RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 BSCL2Q96G97 398 aaPredicted RBP11.52□□□□□ -0.57
PRKN-201ENST00000338468 SCGB3A2Q96PL1 93 aa11.52□□□□□ -0.57
PRKN-201ENST00000338468 SDHCQ99643 169 aaPredicted RBP11.52□□□□□ -0.57
PRKN-201ENST00000338468 SELENOKQ9Y6D0 94 aa11.52□□□□□ -0.57
PRKN-201ENST00000338468 MT-CO2P00403 227 aa11.51□□□□□ -0.57
PRKN-201ENST00000338468 IFNA17P01571 189 aa11.51□□□□□ -0.57
PRKN-201ENST00000338468 IGHV3-48P01763 117 aa11.51□□□□□ -0.57
PRKN-201ENST00000338468 CTSGP08311 255 aa11.51□□□□□ -0.57
PRKN-201ENST00000338468 FRMD6-AS1P0C7T7 363 aa11.51□□□□□ -0.57
PRKN-201ENST00000338468 RNASE2P10153 161 aaKnown RBP11.51□□□□□ -0.57
PRKN-201ENST00000338468 FAUP35544 74 aaKnown RBP11.51□□□□□ -0.57
PRKN-201ENST00000338468 AP3S2P59780 193 aa11.51□□□□□ -0.57
PRKN-201ENST00000338468 ERHP84090 104 aaKnown RBP11.51□□□□□ -0.57
PRKN-201ENST00000338468 BAK1Q16611 211 aa11.51□□□□□ -0.57
PRKN-201ENST00000338468 SPANXN2Q5MJ10 180 aa11.51□□□□□ -0.57
PRKN-201ENST00000338468 LCN12Q6JVE5 192 aa11.51□□□□□ -0.57
PRKN-201ENST00000338468 SLC35G3Q8N808 338 aa11.51□□□□□ -0.57
PRKN-201ENST00000338468 MISP3Q96FF7 219 aa11.51□□□□□ -0.57
PRKN-201ENST00000338468 MLXQ9UH92 298 aa11.51□□□□□ -0.57
PRKN-201ENST00000338468 C8orf88P0DMB2 117 aa11.5□□□□□ -0.57
PRKN-201ENST00000338468 IGHV4-30-4P0DP06 118 aa11.5□□□□□ -0.57
PRKN-201ENST00000338468 AKR1C4P17516 323 aa11.5□□□□□ -0.57
PRKN-201ENST00000338468 FCGR2BP31994 310 aaPredicted RBP11.5□□□□□ -0.57
PRKN-201ENST00000338468 BSXQ3C1V8 233 aa11.5□□□□□ -0.57
PRKN-201ENST00000338468 SPSB3Q6PJ21 355 aa11.5□□□□□ -0.57
PRKN-201ENST00000338468 SBSPONQ8IVN8 264 aa11.5□□□□□ -0.57
PRKN-201ENST00000338468 UBAC2Q8NBM4 344 aa11.5□□□□□ -0.57
PRKN-201ENST00000338468 UXS1Q8NBZ7 420 aa11.5□□□□□ -0.57
PRKN-201ENST00000338468 RNASE11Q8TAA1 199 aaKnown RBP11.5□□□□□ -0.57
PRKN-201ENST00000338468 DYNLRB2Q8TF09 96 aa11.5□□□□□ -0.57
PRKN-201ENST00000338468 DEDD2Q8WXF8 326 aa11.5□□□□□ -0.57
PRKN-201ENST00000338468 TMEM190Q8WZ59 177 aa11.5□□□□□ -0.57
PRKN-201ENST00000338468 IL22RA2Q969J5 263 aa11.5□□□□□ -0.57
PRKN-201ENST00000338468 C19orf73Q9NVV2 129 aa11.5□□□□□ -0.57
PRKN-201ENST00000338468 TECRQ9NZ01 308 aaKnown RBP11.5□□□□□ -0.57
PRKN-201ENST00000338468 NDUFA13Q9P0J0 144 aa11.5□□□□□ -0.57
PRKN-201ENST00000338468 CACNG5Q9UF02 275 aa11.5□□□□□ -0.57
PRKN-201ENST00000338468 KCNIP3Q9Y2W7 256 aa11.5□□□□□ -0.57
PRKN-201ENST00000338468 SPCS3P61009 180 aa11.49□□□□□ -0.57
PRKN-201ENST00000338468 Q56UQ5 140 aa11.49□□□□□ -0.57
PRKN-201ENST00000338468 OR52E5Q8NH55 327 aa11.49□□□□□ -0.57
PRKN-201ENST00000338468 WDR89Q96FK6 387 aaPredicted RBP11.49□□□□□ -0.57
PRKN-201ENST00000338468 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.49□□□□□ -0.57
PRKN-201ENST00000338468 A8MZ25 164 aa11.48□□□□□ -0.57
PRKN-201ENST00000338468 HOXA1P49639 335 aaPredicted RBP11.48□□□□□ -0.57
PRKN-201ENST00000338468 MFAP4P55083 255 aa11.48□□□□□ -0.57
PRKN-201ENST00000338468 ELLP55199 621 aaPredicted RBP11.48□□□□□ -0.57
PRKN-201ENST00000338468 NMSQ5H8A3 153 aa11.48□□□□□ -0.57
PRKN-201ENST00000338468 LYZL2Q7Z4W2 148 aa11.48□□□□□ -0.57
PRKN-201ENST00000338468 TMED4Q7Z7H5 227 aa11.48□□□□□ -0.57
PRKN-201ENST00000338468 TMEM61Q8N0U2 210 aa11.48□□□□□ -0.57
PRKN-201ENST00000338468 PINX1Q96BK5 328 aaKnown RBP11.48□□□□□ -0.57
PRKN-201ENST00000338468 TXN2Q99757 166 aa11.48□□□□□ -0.57
PRKN-201ENST00000338468 PDCD10Q9BUL8 212 aa11.48□□□□□ -0.57
PRKN-201ENST00000338468 PALMDQ9NP74 551 aa11.48□□□□□ -0.57
PRKN-201ENST00000338468 UFC1Q9Y3C8 167 aa11.48□□□□□ -0.57
PRKN-201ENST00000338468 IGHV3OR16-8A0A075B7F1 116 aa11.47□□□□□ -0.57
PRKN-201ENST00000338468 A0A0B4J2A0 478 aa11.47□□□□□ -0.57
PRKN-201ENST00000338468 NDUFA4O00483 81 aa11.47□□□□□ -0.57
PRKN-201ENST00000338468 CD7P09564 240 aa11.47□□□□□ -0.57
PRKN-201ENST00000338468 SNCAP37840 140 aa11.47□□□□□ -0.57
PRKN-201ENST00000338468 ZNF57Q68EA5 555 aaPredicted RBP11.47□□□□□ -0.57
PRKN-201ENST00000338468 BTNL8Q6UX41 500 aa11.47□□□□□ -0.57
PRKN-201ENST00000338468 MARC2Q969Z3 335 aa11.47□□□□□ -0.57
PRKN-201ENST00000338468 SLC25A21Q9BQT8 299 aaPredicted RBP11.47□□□□□ -0.57
PRKN-201ENST00000338468 FNDC4Q9H6D8 234 aaPredicted RBP11.47□□□□□ -0.57
PRKN-201ENST00000338468 MRPL36Q9P0J6 103 aaKnown RBP11.47□□□□□ -0.57
PRKN-201ENST00000338468 MRPL27Q9P0M9 148 aaKnown RBP11.47□□□□□ -0.57
PRKN-201ENST00000338468 SHPKQ9UHJ6 478 aa11.47□□□□□ -0.57
PRKN-201ENST00000338468 SULT1A3P0DMM9 295 aa11.46□□□□□ -0.57
PRKN-201ENST00000338468 SULT1A4P0DMN0 295 aa11.46□□□□□ -0.57
PRKN-201ENST00000338468 CCR6P51684 374 aa11.46□□□□□ -0.57
PRKN-201ENST00000338468 MLANAQ16655 118 aa11.46□□□□□ -0.57
PRKN-201ENST00000338468 ANKRD55Q3KP44 614 aa11.46□□□□□ -0.57
PRKN-201ENST00000338468 TMEM128Q5BJH2 165 aa11.46□□□□□ -0.57
PRKN-201ENST00000338468 GTSCR1Q86UQ5 136 aa11.46□□□□□ -0.57
PRKN-201ENST00000338468 LGI3Q8N145 548 aa11.46□□□□□ -0.57
PRKN-201ENST00000338468 TMEM170AQ8WVE7 144 aa11.46□□□□□ -0.57
PRKN-201ENST00000338468 K7EMT4 169 aa11.45□□□□□ -0.58
PRKN-201ENST00000338468 ZNF207O43670 478 aaKnown RBP11.45□□□□□ -0.58
PRKN-201ENST00000338468 NXPH3O95157 252 aa11.45□□□□□ -0.58
PRKN-201ENST00000338468 BTCP35070 178 aa11.45□□□□□ -0.58
PRKN-201ENST00000338468 CD81P60033 236 aa11.45□□□□□ -0.58
PRKN-201ENST00000338468 PPP1R1AQ13522 171 aa11.45□□□□□ -0.58
PRKN-201ENST00000338468 GUCA2BQ16661 112 aa11.45□□□□□ -0.58
PRKN-201ENST00000338468 NEURL2Q9BR09 285 aa11.45□□□□□ -0.58
PRKN-201ENST00000338468 WFDC10AQ9H1F0 79 aa11.45□□□□□ -0.58
PRKN-201ENST00000338468 ENY2Q9NPA8 101 aa11.45□□□□□ -0.58
PRKN-201ENST00000338468 DAZ1Q9NQZ3 744 aaKnown RBP11.45□□□□□ -0.58
PRKN-201ENST00000338468 GAR1Q9NY12 217 aaKnown RBP11.45□□□□□ -0.58
PRKN-201ENST00000338468 TENM2Q9NT68 2774 aa11.45□□□□□ -0.58
PRKN-201ENST00000338468 DYNC2H1Q8NCM8 4307 aaKnown RBP11.45□□□□□ -0.58
PRKN-201ENST00000338468 NUPL2O15504 423 aaKnown RBP11.44□□□□□ -0.58
PRKN-201ENST00000338468 ANXA3P12429 323 aa11.44□□□□□ -0.58
PRKN-201ENST00000338468 IL7P13232 177 aa11.44□□□□□ -0.58
PRKN-201ENST00000338468 SUB1P53999 127 aaKnown RBP eCLIP11.44□□□□□ -0.58
PRKN-201ENST00000338468 SRPXP78539 464 aa11.44□□□□□ -0.58
PRKN-201ENST00000338468 SMCO1Q147U7 214 aa11.44□□□□□ -0.58
PRKN-201ENST00000338468 RBMS2Q15434 407 aaKnown RBP11.44□□□□□ -0.58
PRKN-201ENST00000338468 CASC10Q5T4H9 136 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms