RNA–Protein interactions for RNA: ENST00000335183.10

CDKN3-202, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDKN3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-202ENST00000335183 TCF24Q7RTU0 167 aa17.88■□□□□ 0.45
CDKN3-202ENST00000335183 TBC1D26Q86UD7 250 aa17.88■□□□□ 0.45
CDKN3-202ENST00000335183 PRCDQ00LT1 54 aa17.87■□□□□ 0.45
CDKN3-202ENST00000335183 LPCAT3Q6P1A2 487 aa17.87■□□□□ 0.45
CDKN3-202ENST00000335183 LYSMD2Q8IV50 215 aa17.87■□□□□ 0.45
CDKN3-202ENST00000335183 SEC22AQ96IW7 307 aa17.87■□□□□ 0.45
CDKN3-202ENST00000335183 GINS3Q9BRX5 216 aa17.87■□□□□ 0.45
CDKN3-202ENST00000335183 C11orf68Q9H3H3 251 aaKnown RBP17.87■□□□□ 0.45
CDKN3-202ENST00000335183 DEFB4AO15263 64 aa17.86■□□□□ 0.45
CDKN3-202ENST00000335183 ST8SIA3O43173 380 aa17.86■□□□□ 0.45
CDKN3-202ENST00000335183 RPS19P39019 145 aaKnown RBP17.86■□□□□ 0.45
CDKN3-202ENST00000335183 ZNF114Q8NC26 417 aa17.86■□□□□ 0.45
CDKN3-202ENST00000335183 ST8SIA2Q92186 375 aa17.86■□□□□ 0.45
CDKN3-202ENST00000335183 MRGPRFQ96AM1 343 aa17.86■□□□□ 0.45
CDKN3-202ENST00000335183 FAM212BQ9NTI7 297 aaPredicted RBP17.86■□□□□ 0.45
CDKN3-202ENST00000335183 DNASE2O00115 360 aaPredicted RBP17.85■□□□□ 0.45
CDKN3-202ENST00000335183 IGKV1-39P01597 117 aa17.85■□□□□ 0.45
CDKN3-202ENST00000335183 IGKV1D-39P04432 117 aa17.85■□□□□ 0.45
CDKN3-202ENST00000335183 LSM3P62310 102 aaKnown RBP17.85■□□□□ 0.45
CDKN3-202ENST00000335183 ERHP84090 104 aaKnown RBP17.85■□□□□ 0.45
CDKN3-202ENST00000335183 SPINK9Q5DT21 86 aa17.85■□□□□ 0.45
CDKN3-202ENST00000335183 LEMD1Q68G75 181 aa17.85■□□□□ 0.45
CDKN3-202ENST00000335183 TOMM20LQ6UXN7 152 aa17.85■□□□□ 0.45
CDKN3-202ENST00000335183 IGHV3-66A0A0C4DH42 116 aa17.84■□□□□ 0.45
CDKN3-202ENST00000335183 APOHP02749 345 aaPredicted RBP17.84■□□□□ 0.45
CDKN3-202ENST00000335183 DEFB131AP59861 70 aa17.84■□□□□ 0.45
CDKN3-202ENST00000335183 HSPE1P61604 102 aaKnown RBP17.84■□□□□ 0.45
CDKN3-202ENST00000335183 RPL11P62913 178 aaKnown RBP17.84■□□□□ 0.45
CDKN3-202ENST00000335183 TMEM187Q14656 261 aa17.84■□□□□ 0.45
CDKN3-202ENST00000335183 MS4A6AQ9H2W1 248 aa17.84■□□□□ 0.45
CDKN3-202ENST00000335183 CD5P06127 495 aa17.83■□□□□ 0.44
CDKN3-202ENST00000335183 LILRB2Q8N423 598 aa17.83■□□□□ 0.44
CDKN3-202ENST00000335183 DFFBO76075 338 aa17.82■□□□□ 0.44
CDKN3-202ENST00000335183 NPBWR1P48145 328 aa17.82■□□□□ 0.44
CDKN3-202ENST00000335183 DUSP18Q8NEJ0 188 aa17.82■□□□□ 0.44
CDKN3-202ENST00000335183 GPX8Q8TED1 209 aa17.82■□□□□ 0.44
CDKN3-202ENST00000335183 C2CD4CQ8TF44 421 aa17.82■□□□□ 0.44
CDKN3-202ENST00000335183 VSIRQ9H7M9 311 aa17.82■□□□□ 0.44
CDKN3-202ENST00000335183 PUS1Q9Y606 427 aaKnown RBP eCLIP17.82■□□□□ 0.44
CDKN3-202ENST00000335183 AGRNO00468 2067 aa17.82■□□□□ 0.44
CDKN3-202ENST00000335183 IZUMO4Q1ZYL8 232 aa17.81■□□□□ 0.44
CDKN3-202ENST00000335183 ZNF600Q6ZNG1 722 aa17.81■□□□□ 0.44
CDKN3-202ENST00000335183 FAM24BQ8N5W8 94 aa17.81■□□□□ 0.44
CDKN3-202ENST00000335183 ZFAND3Q9H8U3 227 aa17.81■□□□□ 0.44
CDKN3-202ENST00000335183 RABAC1Q9UI14 185 aa17.81■□□□□ 0.44
CDKN3-202ENST00000335183 SNCAP37840 140 aa17.8■□□□□ 0.44
CDKN3-202ENST00000335183 PRR20EP86478 221 aa17.8■□□□□ 0.44
CDKN3-202ENST00000335183 PRR20CP86479 221 aa17.8■□□□□ 0.44
CDKN3-202ENST00000335183 PRR20DP86480 221 aa17.8■□□□□ 0.44
CDKN3-202ENST00000335183 PRR20BP86481 221 aa17.8■□□□□ 0.44
CDKN3-202ENST00000335183 PRR20AP86496 221 aa17.8■□□□□ 0.44
CDKN3-202ENST00000335183 KCTD21Q4G0X4 260 aa17.8■□□□□ 0.44
CDKN3-202ENST00000335183 SNX29P2Q8IUI4 249 aa17.8■□□□□ 0.44
CDKN3-202ENST00000335183 STHQ8IWL8 128 aa17.8■□□□□ 0.44
CDKN3-202ENST00000335183 DNAH10Q8IVF4 4471 aa17.8■□□□□ 0.44
CDKN3-202ENST00000335183 UCP3P55916 312 aa17.79■□□□□ 0.44
CDKN3-202ENST00000335183 SLC35G3Q8N808 338 aa17.79■□□□□ 0.44
CDKN3-202ENST00000335183 COMMD3Q9UBI1 195 aa17.79■□□□□ 0.44
CDKN3-202ENST00000335183 SMIM31A0A1B0GVY4 71 aa17.78■□□□□ 0.44
CDKN3-202ENST00000335183 TMEM231Q9H6L2 316 aa17.78■□□□□ 0.44
CDKN3-202ENST00000335183 TRAV2A0A0B4J234 112 aa17.77■□□□□ 0.44
CDKN3-202ENST00000335183 A0A1B0GU03 582 aa17.77■□□□□ 0.44
CDKN3-202ENST00000335183 IGLL5B9A064 214 aa17.77■□□□□ 0.44
CDKN3-202ENST00000335183 TMEM50AO95807 157 aa17.77■□□□□ 0.44
CDKN3-202ENST00000335183 RCVRNP35243 200 aa17.77■□□□□ 0.44
CDKN3-202ENST00000335183 TCTAP57738 103 aa17.77■□□□□ 0.44
CDKN3-202ENST00000335183 YIPF6Q96EC8 236 aa17.77■□□□□ 0.44
CDKN3-202ENST00000335183 SCPEP1Q9HB40 452 aa17.77■□□□□ 0.44
CDKN3-202ENST00000335183 M0QYG6 137 aa17.76■□□□□ 0.43
CDKN3-202ENST00000335183 IFNA17P01571 189 aa17.76■□□□□ 0.43
CDKN3-202ENST00000335183 PGAM2P15259 253 aa17.76■□□□□ 0.43
CDKN3-202ENST00000335183 AKR1C2P52895 323 aa17.76■□□□□ 0.43
CDKN3-202ENST00000335183 STXBP6Q8NFX7 210 aa17.76■□□□□ 0.43
CDKN3-202ENST00000335183 PDCD10Q9BUL8 212 aa17.76■□□□□ 0.43
CDKN3-202ENST00000335183 IGKV1-5P01602 117 aa17.75■□□□□ 0.43
CDKN3-202ENST00000335183 PI3P19957 117 aa17.75■□□□□ 0.43
CDKN3-202ENST00000335183 NPPCP23582 126 aa17.75■□□□□ 0.43
CDKN3-202ENST00000335183 Q8NAQ8 132 aa17.75■□□□□ 0.43
CDKN3-202ENST00000335183 APLNQ9ULZ1 77 aa17.75■□□□□ 0.43
CDKN3-202ENST00000335183 A0A1W2PS18 150 aa17.74■□□□□ 0.43
CDKN3-202ENST00000335183 C11orf94C9JXX5 98 aa17.74■□□□□ 0.43
CDKN3-202ENST00000335183 APOA1P02647 267 aa17.74■□□□□ 0.43
CDKN3-202ENST00000335183 HOXA1P49639 335 aaPredicted RBP17.74■□□□□ 0.43
CDKN3-202ENST00000335183 SUB1P53999 127 aaKnown RBP eCLIP17.74■□□□□ 0.43
CDKN3-202ENST00000335183 IGHV4-28A0A0C4DH34 117 aa17.73■□□□□ 0.43
CDKN3-202ENST00000335183 CORTO00230 105 aa17.73■□□□□ 0.43
CDKN3-202ENST00000335183 RNASE2P10153 161 aaKnown RBP17.73■□□□□ 0.43
CDKN3-202ENST00000335183 ETV6P41212 452 aa17.73■□□□□ 0.43
CDKN3-202ENST00000335183 PPP5CP53041 499 aa17.73■□□□□ 0.43
CDKN3-202ENST00000335183 RNASE12Q5GAN4 147 aaKnown RBP17.73■□□□□ 0.43
CDKN3-202ENST00000335183 METTL26Q96S19 204 aa17.73■□□□□ 0.43
CDKN3-202ENST00000335183 TP53RKQ96S44 253 aa17.73■□□□□ 0.43
CDKN3-202ENST00000335183 VCX3AQ9NNX9 186 aa17.73■□□□□ 0.43
CDKN3-202ENST00000335183 A0A0B4J293 547 aa17.72■□□□□ 0.43
CDKN3-202ENST00000335183 K7EQG2 157 aa17.72■□□□□ 0.43
CDKN3-202ENST00000335183 CLN5O75503 358 aa17.72■□□□□ 0.43
CDKN3-202ENST00000335183 ZNF688P0C7X2 276 aa17.72■□□□□ 0.43
CDKN3-202ENST00000335183 OPRK1P41145 380 aa17.72■□□□□ 0.43
CDKN3-202ENST00000335183 PIGPP57054 158 aa17.72■□□□□ 0.43
CDKN3-202ENST00000335183 RND3P61587 244 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms