RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 OR4B1Q8NGF8 309 aa11.67□□□□□ -0.54
PCDH8-201ENST00000338862 CORO2AQ92828 525 aa11.67□□□□□ -0.54
PCDH8-201ENST00000338862 GMPPAQ96IJ6 420 aaPredicted RBP11.67□□□□□ -0.54
PCDH8-201ENST00000338862 LAMTOR2Q9Y2Q5 125 aa11.67□□□□□ -0.54
PCDH8-201ENST00000338862 AMMECR1Q9Y4X0 333 aaPredicted RBP11.67□□□□□ -0.54
PCDH8-201ENST00000338862 CREBBPQ92793 2442 aa11.66□□□□□ -0.54
PCDH8-201ENST00000338862 TMEM210A6NLX4 147 aa11.66□□□□□ -0.54
PCDH8-201ENST00000338862 PMS2P5A8MQ11 134 aa11.66□□□□□ -0.54
PCDH8-201ENST00000338862 C10orf142B7Z368 130 aa11.66□□□□□ -0.54
PCDH8-201ENST00000338862 MGST3O14880 152 aa11.66□□□□□ -0.54
PCDH8-201ENST00000338862 IGKV1-16P04430 117 aa11.66□□□□□ -0.54
PCDH8-201ENST00000338862 ZNF138P52744 262 aa11.66□□□□□ -0.54
PCDH8-201ENST00000338862 KRTAP27-1Q3LI81 207 aa11.66□□□□□ -0.54
PCDH8-201ENST00000338862 WFDC8Q8IUA0 241 aa11.66□□□□□ -0.54
PCDH8-201ENST00000338862 FAM168AQ92567 244 aa11.66□□□□□ -0.54
PCDH8-201ENST00000338862 RNF2Q99496 336 aa11.66□□□□□ -0.54
PCDH8-201ENST00000338862 HES4Q9HCC6 221 aa11.66□□□□□ -0.54
PCDH8-201ENST00000338862 GPX1P07203 203 aa11.65□□□□□ -0.54
PCDH8-201ENST00000338862 TNFAIP6P98066 277 aaPredicted RBP11.65□□□□□ -0.54
PCDH8-201ENST00000338862 SPRNQ5BIV9 151 aa11.65□□□□□ -0.54
PCDH8-201ENST00000338862 INO80CQ6PI98 192 aaPredicted RBP11.65□□□□□ -0.54
PCDH8-201ENST00000338862 STPG4Q8N801 248 aa11.65□□□□□ -0.54
PCDH8-201ENST00000338862 AP1S3Q96PC3 154 aa11.65□□□□□ -0.54
PCDH8-201ENST00000338862 MALRD1Q5VYJ5 2156 aa11.65□□□□□ -0.54
PCDH8-201ENST00000338862 PGPA6NDG6 321 aa11.65□□□□□ -0.54
PCDH8-201ENST00000338862 WNT2P09544 360 aa11.65□□□□□ -0.54
PCDH8-201ENST00000338862 GABRA6Q16445 453 aa11.65□□□□□ -0.54
PCDH8-201ENST00000338862 RNF114Q9Y508 228 aa11.65□□□□□ -0.54
PCDH8-201ENST00000338862 MGAQ8IWI9 3026 aa11.65□□□□□ -0.54
PCDH8-201ENST00000338862 IQCF6A8MYZ5 107 aa11.65□□□□□ -0.54
PCDH8-201ENST00000338862 KLF3P57682 345 aaPredicted RBP11.65□□□□□ -0.54
PCDH8-201ENST00000338862 C9orf106Q8NAJ2 232 aa11.65□□□□□ -0.54
PCDH8-201ENST00000338862 PAXXQ9BUH6 204 aa11.65□□□□□ -0.54
PCDH8-201ENST00000338862 UQCRFS1P47985 274 aa11.64□□□□□ -0.55
PCDH8-201ENST00000338862 DLX1P56177 255 aa11.64□□□□□ -0.55
PCDH8-201ENST00000338862 ERVK11-1P61568 191 aa11.64□□□□□ -0.55
PCDH8-201ENST00000338862 COA6Q5JTJ3 125 aaKnown RBP11.64□□□□□ -0.55
PCDH8-201ENST00000338862 TPTE2P1Q5T6R2 138 aa11.64□□□□□ -0.55
PCDH8-201ENST00000338862 NOTCH3Q9UM47 2321 aa11.64□□□□□ -0.55
PCDH8-201ENST00000338862 LNP1A1A4G5 178 aa11.64□□□□□ -0.55
PCDH8-201ENST00000338862 ZNF324O75467 553 aaPredicted RBP11.64□□□□□ -0.55
PCDH8-201ENST00000338862 TYMSP04818 313 aa11.64□□□□□ -0.55
PCDH8-201ENST00000338862 TNXAQ16473 311 aa11.64□□□□□ -0.55
PCDH8-201ENST00000338862 SAP30LQ9HAJ7 183 aa11.64□□□□□ -0.55
PCDH8-201ENST00000338862 CDC42EP3Q9UKI2 254 aa11.64□□□□□ -0.55
PCDH8-201ENST00000338862 S4R3C0 116 aa11.64□□□□□ -0.55
PCDH8-201ENST00000338862 CYC1P08574 325 aa11.64□□□□□ -0.55
PCDH8-201ENST00000338862 CCL3L1P16619 93 aa11.64□□□□□ -0.55
PCDH8-201ENST00000338862 ZNF841Q6ZN19 808 aa11.64□□□□□ -0.55
PCDH8-201ENST00000338862 FDCSPQ8NFU4 85 aa11.64□□□□□ -0.55
PCDH8-201ENST00000338862 CDX2Q99626 313 aaPredicted RBP11.64□□□□□ -0.55
PCDH8-201ENST00000338862 IGKV1D-17A0A075B6S4 117 aa11.63□□□□□ -0.55
PCDH8-201ENST00000338862 A0A1W2PS18 150 aa11.63□□□□□ -0.55
PCDH8-201ENST00000338862 LGALS4P56470 323 aa11.63□□□□□ -0.55
PCDH8-201ENST00000338862 CT45A1Q5HYN5 189 aa11.63□□□□□ -0.55
PCDH8-201ENST00000338862 C10orf113Q5VZT2 155 aa11.63□□□□□ -0.55
PCDH8-201ENST00000338862 CT45A3Q8NHU0 189 aa11.63□□□□□ -0.55
PCDH8-201ENST00000338862 KIAA1549Q9HCM3 1950 aa11.63□□□□□ -0.55
PCDH8-201ENST00000338862 LOC389332A0A1B0GUA5 103 aa11.63□□□□□ -0.55
PCDH8-201ENST00000338862 HIGD1CA8MV81 97 aa11.63□□□□□ -0.55
PCDH8-201ENST00000338862 PROP1O75360 226 aa11.63□□□□□ -0.55
PCDH8-201ENST00000338862 AMY1AP04745 511 aa11.63□□□□□ -0.55
PCDH8-201ENST00000338862 C8orf88P0DMB2 117 aa11.63□□□□□ -0.55
PCDH8-201ENST00000338862 C19orf35Q6ZS72 473 aa11.63□□□□□ -0.55
PCDH8-201ENST00000338862 MUC15Q8N387 334 aa11.63□□□□□ -0.55
PCDH8-201ENST00000338862 Q8TCH9 128 aa11.63□□□□□ -0.55
PCDH8-201ENST00000338862 CORTO00230 105 aa11.63□□□□□ -0.55
PCDH8-201ENST00000338862 KCNS1Q96KK3 526 aa11.63□□□□□ -0.55
PCDH8-201ENST00000338862 GSX1Q9H4S2 264 aaPredicted RBP11.63□□□□□ -0.55
PCDH8-201ENST00000338862 EXPH5Q8NEV8 1989 aa11.63□□□□□ -0.55
PCDH8-201ENST00000338862 NPIPB11E5RHQ5 1161 aa11.62□□□□□ -0.55
PCDH8-201ENST00000338862 SLC25A17O43808 307 aa11.62□□□□□ -0.55
PCDH8-201ENST00000338862 CD99P14209 185 aa11.62□□□□□ -0.55
PCDH8-201ENST00000338862 SLAQ13239 276 aa11.62□□□□□ -0.55
PCDH8-201ENST00000338862 CLEC7AQ9BXN2 247 aa11.62□□□□□ -0.55
PCDH8-201ENST00000338862 RBP4P02753 201 aa11.62□□□□□ -0.55
PCDH8-201ENST00000338862 LYZP61626 148 aa11.62□□□□□ -0.55
PCDH8-201ENST00000338862 MZT1Q08AG7 82 aa11.62□□□□□ -0.55
PCDH8-201ENST00000338862 Q6ZT83 130 aa11.62□□□□□ -0.55
PCDH8-201ENST00000338862 NAA38Q9BRA0 125 aaKnown RBP11.62□□□□□ -0.55
PCDH8-201ENST00000338862 MMP23AO75900 390 aa11.62□□□□□ -0.55
PCDH8-201ENST00000338862 HLA-DQA1P01909 254 aa11.62□□□□□ -0.55
PCDH8-201ENST00000338862 TNFSF4P23510 183 aa11.62□□□□□ -0.55
PCDH8-201ENST00000338862 BHLHA15Q7RTS1 189 aaPredicted RBP11.62□□□□□ -0.55
PCDH8-201ENST00000338862 PDPNQ86YL7 162 aa11.62□□□□□ -0.55
PCDH8-201ENST00000338862 SARAFQ96BY9 339 aa11.62□□□□□ -0.55
PCDH8-201ENST00000338862 TP53TG3Q9ULZ0 132 aa11.62□□□□□ -0.55
PCDH8-201ENST00000338862 IGHV2OR16-5A0A0B4J2B6 119 aa11.61□□□□□ -0.55
PCDH8-201ENST00000338862 C22orf15Q8WYQ4 148 aa11.61□□□□□ -0.55
PCDH8-201ENST00000338862 hADV38S2A0JD32 116 aa11.61□□□□□ -0.55
PCDH8-201ENST00000338862 hDV102S1A0JD36 115 aa11.61□□□□□ -0.55
PCDH8-201ENST00000338862 C15orf61A6NNL5 157 aa11.61□□□□□ -0.55
PCDH8-201ENST00000338862 GGTLC3B5MD39 225 aa11.61□□□□□ -0.55
PCDH8-201ENST00000338862 NUDT3O95989 172 aa11.61□□□□□ -0.55
PCDH8-201ENST00000338862 PDLIM4P50479 330 aa11.61□□□□□ -0.55
PCDH8-201ENST00000338862 MORN5Q5VZ52 161 aa11.61□□□□□ -0.55
PCDH8-201ENST00000338862 TMEM144Q7Z5S9 345 aa11.61□□□□□ -0.55
PCDH8-201ENST00000338862 C1orf174Q8IYL3 243 aa11.61□□□□□ -0.55
PCDH8-201ENST00000338862 GCSAMQ8N6F7 178 aa11.61□□□□□ -0.55
PCDH8-201ENST00000338862 ZC2HC1AQ96GY0 325 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms