RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 TREML4Q6UXN2 200 aa9.88□□□□□ -0.83
USP1-201ENST00000339950 NABP2Q9BQ15 211 aa9.88□□□□□ -0.83
USP1-201ENST00000339950 PSMG3Q9BT73 122 aaPredicted RBP9.88□□□□□ -0.83
USP1-201ENST00000339950 HSPB7Q9UBY9 170 aa9.88□□□□□ -0.83
USP1-201ENST00000339950 USP9XQ93008 2570 aaPredicted RBP9.88□□□□□ -0.83
USP1-201ENST00000339950 CHEK1O14757 476 aa9.87□□□□□ -0.83
USP1-201ENST00000339950 ADH4P08319 380 aa9.87□□□□□ -0.83
USP1-201ENST00000339950 LINC00869P0C866 280 aa9.87□□□□□ -0.83
USP1-201ENST00000339950 LYZP61626 148 aa9.87□□□□□ -0.83
USP1-201ENST00000339950 GNG5P63218 68 aa9.87□□□□□ -0.83
USP1-201ENST00000339950 MZT1Q08AG7 82 aa9.87□□□□□ -0.83
USP1-201ENST00000339950 CENPWQ5EE01 88 aa9.87□□□□□ -0.83
USP1-201ENST00000339950 TEX38Q6PEX7 206 aa9.87□□□□□ -0.83
USP1-201ENST00000339950 LINC00596Q86U02 117 aa9.87□□□□□ -0.83
USP1-201ENST00000339950 MDS2Q8NDY4 140 aa9.87□□□□□ -0.83
USP1-201ENST00000339950 SFRP2Q96HF1 295 aa9.87□□□□□ -0.83
USP1-201ENST00000339950 SLC25A10Q9UBX3 287 aaPredicted RBP9.87□□□□□ -0.83
USP1-201ENST00000339950 NKX6-3A6NJ46 265 aa9.87□□□□□ -0.83
USP1-201ENST00000339950 IQCF6A8MYZ5 107 aa9.87□□□□□ -0.83
USP1-201ENST00000339950 ZNF146Q15072 292 aa9.87□□□□□ -0.83
USP1-201ENST00000339950 FAM90A1Q86YD7 464 aa9.87□□□□□ -0.83
USP1-201ENST00000339950 ZNF738Q8NE65 137 aa9.87□□□□□ -0.83
USP1-201ENST00000339950 P2RX4Q99571 388 aa9.87□□□□□ -0.83
USP1-201ENST00000339950 HILPDAQ9Y5L2 63 aa9.87□□□□□ -0.83
USP1-201ENST00000339950 KIAA1549Q9HCM3 1950 aa9.87□□□□□ -0.83
USP1-201ENST00000339950 VSTM5A8MXK1 200 aa9.87□□□□□ -0.83
USP1-201ENST00000339950 SERF1AO75920 110 aa9.87□□□□□ -0.83
USP1-201ENST00000339950 GCHFRP30047 84 aa9.87□□□□□ -0.83
USP1-201ENST00000339950 SRIP30626 198 aa9.87□□□□□ -0.83
USP1-201ENST00000339950 RND2P52198 227 aa9.87□□□□□ -0.83
USP1-201ENST00000339950 RPEL1Q2QD12 228 aa9.87□□□□□ -0.83
USP1-201ENST00000339950 TMEM14EPQ6UXP3 125 aa9.87□□□□□ -0.83
USP1-201ENST00000339950 MUC15Q8N387 334 aa9.87□□□□□ -0.83
USP1-201ENST00000339950 LPAR2Q9HBW0 351 aa9.87□□□□□ -0.83
USP1-201ENST00000339950 HCFC1P51610 2035 aa9.86□□□□□ -0.83
USP1-201ENST00000339950 SERTM2A0A1B0GWG4 89 aa9.86□□□□□ -0.83
USP1-201ENST00000339950 TMEM210A6NLX4 147 aa9.86□□□□□ -0.83
USP1-201ENST00000339950 A8MWP6 167 aa9.86□□□□□ -0.83
USP1-201ENST00000339950 RBFOX2O43251 390 aaKnown RBP eCLIP9.86□□□□□ -0.83
USP1-201ENST00000339950 IGLV2-14P01704 120 aa9.86□□□□□ -0.83
USP1-201ENST00000339950 SMIM15Q7Z3B0 74 aa9.86□□□□□ -0.83
USP1-201ENST00000339950 MBD3L1Q8WWY6 194 aa9.86□□□□□ -0.83
USP1-201ENST00000339950 NEUROG1Q92886 237 aa9.86□□□□□ -0.83
USP1-201ENST00000339950 ABCA2Q9BZC7 2435 aa9.86□□□□□ -0.83
USP1-201ENST00000339950 CPAMD8Q8IZJ3 1885 aa9.86□□□□□ -0.83
USP1-201ENST00000339950 IGHV3OR16-13A0A075B7E8 117 aa9.86□□□□□ -0.83
USP1-201ENST00000339950 IGHV3-74A0A0B4J1X5 117 aa9.86□□□□□ -0.83
USP1-201ENST00000339950 CYC1P08574 325 aa9.86□□□□□ -0.83
USP1-201ENST00000339950 ADMP35318 185 aa9.86□□□□□ -0.83
USP1-201ENST00000339950 SCGB2A2Q13296 93 aa9.86□□□□□ -0.83
USP1-201ENST00000339950 CT45A1Q5HYN5 189 aa9.86□□□□□ -0.83
USP1-201ENST00000339950 WDR31Q8NA23 367 aa9.86□□□□□ -0.83
USP1-201ENST00000339950 CT45A3Q8NHU0 189 aa9.86□□□□□ -0.83
USP1-201ENST00000339950 MCRIP2Q9BUT9 160 aaKnown RBP9.86□□□□□ -0.83
USP1-201ENST00000339950 PIEZO1Q92508 2521 aa9.86□□□□□ -0.83
USP1-201ENST00000339950 CXorf1O96002 111 aa9.86□□□□□ -0.83
USP1-201ENST00000339950 HSPE1P61604 102 aaKnown RBP9.86□□□□□ -0.83
USP1-201ENST00000339950 MSMPQ1L6U9 139 aa9.86□□□□□ -0.83
USP1-201ENST00000339950 MGST2Q99735 147 aa9.86□□□□□ -0.83
USP1-201ENST00000339950 MRPL20Q9BYC9 149 aaKnown RBP9.86□□□□□ -0.83
USP1-201ENST00000339950 ONECUT1Q9UBC0 465 aa9.86□□□□□ -0.83
USP1-201ENST00000339950 YTHDF2Q9Y5A9 579 aaKnown RBP9.86□□□□□ -0.83
USP1-201ENST00000339950 A0A1B0GW64 132 aa9.85□□□□□ -0.83
USP1-201ENST00000339950 DLEU1O43261 78 aa9.85□□□□□ -0.83
USP1-201ENST00000339950 NDUFB3O43676 98 aa9.85□□□□□ -0.83
USP1-201ENST00000339950 BRS3P32247 399 aa9.85□□□□□ -0.83
USP1-201ENST00000339950 DIAPH2-AS1Q14236 149 aa9.85□□□□□ -0.83
USP1-201ENST00000339950 MMD2Q8IY49 270 aa9.85□□□□□ -0.83
USP1-201ENST00000339950 RAB37Q96AX2 223 aa9.85□□□□□ -0.83
USP1-201ENST00000339950 NPPCP23582 126 aa9.85□□□□□ -0.83
USP1-201ENST00000339950 Q5PR19 223 aa9.85□□□□□ -0.83
USP1-201ENST00000339950 SSX8Q7RTT4 187 aa9.85□□□□□ -0.83
USP1-201ENST00000339950 F2Z2F3 143 aa9.85□□□□□ -0.83
USP1-201ENST00000339950 Q6ZVH6 145 aa9.85□□□□□ -0.83
USP1-201ENST00000339950 LINC01551Q86U37 167 aa9.85□□□□□ -0.83
USP1-201ENST00000339950 LINC01560Q8TB33 94 aa9.85□□□□□ -0.83
USP1-201ENST00000339950 ZCCHC14Q8WYQ9 949 aaKnown RBP9.85□□□□□ -0.83
USP1-201ENST00000339950 PMCHL2Q9BQD1 86 aa9.85□□□□□ -0.83
USP1-201ENST00000339950 GGTLC1Q9BX51 225 aa9.85□□□□□ -0.83
USP1-201ENST00000339950 ZNF891A8MT65 544 aaPredicted RBP9.84□□□□□ -0.83
USP1-201ENST00000339950 NUPR1O60356 82 aa9.84□□□□□ -0.83
USP1-201ENST00000339950 GTF2H5Q6ZYL4 71 aa9.84□□□□□ -0.83
USP1-201ENST00000339950 C22orf15Q8WYQ4 148 aa9.84□□□□□ -0.83
USP1-201ENST00000339950 RNF2Q99496 336 aa9.84□□□□□ -0.83
USP1-201ENST00000339950 hADV38S2A0JD32 116 aa9.84□□□□□ -0.83
USP1-201ENST00000339950 EFNB3Q15768 340 aa9.84□□□□□ -0.83
USP1-201ENST00000339950 UNQ5815/PRO19632Q6UWF5 114 aa9.84□□□□□ -0.83
USP1-201ENST00000339950 TBL2Q9Y4P3 447 aaKnown RBP9.84□□□□□ -0.83
USP1-201ENST00000339950 M0QZ24 198 aa9.84□□□□□ -0.83
USP1-201ENST00000339950 IGHV3-23P01764 117 aa9.84□□□□□ -0.83
USP1-201ENST00000339950 CD99P14209 185 aa9.84□□□□□ -0.83
USP1-201ENST00000339950 ZNF474Q6S9Z5 364 aaPredicted RBP9.84□□□□□ -0.83
USP1-201ENST00000339950 TMEM108Q6UXF1 575 aa9.84□□□□□ -0.83
USP1-201ENST00000339950 OR1L4Q8NGR5 311 aa9.84□□□□□ -0.83
USP1-201ENST00000339950 TRBV24-1A0A075B6N3 115 aa9.83□□□□□ -0.84
USP1-201ENST00000339950 NCBP2LA6PVI3 153 aaKnown RBP9.83□□□□□ -0.84
USP1-201ENST00000339950 J3KRW8 73 aa9.83□□□□□ -0.84
USP1-201ENST00000339950 PMCHL1Q16048 86 aa9.83□□□□□ -0.84
USP1-201ENST00000339950 ZBTB34Q8NCN2 500 aa9.83□□□□□ -0.84
USP1-201ENST00000339950 DIRC2Q96SL1 478 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms