RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 PGLYRP1O75594 196 aaPredicted RBP15.03■□□□□ -0
SMAD4-201ENST00000342988 VSIG8P0DPA2 414 aa15.03■□□□□ -0
SMAD4-201ENST00000342988 FSTP19883 344 aa15.03■□□□□ -0
SMAD4-201ENST00000342988 ZNF79Q15937 498 aa15.03■□□□□ -0
SMAD4-201ENST00000342988 IGHV1OR21-1A0A087WYE8 117 aa15.03■□□□□ -0
SMAD4-201ENST00000342988 SPINK8P0C7L1 97 aa15.03■□□□□ -0
SMAD4-201ENST00000342988 VDAC2P45880 294 aaPredicted RBP15.03■□□□□ -0
SMAD4-201ENST00000342988 LDLRAD1Q5T700 205 aa15.03■□□□□ -0
SMAD4-201ENST00000342988 ANAPC1Q9H1A4 1944 aa15.03■□□□□ -0
SMAD4-201ENST00000342988 PAPPA2Q9BXP8 1791 aa15.02■□□□□ -0
SMAD4-201ENST00000342988 A0A1W2PRS3 328 aa15.02■□□□□ -0
SMAD4-201ENST00000342988 SOCS3O14543 225 aa15.02■□□□□ -0
SMAD4-201ENST00000342988 SCTP09683 121 aa15.02■□□□□ -0
SMAD4-201ENST00000342988 GSN-AS1Q9NRJ2 163 aa15.02■□□□□ -0
SMAD4-201ENST00000342988 SIPA1L3O60292 1781 aaPredicted RBP15.02■□□□□ -0
SMAD4-201ENST00000342988 CD5P06127 495 aa15.02□□□□□ -0.01
SMAD4-201ENST00000342988 MPTX1A8MV57 137 aa15.02□□□□□ -0.01
SMAD4-201ENST00000342988 FHL5Q5TD97 284 aa15.02□□□□□ -0.01
SMAD4-201ENST00000342988 KLHDC9Q8NEP7 349 aa15.02□□□□□ -0.01
SMAD4-201ENST00000342988 GNB1LQ9BYB4 327 aa15.02□□□□□ -0.01
SMAD4-201ENST00000342988 Q9H3A6 140 aa15.02□□□□□ -0.01
SMAD4-201ENST00000342988 HMGA1P17096 107 aaKnown RBP15.01□□□□□ -0.01
SMAD4-201ENST00000342988 ERCC8Q13216 396 aa15.01□□□□□ -0.01
SMAD4-201ENST00000342988 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.01□□□□□ -0.01
SMAD4-201ENST00000342988 TICRRQ7Z2Z1 1910 aa15.01□□□□□ -0.01
SMAD4-201ENST00000342988 TMEM8BA6NDV4 472 aa15.01□□□□□ -0.01
SMAD4-201ENST00000342988 TCF19Q9Y242 345 aa15.01□□□□□ -0.01
SMAD4-201ENST00000342988 B9A039 149 aa15.01□□□□□ -0.01
SMAD4-201ENST00000342988 CHKB-CPT1BH3BT56 60 aa15.01□□□□□ -0.01
SMAD4-201ENST00000342988 ZP1P60852 638 aa15.01□□□□□ -0.01
SMAD4-201ENST00000342988 COL9A3Q14050 684 aaPredicted RBP15.01□□□□□ -0.01
SMAD4-201ENST00000342988 OR5P3Q8WZ94 311 aa15.01□□□□□ -0.01
SMAD4-201ENST00000342988 FUT5Q11128 374 aa15.01□□□□□ -0.01
SMAD4-201ENST00000342988 FOXD3Q9UJU5 478 aaPredicted RBP15.01□□□□□ -0.01
SMAD4-201ENST00000342988 PROB1E7EW31 1015 aa15.01□□□□□ -0.01
SMAD4-201ENST00000342988 CDC42EP2O14613 210 aa15.01□□□□□ -0.01
SMAD4-201ENST00000342988 NCR2O95944 276 aa15.01□□□□□ -0.01
SMAD4-201ENST00000342988 CACNA1HO95180 2353 aa15□□□□□ -0.01
SMAD4-201ENST00000342988 RASL10AQ92737 203 aa15□□□□□ -0.01
SMAD4-201ENST00000342988 PRTN3P24158 256 aa15□□□□□ -0.01
SMAD4-201ENST00000342988 OTORQ9NRC9 128 aa15□□□□□ -0.01
SMAD4-201ENST00000342988 PPP1R27Q86WC6 154 aa15□□□□□ -0.01
SMAD4-201ENST00000342988 C2CD4DB7Z1M9 353 aa15□□□□□ -0.01
SMAD4-201ENST00000342988 FAM19A2Q8N3H0 131 aa15□□□□□ -0.01
SMAD4-201ENST00000342988 CXCL2P19875 107 aa15□□□□□ -0.01
SMAD4-201ENST00000342988 COL9A1P20849 921 aa15□□□□□ -0.01
SMAD4-201ENST00000342988 FOXA2Q9Y261 457 aaPredicted RBP15□□□□□ -0.01
SMAD4-201ENST00000342988 TEX43Q6ZNM6 134 aa14.99□□□□□ -0.01
SMAD4-201ENST00000342988 NPIPB3Q92617 1050 aa14.99□□□□□ -0.01
SMAD4-201ENST00000342988 MLNRO43193 412 aa14.99□□□□□ -0.01
SMAD4-201ENST00000342988 KCNK17Q96T54 332 aa14.99□□□□□ -0.01
SMAD4-201ENST00000342988 TLNRD1Q9H1K6 362 aa14.99□□□□□ -0.01
SMAD4-201ENST00000342988 CXCL16Q9H2A7 254 aa14.99□□□□□ -0.01
SMAD4-201ENST00000342988 SELLP14151 372 aa14.99□□□□□ -0.01
SMAD4-201ENST00000342988 ATP5L2Q7Z4Y8 100 aa14.99□□□□□ -0.01
SMAD4-201ENST00000342988 APCDD1LQ8NCL9 501 aa14.99□□□□□ -0.01
SMAD4-201ENST00000342988 C21orf62Q9NYP8 219 aa14.99□□□□□ -0.01
SMAD4-201ENST00000342988 SS18Q15532 418 aa14.99□□□□□ -0.01
SMAD4-201ENST00000342988 DRD3P35462 400 aa14.99□□□□□ -0.01
SMAD4-201ENST00000342988 NRN1LQ496H8 165 aa14.98□□□□□ -0.01
SMAD4-201ENST00000342988 Q6ZNB5 142 aa14.98□□□□□ -0.01
SMAD4-201ENST00000342988 FAM214BQ7L5A3 538 aa14.98□□□□□ -0.01
SMAD4-201ENST00000342988 LRP10Q7Z4F1 713 aa14.98□□□□□ -0.01
SMAD4-201ENST00000342988 NMBP08949 121 aa14.98□□□□□ -0.01
SMAD4-201ENST00000342988 SRD5A1P18405 259 aa14.98□□□□□ -0.01
SMAD4-201ENST00000342988 OR13A1Q8NGR1 328 aa14.98□□□□□ -0.01
SMAD4-201ENST00000342988 C1QL1O75973 258 aa14.98□□□□□ -0.01
SMAD4-201ENST00000342988 ASPHD2Q6ICH7 369 aa14.98□□□□□ -0.01
SMAD4-201ENST00000342988 NRN1Q9NPD7 142 aa14.98□□□□□ -0.01
SMAD4-201ENST00000342988 PKIGQ9Y2B9 76 aa14.98□□□□□ -0.01
SMAD4-201ENST00000342988 IGHG3P01860 377 aa14.98□□□□□ -0.01
SMAD4-201ENST00000342988 OSR1Q8TAX0 266 aaPredicted RBP14.98□□□□□ -0.01
SMAD4-201ENST00000342988 IGHV1-69-2A0A0G2JMI3 117 aa14.98□□□□□ -0.01
SMAD4-201ENST00000342988 ZG16O60844 167 aa14.98□□□□□ -0.01
SMAD4-201ENST00000342988 EGR4Q05215 589 aa14.98□□□□□ -0.01
SMAD4-201ENST00000342988 BHLHA9Q7RTU4 235 aa14.98□□□□□ -0.01
SMAD4-201ENST00000342988 ZNF660Q6AZW8 331 aaPredicted RBP14.98□□□□□ -0.01
SMAD4-201ENST00000342988 ASB1Q9Y576 335 aa14.98□□□□□ -0.01
SMAD4-201ENST00000342988 PEAR1Q5VY43 1037 aaPredicted RBP14.97□□□□□ -0.01
SMAD4-201ENST00000342988 AQP3Q92482 292 aa14.97□□□□□ -0.01
SMAD4-201ENST00000342988 C6orf226Q5I0X4 101 aa14.97□□□□□ -0.01
SMAD4-201ENST00000342988 hADV29S1A0JD25 119 aa14.97□□□□□ -0.01
SMAD4-201ENST00000342988 TCRAP04437 139 aa14.97□□□□□ -0.01
SMAD4-201ENST00000342988 IFITM1P13164 125 aa14.97□□□□□ -0.01
SMAD4-201ENST00000342988 FBXL7Q9UJT9 491 aa14.97□□□□□ -0.01
SMAD4-201ENST00000342988 TNRC6CQ9HCJ0 1690 aaKnown RBP14.97□□□□□ -0.01
SMAD4-201ENST00000342988 VSIG10L2P0DP72 767 aa14.97□□□□□ -0.01
SMAD4-201ENST00000342988 ITLN1Q8WWA0 313 aa14.97□□□□□ -0.01
SMAD4-201ENST00000342988 MRPS18BQ9Y676 258 aaKnown RBP14.97□□□□□ -0.01
SMAD4-201ENST00000342988 NDUFS5O43920 106 aa14.97□□□□□ -0.01
SMAD4-201ENST00000342988 FAM90A2PQ658T7 463 aa14.97□□□□□ -0.01
SMAD4-201ENST00000342988 HCSTQ9UBK5 93 aa14.97□□□□□ -0.01
SMAD4-201ENST00000342988 IQCF6A8MYZ5 107 aa14.97□□□□□ -0.01
SMAD4-201ENST00000342988 ZIC4Q8N9L1 334 aa14.97□□□□□ -0.01
SMAD4-201ENST00000342988 CLPSL1A2RUU4 121 aa14.96□□□□□ -0.01
SMAD4-201ENST00000342988 C3AR1Q16581 482 aa14.96□□□□□ -0.01
SMAD4-201ENST00000342988 ATXN7O15265 892 aaPredicted RBP14.96□□□□□ -0.01
SMAD4-201ENST00000342988 EFNB1P98172 346 aa14.96□□□□□ -0.01
SMAD4-201ENST00000342988 TMEM196Q5HYL7 178 aa14.96□□□□□ -0.01
SMAD4-201ENST00000342988 TTTY12Q9BZ98 90 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms