RNA–Protein interactions for RNA: ENST00000341948.6

PCDHB13-201, Transcript of protocadherin beta 13, humanhuman

APPRIS P1 BASIC

Gene PCDHB13, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13-201ENST00000341948 GTF3C1Q12789 2109 aa12.51□□□□□ -0.41
PCDHB13-201ENST00000341948 IGKV1-27A0A075B6S5 117 aa12.5□□□□□ -0.41
PCDHB13-201ENST00000341948 TDGF1P13385 188 aa12.5□□□□□ -0.41
PCDHB13-201ENST00000341948 GTF2H5Q6ZYL4 71 aa12.5□□□□□ -0.41
PCDHB13-201ENST00000341948 RPUSD1Q9UJJ7 312 aaKnown RBP12.5□□□□□ -0.41
PCDHB13-201ENST00000341948 PSPNO60542 156 aa12.5□□□□□ -0.41
PCDHB13-201ENST00000341948 NBEAP1P0C6P0 100 aa12.5□□□□□ -0.41
PCDHB13-201ENST00000341948 CD99P14209 185 aa12.5□□□□□ -0.41
PCDHB13-201ENST00000341948 CX3CL1P78423 397 aa12.5□□□□□ -0.41
PCDHB13-201ENST00000341948 RNASEH2CQ8TDP1 164 aaKnown RBP12.5□□□□□ -0.41
PCDHB13-201ENST00000341948 SFRP2Q96HF1 295 aa12.5□□□□□ -0.41
PCDHB13-201ENST00000341948 TBX15Q96SF7 602 aa12.5□□□□□ -0.41
PCDHB13-201ENST00000341948 HSPB9Q9BQS6 159 aa12.5□□□□□ -0.41
PCDHB13-201ENST00000341948 IGHV3-66A0A0C4DH42 116 aa12.5□□□□□ -0.41
PCDHB13-201ENST00000341948 LDLRAD4O15165 306 aa12.5□□□□□ -0.41
PCDHB13-201ENST00000341948 RBFOX2O43251 390 aaKnown RBP eCLIP12.5□□□□□ -0.41
PCDHB13-201ENST00000341948 VDAC2P45880 294 aaPredicted RBP12.5□□□□□ -0.41
PCDHB13-201ENST00000341948 HIST1H2BAQ96A08 127 aa12.5□□□□□ -0.41
PCDHB13-201ENST00000341948 ZNF98A6NK75 572 aa12.5□□□□□ -0.41
PCDHB13-201ENST00000341948 AMY1AP04745 511 aa12.5□□□□□ -0.41
PCDHB13-201ENST00000341948 WT1P19544 449 aaPredicted RBP12.5□□□□□ -0.41
PCDHB13-201ENST00000341948 ANOS1P23352 680 aa12.5□□□□□ -0.41
PCDHB13-201ENST00000341948 RELBQ01201 579 aa12.5□□□□□ -0.41
PCDHB13-201ENST00000341948 ZNF324BQ6AW86 544 aaPredicted RBP12.5□□□□□ -0.41
PCDHB13-201ENST00000341948 UPK2O00526 184 aa12.49□□□□□ -0.41
PCDHB13-201ENST00000341948 SIAH2O43255 324 aa12.49□□□□□ -0.41
PCDHB13-201ENST00000341948 FAM169BQ8N8A8 192 aa12.49□□□□□ -0.41
PCDHB13-201ENST00000341948 COL8A2P25067 703 aa12.49□□□□□ -0.41
PCDHB13-201ENST00000341948 FAM166AQ6J272 317 aa12.49□□□□□ -0.41
PCDHB13-201ENST00000341948 C11orf44Q8N8P7 122 aa12.49□□□□□ -0.41
PCDHB13-201ENST00000341948 SYT8Q8NBV8 401 aa12.49□□□□□ -0.41
PCDHB13-201ENST00000341948 OR1P1Q8NH06 330 aa12.49□□□□□ -0.41
PCDHB13-201ENST00000341948 F8VVB4 439 aa12.49□□□□□ -0.41
PCDHB13-201ENST00000341948 F8VWA3 439 aa12.49□□□□□ -0.41
PCDHB13-201ENST00000341948 GPX4P36969 197 aaPredicted RBP12.49□□□□□ -0.41
PCDHB13-201ENST00000341948 HGFACQ04756 655 aa12.49□□□□□ -0.41
PCDHB13-201ENST00000341948 TMEM200BQ69YZ2 307 aa12.49□□□□□ -0.41
PCDHB13-201ENST00000341948 ZNF841Q6ZN19 808 aa12.49□□□□□ -0.41
PCDHB13-201ENST00000341948 PRO3102Q9H379 93 aa12.49□□□□□ -0.41
PCDHB13-201ENST00000341948 CGAP01215 116 aa12.49□□□□□ -0.41
PCDHB13-201ENST00000341948 HEPN1Q6WQI6 88 aa12.49□□□□□ -0.41
PCDHB13-201ENST00000341948 CLDND2Q8NHS1 167 aa12.49□□□□□ -0.41
PCDHB13-201ENST00000341948 TNFRSF14Q92956 283 aa12.49□□□□□ -0.41
PCDHB13-201ENST00000341948 BPESC1Q9GZL8 116 aa12.49□□□□□ -0.41
PCDHB13-201ENST00000341948 H0YIZ8 118 aa12.48□□□□□ -0.41
PCDHB13-201ENST00000341948 ICAM4Q14773 271 aa12.48□□□□□ -0.41
PCDHB13-201ENST00000341948 TUBA4BQ9H853 241 aa12.48□□□□□ -0.41
PCDHB13-201ENST00000341948 PHLDA3Q9Y5J5 127 aa12.48□□□□□ -0.41
PCDHB13-201ENST00000341948 GPX1P07203 203 aa12.48□□□□□ -0.41
PCDHB13-201ENST00000341948 RNF224P0DH78 156 aa12.48□□□□□ -0.41
PCDHB13-201ENST00000341948 ID3Q02535 119 aa12.48□□□□□ -0.41
PCDHB13-201ENST00000341948 BIVMQ86UB2 503 aa12.48□□□□□ -0.41
PCDHB13-201ENST00000341948 CD177Q8N6Q3 437 aa12.48□□□□□ -0.41
PCDHB13-201ENST00000341948 CARHSP1Q9Y2V2 147 aaKnown RBP12.48□□□□□ -0.41
PCDHB13-201ENST00000341948 C15orf61A6NNL5 157 aa12.48□□□□□ -0.41
PCDHB13-201ENST00000341948 TSPOP30536 169 aa12.48□□□□□ -0.41
PCDHB13-201ENST00000341948 CEACAM8P31997 349 aaPredicted RBP12.48□□□□□ -0.41
PCDHB13-201ENST00000341948 PKIAP61925 76 aa12.48□□□□□ -0.41
PCDHB13-201ENST00000341948 SAPCD1Q5SSQ6 148 aa12.48□□□□□ -0.41
PCDHB13-201ENST00000341948 LHFPL1Q86WI0 220 aa12.48□□□□□ -0.41
PCDHB13-201ENST00000341948 DMRTA2Q96SC8 542 aa12.48□□□□□ -0.41
PCDHB13-201ENST00000341948 ETV2O00321 342 aaPredicted RBP12.48□□□□□ -0.41
PCDHB13-201ENST00000341948 RAMP3O60896 148 aa12.48□□□□□ -0.41
PCDHB13-201ENST00000341948 WNT2P09544 360 aa12.48□□□□□ -0.41
PCDHB13-201ENST00000341948 HIST1H1AQ02539 215 aaPredicted RBP12.48□□□□□ -0.41
PCDHB13-201ENST00000341948 SRSF7Q16629 238 aaKnown RBP eCLIP12.48□□□□□ -0.41
PCDHB13-201ENST00000341948 TMEM144Q7Z5S9 345 aa12.48□□□□□ -0.41
PCDHB13-201ENST00000341948 SCN8AQ9UQD0 1980 aa12.47□□□□□ -0.41
PCDHB13-201ENST00000341948 IGHV2-26A0A0B4J1V2 119 aa12.47□□□□□ -0.41
PCDHB13-201ENST00000341948 IFITM10A6NMD0 228 aa12.47□□□□□ -0.41
PCDHB13-201ENST00000341948 DUTP33316 252 aaKnown RBP12.47□□□□□ -0.41
PCDHB13-201ENST00000341948 LYRM7Q5U5X0 104 aa12.47□□□□□ -0.41
PCDHB13-201ENST00000341948 VMO1Q7Z5L0 202 aa12.47□□□□□ -0.41
PCDHB13-201ENST00000341948 SRP19P09132 144 aaKnown RBP12.47□□□□□ -0.41
PCDHB13-201ENST00000341948 IGHV1-8P0DP01 117 aa12.47□□□□□ -0.41
PCDHB13-201ENST00000341948 GBF1Q92538 1859 aa12.47□□□□□ -0.41
PCDHB13-201ENST00000341948 A8MXK9 166 aa12.47□□□□□ -0.41
PCDHB13-201ENST00000341948 MLNRO43193 412 aa12.47□□□□□ -0.41
PCDHB13-201ENST00000341948 OTX1P32242 354 aaPredicted RBP12.47□□□□□ -0.41
PCDHB13-201ENST00000341948 KLRD1Q13241 179 aa12.47□□□□□ -0.41
PCDHB13-201ENST00000341948 BRD3OSQ6XYD6 125 aa12.47□□□□□ -0.41
PCDHB13-201ENST00000341948 LRTM2Q8N967 370 aa12.47□□□□□ -0.41
PCDHB13-201ENST00000341948 ZFP30Q9Y2G7 519 aa12.47□□□□□ -0.41
PCDHB13-201ENST00000341948 FOXL2NBQ6ZUU3 175 aa12.47□□□□□ -0.41
PCDHB13-201ENST00000341948 LINC00527Q9UJ94 153 aa12.47□□□□□ -0.41
PCDHB13-201ENST00000341948 TNFSF13O75888 250 aa12.46□□□□□ -0.41
PCDHB13-201ENST00000341948 SRIP30626 198 aa12.46□□□□□ -0.41
PCDHB13-201ENST00000341948 PLAURQ03405 335 aa12.46□□□□□ -0.41
PCDHB13-201ENST00000341948 CYB5R2Q6BCY4 276 aa12.46□□□□□ -0.41
PCDHB13-201ENST00000341948 SLC25A16P16260 332 aa12.46□□□□□ -0.41
PCDHB13-201ENST00000341948 DLX1P56177 255 aa12.46□□□□□ -0.41
PCDHB13-201ENST00000341948 SMUG1Q53HV7 270 aa12.46□□□□□ -0.41
PCDHB13-201ENST00000341948 OTOGLQ3ZCN5 2332 aa12.46□□□□□ -0.41
PCDHB13-201ENST00000341948 BTF3P20290 206 aaKnown RBP12.46□□□□□ -0.42
PCDHB13-201ENST00000341948 TMEM42Q69YG0 159 aa12.46□□□□□ -0.42
PCDHB13-201ENST00000341948 OR52E5Q8NH55 327 aa12.46□□□□□ -0.42
PCDHB13-201ENST00000341948 AP5S1Q9NUS5 200 aa12.46□□□□□ -0.42
PCDHB13-201ENST00000341948 KIAA1644Q3SXP7 199 aa12.46□□□□□ -0.42
PCDHB13-201ENST00000341948 C8orf46Q8TAG6 207 aa12.46□□□□□ -0.42
PCDHB13-201ENST00000341948 TRBV9A0A0B4J1U6 114 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms