RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 DLK1P80370 383 aa9.5□□□□□ -0.89
TRIM49B-201ENST00000332682 IFITM2Q01629 132 aa9.5□□□□□ -0.89
TRIM49B-201ENST00000332682 ZNF266Q14584 549 aa9.5□□□□□ -0.89
TRIM49B-201ENST00000332682 C19orf54Q5BKX5 351 aa9.5□□□□□ -0.89
TRIM49B-201ENST00000332682 UNQ5815/PRO19632Q6UWF5 114 aa9.5□□□□□ -0.89
TRIM49B-201ENST00000332682 UBAC2Q8NBM4 344 aa9.5□□□□□ -0.89
TRIM49B-201ENST00000332682 RNASEH2CQ8TDP1 164 aaKnown RBP9.5□□□□□ -0.89
TRIM49B-201ENST00000332682 ST8SIA2Q92186 375 aa9.5□□□□□ -0.89
TRIM49B-201ENST00000332682 TMEM147Q9BVK8 224 aa9.5□□□□□ -0.89
TRIM49B-201ENST00000332682 NPFFR1Q9GZQ6 430 aa9.5□□□□□ -0.89
TRIM49B-201ENST00000332682 WNT10AQ9GZT5 417 aa9.5□□□□□ -0.89
TRIM49B-201ENST00000332682 BORCS7-ASMTA0A0B4J1R7 106 aa9.49□□□□□ -0.89
TRIM49B-201ENST00000332682 UBE2L5PA0A1B0GUS4 154 aa9.49□□□□□ -0.89
TRIM49B-201ENST00000332682 CLDN34H7C241 214 aa9.49□□□□□ -0.89
TRIM49B-201ENST00000332682 CFDP00746 253 aaPredicted RBP9.49□□□□□ -0.89
TRIM49B-201ENST00000332682 UBA52P62987 128 aaKnown RBP9.49□□□□□ -0.89
TRIM49B-201ENST00000332682 CD69Q07108 199 aa9.49□□□□□ -0.89
TRIM49B-201ENST00000332682 ATP6V1FQ16864 119 aa9.49□□□□□ -0.89
TRIM49B-201ENST00000332682 AKIRIN2Q53H80 203 aa9.49□□□□□ -0.89
TRIM49B-201ENST00000332682 ARSJQ5FYB0 599 aaPredicted RBP9.49□□□□□ -0.89
TRIM49B-201ENST00000332682 FAM110DQ8TAY7 271 aaPredicted RBP9.49□□□□□ -0.89
TRIM49B-201ENST00000332682 TMEM68Q96MH6 324 aa9.49□□□□□ -0.89
TRIM49B-201ENST00000332682 GGACTQ9BVM4 153 aa9.49□□□□□ -0.89
TRIM49B-201ENST00000332682 ARV1Q9H2C2 271 aa9.49□□□□□ -0.89
TRIM49B-201ENST00000332682 FNDC4Q9H6D8 234 aaPredicted RBP9.49□□□□□ -0.89
TRIM49B-201ENST00000332682 UQCC1Q9NVA1 299 aa9.49□□□□□ -0.89
TRIM49B-201ENST00000332682 IGLV11-55A0A075B6I3 123 aa9.48□□□□□ -0.89
TRIM49B-201ENST00000332682 TRAV41A0A0B4J266 112 aa9.48□□□□□ -0.89
TRIM49B-201ENST00000332682 AP4M1O00189 453 aa9.48□□□□□ -0.89
TRIM49B-201ENST00000332682 CORTO00230 105 aa9.48□□□□□ -0.89
TRIM49B-201ENST00000332682 PRH1P02810 166 aa9.48□□□□□ -0.89
TRIM49B-201ENST00000332682 DEFA4P12838 97 aa9.48□□□□□ -0.89
TRIM49B-201ENST00000332682 TPT1P13693 172 aaKnown RBP9.48□□□□□ -0.89
TRIM49B-201ENST00000332682 TMEM95Q3KNT9 176 aa9.48□□□□□ -0.89
TRIM49B-201ENST00000332682 SLC16A13Q7RTY0 426 aa9.48□□□□□ -0.89
TRIM49B-201ENST00000332682 BAP18Q8IXM2 172 aa9.48□□□□□ -0.89
TRIM49B-201ENST00000332682 OR5T1Q8NG75 326 aa9.48□□□□□ -0.89
TRIM49B-201ENST00000332682 OR1L6Q8NGR2 347 aa9.48□□□□□ -0.89
TRIM49B-201ENST00000332682 MISP3Q96FF7 219 aa9.48□□□□□ -0.89
TRIM49B-201ENST00000332682 FANCD2OSQ96PS1 177 aa9.48□□□□□ -0.89
TRIM49B-201ENST00000332682 SLA2Q9H6Q3 261 aa9.48□□□□□ -0.89
TRIM49B-201ENST00000332682 ZNF702PQ9H963 129 aa9.48□□□□□ -0.89
TRIM49B-201ENST00000332682 LINC00527Q9UJ94 153 aa9.48□□□□□ -0.89
TRIM49B-201ENST00000332682 ZNF580Q9UK33 172 aa9.48□□□□□ -0.89
TRIM49B-201ENST00000332682 FNDC10F2Z333 226 aa9.47□□□□□ -0.89
TRIM49B-201ENST00000332682 TRIM77I1YAP6 450 aa9.47□□□□□ -0.89
TRIM49B-201ENST00000332682 SOX15O60248 233 aa9.47□□□□□ -0.89
TRIM49B-201ENST00000332682 GPX4P36969 197 aaPredicted RBP9.47□□□□□ -0.89
TRIM49B-201ENST00000332682 OPRK1P41145 380 aa9.47□□□□□ -0.89
TRIM49B-201ENST00000332682 HILS1P60008 231 aa9.47□□□□□ -0.89
TRIM49B-201ENST00000332682 MLANAQ16655 118 aa9.47□□□□□ -0.89
TRIM49B-201ENST00000332682 SLC25A24Q6NUK1 477 aa9.47□□□□□ -0.89
TRIM49B-201ENST00000332682 TEX261Q6UWH6 196 aa9.47□□□□□ -0.89
TRIM49B-201ENST00000332682 HSD17B11Q8NBQ5 300 aa9.47□□□□□ -0.89
TRIM49B-201ENST00000332682 ZNF418Q8TF45 676 aaPredicted RBP9.47□□□□□ -0.89
TRIM49B-201ENST00000332682 CACNG8Q8WXS5 425 aa9.47□□□□□ -0.89
TRIM49B-201ENST00000332682 NOL4LQ96MY1 436 aaPredicted RBP9.47□□□□□ -0.89
TRIM49B-201ENST00000332682 GINS3Q9BRX5 216 aa9.47□□□□□ -0.89
TRIM49B-201ENST00000332682 PARD6GQ9BYG4 376 aaPredicted RBP9.47□□□□□ -0.89
TRIM49B-201ENST00000332682 PRSS22Q9GZN4 317 aa9.47□□□□□ -0.89
TRIM49B-201ENST00000332682 WDR61Q9GZS3 305 aaKnown RBP9.47□□□□□ -0.89
TRIM49B-201ENST00000332682 WDR83OSQ9Y284 106 aa9.47□□□□□ -0.89
TRIM49B-201ENST00000332682 SMCO3A2RU48 225 aa9.46□□□□□ -0.89
TRIM49B-201ENST00000332682 FAM181BA6NEQ2 426 aa9.46□□□□□ -0.89
TRIM49B-201ENST00000332682 I3L2K1 104 aa9.46□□□□□ -0.89
TRIM49B-201ENST00000332682 MT-CO2P00403 227 aa9.46□□□□□ -0.89
TRIM49B-201ENST00000332682 IFNA5P01569 189 aa9.46□□□□□ -0.89
TRIM49B-201ENST00000332682 FAM157CP0CG43 387 aa9.46□□□□□ -0.89
TRIM49B-201ENST00000332682 MDKP21741 143 aaPredicted RBP9.46□□□□□ -0.89
TRIM49B-201ENST00000332682 EIF5AP63241 154 aaKnown RBP9.46□□□□□ -0.89
TRIM49B-201ENST00000332682 RUNX1Q01196 453 aa9.46□□□□□ -0.89
TRIM49B-201ENST00000332682 EXOSC2Q13868 293 aaKnown RBP9.46□□□□□ -0.89
TRIM49B-201ENST00000332682 GAMTQ14353 236 aa9.46□□□□□ -0.89
TRIM49B-201ENST00000332682 KLK9Q2XQG4 91 aa9.46□□□□□ -0.89
TRIM49B-201ENST00000332682 TREML4Q6UXN2 200 aa9.46□□□□□ -0.89
TRIM49B-201ENST00000332682 Q8N2B8 174 aa9.46□□□□□ -0.89
TRIM49B-201ENST00000332682 MRPL36Q9P0J6 103 aaKnown RBP9.46□□□□□ -0.89
TRIM49B-201ENST00000332682 KLK9Q9UKQ9 250 aa9.46□□□□□ -0.89
TRIM49B-201ENST00000332682 K7EIM0 57 aa9.46□□□□□ -0.9
TRIM49B-201ENST00000332682 CRLF1O75462 422 aa9.46□□□□□ -0.9
TRIM49B-201ENST00000332682 IGHV3-48P01763 117 aa9.46□□□□□ -0.9
TRIM49B-201ENST00000332682 RNASE1P07998 156 aaKnown RBP9.46□□□□□ -0.9
TRIM49B-201ENST00000332682 PPIFP30405 207 aaKnown RBP9.46□□□□□ -0.9
TRIM49B-201ENST00000332682 CFHR3Q02985 330 aa9.46□□□□□ -0.9
TRIM49B-201ENST00000332682 AKR1C1Q04828 323 aa9.46□□□□□ -0.9
TRIM49B-201ENST00000332682 ETFRF1Q6IPR1 90 aa9.46□□□□□ -0.9
TRIM49B-201ENST00000332682 ALKAL2Q6UX46 152 aa9.46□□□□□ -0.9
TRIM49B-201ENST00000332682 ZNF680Q8NEM1 530 aa9.46□□□□□ -0.9
TRIM49B-201ENST00000332682 TAF15Q92804 592 aaKnown RBP eCLIP9.46□□□□□ -0.9
TRIM49B-201ENST00000332682 PHYHIPLQ96FC7 376 aa9.46□□□□□ -0.9
TRIM49B-201ENST00000332682 SH3BGRL3Q9H299 93 aa9.46□□□□□ -0.9
TRIM49B-201ENST00000332682 LSM4Q9Y4Z0 139 aaKnown RBP9.46□□□□□ -0.9
TRIM49B-201ENST00000332682 TRBV9A0A0B4J1U6 114 aa9.45□□□□□ -0.9
TRIM49B-201ENST00000332682 IGHV3-21A0A0B4J1V1 117 aa9.45□□□□□ -0.9
TRIM49B-201ENST00000332682 RPS10-NUDT3A0A1W2PQS6 291 aa9.45□□□□□ -0.9
TRIM49B-201ENST00000332682 RGS13O14921 159 aa9.45□□□□□ -0.9
TRIM49B-201ENST00000332682 CYB5BO43169 146 aa9.45□□□□□ -0.9
TRIM49B-201ENST00000332682 SPP1P10451 314 aa9.45□□□□□ -0.9
TRIM49B-201ENST00000332682 FGF7P21781 194 aa9.45□□□□□ -0.9
TRIM49B-201ENST00000332682 ATP6V0CP27449 155 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms