RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 PPIHO43447 177 aaKnown RBP13.7□□□□□ -0.22
SFXN1-201ENST00000321442 PRB4P10163 310 aaPredicted RBP13.7□□□□□ -0.22
SFXN1-201ENST00000321442 C9orf106Q8NAJ2 232 aa13.7□□□□□ -0.22
SFXN1-201ENST00000321442 KLF2Q9Y5W3 355 aaPredicted RBP13.7□□□□□ -0.22
SFXN1-201ENST00000321442 FOXF2Q12947 444 aa13.7□□□□□ -0.22
SFXN1-201ENST00000321442 ACSF3Q4G176 576 aaPredicted RBP13.7□□□□□ -0.22
SFXN1-201ENST00000321442 WDR83OSQ9Y284 106 aa13.7□□□□□ -0.22
SFXN1-201ENST00000321442 GNB2P62879 340 aa13.69□□□□□ -0.22
SFXN1-201ENST00000321442 LY6DQ14210 128 aa13.69□□□□□ -0.22
SFXN1-201ENST00000321442 C19orf35Q6ZS72 473 aa13.69□□□□□ -0.22
SFXN1-201ENST00000321442 PLA2G2EQ9NZK7 142 aa13.69□□□□□ -0.22
SFXN1-201ENST00000321442 HSPB7Q9UBY9 170 aa13.69□□□□□ -0.22
SFXN1-201ENST00000321442 YLPM1P49750 1951 aaKnown RBP13.69□□□□□ -0.22
SFXN1-201ENST00000321442 IGKV1-6A0A0C4DH72 117 aa13.69□□□□□ -0.22
SFXN1-201ENST00000321442 CLDN18P56856 261 aa13.69□□□□□ -0.22
SFXN1-201ENST00000321442 ZNF497Q6ZNH5 498 aa13.69□□□□□ -0.22
SFXN1-201ENST00000321442 ZNF430Q9H8G1 570 aaPredicted RBP13.69□□□□□ -0.22
SFXN1-201ENST00000321442 TRANK1O15050 2925 aa13.69□□□□□ -0.22
SFXN1-201ENST00000321442 EYSQ5T1H1 3165 aa13.69□□□□□ -0.22
SFXN1-201ENST00000321442 RBFOX2O43251 390 aaKnown RBP eCLIP13.69□□□□□ -0.22
SFXN1-201ENST00000321442 OR9G9P0C7N8 305 aa13.69□□□□□ -0.22
SFXN1-201ENST00000321442 TIMP3P35625 211 aa13.69□□□□□ -0.22
SFXN1-201ENST00000321442 SRSF12Q8WXF0 261 aaKnown RBP13.69□□□□□ -0.22
SFXN1-201ENST00000321442 CHD3Q12873 2000 aaKnown RBP13.69□□□□□ -0.22
SFXN1-201ENST00000321442 RPL27AP46776 148 aaKnown RBP13.69□□□□□ -0.22
SFXN1-201ENST00000321442 RNFT1Q5M7Z0 435 aa13.69□□□□□ -0.22
SFXN1-201ENST00000321442 C12orf54Q6X4T0 127 aa13.69□□□□□ -0.22
SFXN1-201ENST00000321442 GGNQ86UU5 652 aa13.69□□□□□ -0.22
SFXN1-201ENST00000321442 SPRR3Q9UBC9 169 aa13.69□□□□□ -0.22
SFXN1-201ENST00000321442 LINC01560Q8TB33 94 aa13.68□□□□□ -0.22
SFXN1-201ENST00000321442 EAF1Q96JC9 268 aaPredicted RBP13.68□□□□□ -0.22
SFXN1-201ENST00000321442 SELENOTP62341 195 aa13.68□□□□□ -0.22
SFXN1-201ENST00000321442 RSPO1Q2MKA7 263 aaPredicted RBP13.68□□□□□ -0.22
SFXN1-201ENST00000321442 TMEM42Q69YG0 159 aa13.68□□□□□ -0.22
SFXN1-201ENST00000321442 PRDM13Q9H4Q3 707 aa13.68□□□□□ -0.22
SFXN1-201ENST00000321442 TRBV9A0A0B4J1U6 114 aa13.68□□□□□ -0.22
SFXN1-201ENST00000321442 CECR9P0C854 216 aa13.68□□□□□ -0.22
SFXN1-201ENST00000321442 ANOS1P23352 680 aa13.68□□□□□ -0.22
SFXN1-201ENST00000321442 ASCL5Q7RTU5 278 aa13.68□□□□□ -0.22
SFXN1-201ENST00000321442 SEMA5BQ9P283 1151 aa13.68□□□□□ -0.22
SFXN1-201ENST00000321442 USP9YO00507 2555 aaPredicted RBP13.67□□□□□ -0.22
SFXN1-201ENST00000321442 A8MWP6 167 aa13.67□□□□□ -0.22
SFXN1-201ENST00000321442 BTF3P20290 206 aaKnown RBP13.67□□□□□ -0.22
SFXN1-201ENST00000321442 C1orf185Q5T7R7 199 aa13.67□□□□□ -0.22
SFXN1-201ENST00000321442 TMEM70Q9BUB7 260 aa13.67□□□□□ -0.22
SFXN1-201ENST00000321442 CFAP54Q96N23 3096 aa13.67□□□□□ -0.22
SFXN1-201ENST00000321442 MUC21A0A0G2JKD1 596 aa13.67□□□□□ -0.22
SFXN1-201ENST00000321442 MUC21A0A140T8X8 626 aa13.67□□□□□ -0.22
SFXN1-201ENST00000321442 A6NDN8 102 aa13.67□□□□□ -0.22
SFXN1-201ENST00000321442 OR4C46A6NHA9 309 aa13.67□□□□□ -0.22
SFXN1-201ENST00000321442 PRRX1P54821 245 aa13.67□□□□□ -0.22
SFXN1-201ENST00000321442 MUC21Q5SSG8 566 aa13.67□□□□□ -0.22
SFXN1-201ENST00000321442 SPATA31B1PQ5VZV4 182 aa13.67□□□□□ -0.22
SFXN1-201ENST00000321442 EPG5Q9HCE0 2579 aa13.67□□□□□ -0.22
SFXN1-201ENST00000321442 EFNB3Q15768 340 aa13.67□□□□□ -0.22
SFXN1-201ENST00000321442 PAX9P55771 341 aa13.66□□□□□ -0.22
SFXN1-201ENST00000321442 C1orf194Q5T5A4 169 aa13.66□□□□□ -0.22
SFXN1-201ENST00000321442 GOLT1AQ6ZVE7 132 aa13.66□□□□□ -0.22
SFXN1-201ENST00000321442 ANAPC10Q9UM13 185 aa13.66□□□□□ -0.22
SFXN1-201ENST00000321442 HIGD1AQ9Y241 93 aa13.66□□□□□ -0.22
SFXN1-201ENST00000321442 AHRRA9YTQ3 701 aa13.66□□□□□ -0.22
SFXN1-201ENST00000321442 LCN12Q6JVE5 192 aa13.66□□□□□ -0.22
SFXN1-201ENST00000321442 TMEM14EPQ6UXP3 125 aa13.66□□□□□ -0.22
SFXN1-201ENST00000321442 ZNF714Q96N38 554 aa13.66□□□□□ -0.22
SFXN1-201ENST00000321442 C2orf88Q9BSF0 95 aa13.66□□□□□ -0.22
SFXN1-201ENST00000321442 MRPL37Q9BZE1 423 aaKnown RBP13.66□□□□□ -0.22
SFXN1-201ENST00000321442 SEPSECSQ9HD40 501 aaKnown RBP13.66□□□□□ -0.22
SFXN1-201ENST00000321442 IGKV3-7A0A075B6H7 116 aa13.66□□□□□ -0.22
SFXN1-201ENST00000321442 PFN1P07737 140 aaKnown RBP13.66□□□□□ -0.22
SFXN1-201ENST00000321442 TREML4Q6UXN2 200 aa13.66□□□□□ -0.22
SFXN1-201ENST00000321442 TMEM116Q8NCL8 245 aa13.66□□□□□ -0.22
SFXN1-201ENST00000321442 IGHV3-35A0A0C4DH35 117 aa13.66□□□□□ -0.22
SFXN1-201ENST00000321442 CD3EP07766 207 aa13.66□□□□□ -0.22
SFXN1-201ENST00000321442 PRB3Q04118 309 aaPredicted RBP13.66□□□□□ -0.22
SFXN1-201ENST00000321442 LINC00305Q7Z4B0 112 aa13.66□□□□□ -0.22
SFXN1-201ENST00000321442 GCSAMQ8N6F7 178 aa13.66□□□□□ -0.22
SFXN1-201ENST00000321442 FAM216BQ8N7L0 139 aa13.65□□□□□ -0.22
SFXN1-201ENST00000321442 F11RQ9Y624 299 aaKnown RBP13.65□□□□□ -0.22
SFXN1-201ENST00000321442 PPIAL4EA0A075B759 164 aa13.65□□□□□ -0.22
SFXN1-201ENST00000321442 HIGD1CA8MV81 97 aa13.65□□□□□ -0.22
SFXN1-201ENST00000321442 PPIAL4DF5H284 164 aa13.65□□□□□ -0.22
SFXN1-201ENST00000321442 PPIAL4FP0DN26 164 aa13.65□□□□□ -0.22
SFXN1-201ENST00000321442 FAM53AQ6NSI3 398 aaPredicted RBP13.65□□□□□ -0.22
SFXN1-201ENST00000321442 PPIAL4AQ9Y536 164 aa13.65□□□□□ -0.22
SFXN1-201ENST00000321442 HLA-DRB1P01911 266 aa13.65□□□□□ -0.22
SFXN1-201ENST00000321442 CD40P25942 277 aa13.65□□□□□ -0.22
SFXN1-201ENST00000321442 ZNF146Q15072 292 aa13.65□□□□□ -0.22
SFXN1-201ENST00000321442 NRN1LQ496H8 165 aa13.65□□□□□ -0.22
SFXN1-201ENST00000321442 OR9G1Q8NH87 305 aa13.65□□□□□ -0.22
SFXN1-201ENST00000321442 DLEU1O43261 78 aa13.64□□□□□ -0.23
SFXN1-201ENST00000321442 PYYP10082 97 aa13.64□□□□□ -0.23
SFXN1-201ENST00000321442 SNRNP40Q96DI7 357 aaKnown RBP13.64□□□□□ -0.23
SFXN1-201ENST00000321442 GGTLC1Q9BX51 225 aa13.64□□□□□ -0.23
SFXN1-201ENST00000321442 IDI2-AS1Q9NZ38 188 aa13.64□□□□□ -0.23
SFXN1-201ENST00000321442 FASNP49327 2511 aaKnown RBP13.64□□□□□ -0.23
SFXN1-201ENST00000321442 TNCP24821 2201 aa13.64□□□□□ -0.23
SFXN1-201ENST00000321442 IGHV1-2P23083 117 aa13.64□□□□□ -0.23
SFXN1-201ENST00000321442 TBR1Q16650 682 aa13.64□□□□□ -0.23
SFXN1-201ENST00000321442 Q6ZT83 130 aa13.64□□□□□ -0.23
SFXN1-201ENST00000321442 TCF24Q7RTU0 167 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms