ96I51 464 aaKnown RBP17.4■□□□□ 0.38
CACNB1-201ENST00000344140 DMRT1Q9Y5R6 373 aa17.4■□□□□ 0.38
CACNB1-201ENST00000344140 SVEP1Q4LDE5 3571 aa17.4■□□□□ 0.38
CACNB1-201ENST00000344140 ITPR3Q14573 2671 aa17.4■□□□□ 0.38
CACNB1-201ENST00000344140 ZANQ9Y493 2812 aa17.4■□□□□ 0.38
CACNB1-201ENST00000344140 SMAD7O15105 426 aaKnown RBP17.39■□□□□ 0.38
CACNB1-201ENST00000344140 DEFB112Q30KQ8 113 aa17.39■□□□□ 0.38
CACNB1-201ENST00000344140 MBD3L1Q8WWY6 194 aa17.39■□□□□ 0.38
CACNB1-201ENST00000344140 TMEM68Q96MH6 324 aa17.39■□□□□ 0.38
CACNB1-201ENST00000344140 IGKV1OR2-108A0A075B7D4 117 aa17.39■□□□□ 0.37
CACNB1-201ENST00000344140 MT-CO2P00403 227 aa17.39■□□□□ 0.37
CACNB1-201ENST00000344140 B2MP61769 119 aa17.39■□□□□ 0.37
CACNB1-201ENST00000344140 MIC13Q5XKP0 118 aa17.39■□□□□ 0.37
CACNB1-201ENST00000344140 BCL6BQ8N143 479 aaPredicted RBP17.39■□□□□ 0.37
CACNB1-201ENST00000344140 RPP25LQ8N5L8 163 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms